Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12290
- Subject:
- XM_011521781.3
- Aligned Length:
- 5142
- Identities:
- 1289
- Gaps:
- 3852
Alignment
Query 1 ATGGCGGTGGCCGAGCTGTACACGCAGTACAACAGGGTCTGGATTCCCGATCCTGAAGAAGTTTGGAAGTCTGC 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCGGTGGCCGAGCTGTACACGCAGTACAACAGGGTCTGGATTCCCGATCCTGAAGAAGTTTGGAAGTCTGC 74
Query 75 TGAAATAGCCAAGGACTACAGAGTTGGTGACAAGGTCCTGCGACTCCTGCTGGAGGATGGAACGGAGCTGGATT 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TGAAATAGCCAAGGACTACAGAGTTGGTGACAAGGTCCTGCGACTCCTGCTGGAGGATGGAACGGAGCTGGATT 148
Query 149 ATTCTGTCAATCCAGAATCTCTGCCTCCACTTCGGAATCCTGACATCCTCGTGGGCGAGAATGACCTCACGGCT 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ATTCTGTCAATCCAGAATCTCTGCCTCCACTTCGGAATCCTGACATCCTCGTGGGCGAGAATGACCTCACGGCT 222
Query 223 CTCAGCTATCTTCACGAGCCCGCGGTGCTCCACAACCTCAGAATCCGCTTTGCAGAATCCAAACTCATTTACAC 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CTCAGCTATCTTCACGAGCCCGCGGTGCTCCACAACCTCAGAATCCGCTTTGCAGAATCCAAACTCATTTACAC 296
Query 297 CTACAGTGGAATCATTTTGGTGGCCATGAATCCTTACAAGCAGTTGCCAATATACGGAGATGCCATCATCCACG 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CTACAGTGGAATCATTTTGGTGGCCATGAATCCTTACAAGCAGTTGCCAATATACGGAGATGCCATCATCCACG 370
Query 371 CCTACAGCGGGCAGAACATGGGCGATATGGACCCACACATATTTGCCGTGGCAGAAGAGGCATACAAGCAGATG 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CCTACAGCGGGCAGAACATGGGCGATATGGACCCACACATATTTGCCGTGGCAGAAGAGGCATACAAGCAGATG 444
Query 445 GCCAGAAACAACAGAAACCAGTCCATAATTGTAAGTGGGGAGTCAGGTGCTGGAAAGACAGTGTCGGCTCGCTA 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GCCAGAAACAACAGAAACCAGTCCATAATTGTAAGTGGGGAGTCAGGTGCTGGAAAGACAGTGTCGGCTCGCTA 518
Query 519 TGCCATGAGGTACTTTGCCACCGTCAGCAAATCGGGCAGCAACGCTCACGTGGAAGACAAGGTCCTGGCATCCA 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGCCATGAGGTACTTTGCCACCGTCAGCAAATCGGGCAGCAACGCTCACGTGGAAGACAAGGTCCTGGCATCCA 592
Query 593 ATCCCATCACCGAGGCCGTTGGAAATGCCAAGACCACCCGCAATGACAATAGTAGTCGGTTTGGGAAATACACA 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ATCCCATCACCGAGGCCGTTGGAAATGCCAAGACCACCCGCAATGACAATAGTAGTCGGTTTGGGAAATACACA 666
Query 667 GAAATCAGTTTTGATGAACAAAATCAAATTATAGGAGCCAACATGAGCACTTACCTCCTGGAGAAATCCAGAGT 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GAAATCAGTTTTGATGAACAAAATCAAATTATAGGAGCCAACATGAGCACTTACCTCCTGGAGAAATCCAGAGT 740
Query 741 TGTCTTTCAATCGGAAAATGAACGAAATTACCACATTTTCTATCAGCTTTGTGCATCTGCACAGCAGTCGGAAT 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TGTCTTTCAATCGGAAAATGAACGAAATTACCACATTTTCTATCAGCTTTGTGCATCTGCACAGCAGTCGGAAT 814
Query 815 TTAAACATCTTAAATTGGGGAGTGCCGAAGAATTTAATTATACAAGAATGGGAGGCAATACTGTCATTGAGGGT 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TTAAACATCTTAAATTGGGGAGTGCCGAAGAATTTAATTATACAAGAATGGGAGGCAATACTGTCATTGAGGGT 888
Query 889 GTGAATGATCGAGCTGAAATGGTAGAGACTCAAAAGACCTTCACGCTTCTGGGTTTCAAGGAGGATTTTCAGAT 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GTGAATGATCGAGCTGAAATGGTAGAGACTCAAAAGACCTTCACGCTTCTGGGTTTCAAGGAGGATTTTCAGAT 962
Query 963 GGACGTTTTTAAAATCCTGGCAGCCATCCTACATCTGGGCAACGTGCAGATCACCGCGGTGGGCAACGAGAGGT 1036
||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||
Sbjct 963 GGACGTTTTTAAAATCCTGGCAGCCATCCTACATCTGGGCAATGTGCAGATCACCGCGGTGGGCAACGAGAGGT 1036
Query 1037 CCTCAGTTAGTGAGGATGACAGTCACCTGAAGGTGTTCTGTGAGCTCCTGGGCCTGGAGAGTGGCAGAGTTGCT 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CCTCAGTTAGTGAGGATGACAGTCACCTGAAGGTGTTCTGTGAGCTCCTGGGCCTGGAGAGTGGCAGAGTTGCT 1110
Query 1111 CAGTGGCTGTGCAATCGCAAAATCGTCACAAGCTCTGAGACGGTGGTAAAACCCATGACCAGGCCTCAGGCTGT 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CAGTGGCTGTGCAATCGCAAAATCGTCACAAGCTCTGAGACGGTGGTAAAACCCATGACCAGGCCTCAGGCTGT 1184
Query 1185 CAACGCCAGGGATGCACTGGCCAAAAAGATCTATGCTCACCTGTTCGACTTCATTGTGGAGAGAATTAACCAAG 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CAACGCCAGGGATGCACTGGCCAAAAAGATCTATGCTCACCTGTTCGACTTCATTGTGGAGAGAATTAACCAAG 1258
Query 1259 CGTTGCAGTTTTCA----------------------------------------GTTTTGAAACCTTTGATG-- 1290
|||||||||||||| ||||||||||||||||||
Sbjct 1259 CGTTGCAGTTTTCAGGCAAGCAGCACACTTTTATTGGTGTTTTGGACATTTATGGTTTTGAAACCTTTGATGTG 1332
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 1333 AACAGCTTTGAACAATTTTGCATCAATTACGCTAATGAAAAACTGCAACAACAGTTTAACATGCATGTCTTCAA 1406
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 1407 ACTGGAACAAGAAGAATACATGAAGGAAGATATACCTTGGACGCTGATAGATTTTTATGACAATCAACCAGTTA 1480
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 1481 TTGACCTGATTGAAGCAAAAATGGGAATTCTGGAGTTACTGGATGAAGAATGTTTGTTACCACATGGAACTGAT 1554
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 1555 GAAAACTGGCTTCAAAAGCTGTATAATAATTTTGTCAACAGGAACCCTTTGTTTGAAAAGCCTAGAATGTCAAA 1628
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 1629 CACATCCTTTGTCATCCAGCACTTTGCTGATAAGGTAGAGTATAAATGTGAAGGTTTCCTGGAGAAAAACAGAG 1702
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 1703 ACACCGTCTATGACATGCTGGTTGAAATCCTGAGAGCAAGCAAGTTTCATCTCTGTGCCAACTTTTTTCAAGAA 1776
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 1777 AATCCAACTCCTCCTTCTCCTTTTGGTTCAATGATTACAGTTAAATCTGCAAAGCAAGTCATCAAGCCAAACAG 1850
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 1851 CAAGCATTTCCGGACCACAGTTGGGAGCAAGTTCCGCAGCTCTCTGTACTTGCTCATGGAGACCCTCAATGCGA 1924
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 1925 CGACGCCCCACTACGTTCGATGCATCAAGCCAAATGATGAGAAGTTACCCTTTGAATTTGACTCCAAAAGAATT 1998
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 1999 GTTCAGCAGCTGCGAGCCTGCGGCGTTTTAGAAACGATTCGCATTAGTGCACAGAGCTACCCTTCCAGGTGGAC 2072
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2073 ATACATCGAGTTCTACAGTCGCTACGGCATTCTCATGACCAAGCAAGAGCTTTCCTTCAGCGATAAAAAGGAGG 2146
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2147 TGTGCAAGGTGGTTTTACACAGACTCATCCAGGATTCTAATCAGTACCAGTTTGGTAAAACCAAAATTTTCTTC 2220
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2221 AGAGCAGGACAAGTGGCTTATTTAGAGAAACTTCGATTGGATAAACTGAGGCAGAGTTGTGTTATGGTACAAAA 2294
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2295 GCACATGCGTGGCTGGCTCCAGAGGAAAAAATTCCTCCGAGAGAGACGAGCCGCCCTGATAATCCAGCAGTACT 2368
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2369 TCCGGGGTCAGCAAACTGTGAGCCTGTATCAGTTGATTCGCATGGCCACCATCACAATGCAGGCCTACAGCCGA 2442
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2443 GGATTCCTGGCAAGGAGGAGGTATCGAAAGATGCTGGAGGAACATAAGGCTGTGATCCTACAGAAATACGCACG 2516
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2517 GGCGTGGCTGGCCAGACGCAGATTCCAGAGTATCCGACGATTCGTGCTTAATATTCAGCTTACTTACAGGGTCC 2590
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2591 AGCGTTTGCAGAAAAAGTTGGAAGATCAGAACAAAGAAAACCATGGGCTGGTGGAGAAGCTGACTAGCCTGGCT 2664
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2665 GCTCTTCGAGCTGGGGATGTGGAAAAGATTCAGAAGCTGGAAGCAGAACTAGAAAAAGCAGCCACTCACAGGCG 2738
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2739 AAATTACGAGGAGAAGGGGAAGAGATACAGGGATGCTGTGGAAGAGAAATTGGCAAAGCTTCAGAAGCATAATT 2812
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2813 CAGAACTGGAAACACAGAAAGAACAAATACAGCTGAAGCTTCAAGAGAAGACTGAAGAGTTAAAAGAAAAAATG 2886
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2887 GACAACCTCACCAAGCAGCTCTTTGATGATGTACAAAAGGAAGAACGGCAAAGAATGCTTCTTGAAAAAAGTTT 2960
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2961 TGAACTGAAAACACAAGACTATGAGAAGCAGATTCAGTCTTTGAAAGAAGAAATTAAAGCTCTCAAGGATGAGA 3034
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 3035 AGATGCAACTCCAACACCTGGTGGAGGGGGAGCACGTCACTTCTGATGGCTTGAAGGCGGAAGTGGCCCGCCTG 3108
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 3109 AGCAAGCAGGTCAAGACAATCTCTGAGTTCGAAAAAGAGATAGAACTACTTCAGGCACAGAAGATAGATGTGGA 3182
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 3183 GAAACATGTGCAGTCACAAAAACGGGAAATGAGAGAAAAGATGTCAGAGATCACCAAACAACTTCTCGAAAGCT 3256
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 3257 ATGACATTGAAGATGTAAGAAGCAGGCTCTCTGTGGAAGATCTGGAACATTTAAATGAGGATGGAGAACTTTGG 3330
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 3331 TTTGCTTATGAAGGACTAAAGAAAGCAACACGTGTTTTGGAGAGCCATTTCCAGTCTCAGAAGGATTGCTATGA 3404
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 3405 AAAGGAGATTGAAGCTTTGAACTTCAAAGTGGTGCATCTCAGTCAAGAAATCAACCACCTGCAGAAGTTATTCA 3478
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 3479 GAGAAGAAAATGACATCAATGAAAGCATCCGTCATGAAGTTACCAGGCTAACATCAGAGAACATGATGATCCCA 3552
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 3553 GACTTTAAACAGCAAATTTCAGAATTGGAGAAACAGAAGCAAGATCTTGAAATCCGCCTGAATGAACAAGCTGA 3626
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 3627 GAAAATGAAAGGAAAACTAGAAGAATTGTCTAATCAGTTACATCGCAGTCAAGAGGAGGAAGGAACACAAAGAA 3700
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 3701 AGGCCTTGGAAGCCCAAAATGAAATACATACCAAAGAGAAGGAGAAGCTGATTGATAAGATTCAAGAAATGCAG 3774
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 3775 GAGGCCAGTGACCACTTGAAGAAACAATTTGAAACTGAAAGTGAAGTCAAGTGTAACTTCCGGCAGGAAGCATC 3848
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 3849 CCGGCTCACTTTGGAAAACAGGGATCTTGAAGAAGAATTAGACATGAAAGACAGAGTGATTAAAAAGCTACAAG 3922
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 3923 ATCAAGTCAAGACACTAAGCAAGACAATTGGAAAAGCCAATGATGTGCACTCGTCCTCAGGACCCAAGGAGTAC 3996
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 3997 CTTGGAATGCTGCAATACAAGAGAGAAGACGAGGCCAAGCTCATTCAGAACCTCATTCTTGACTTGAAGCCCCG 4070
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 4071 TGGCGTGGTGGTGAACATGATCCCCGGGCTGCCGGCTCATATCCTGTTCATGTGTGTGCGCTACGCAGACTCTC 4144
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 4145 TGAATGATGCCAACATGCTGAAGTCCCTCATGAACAGCACCATTAATGGCATCAAGCAGGTGGTTAAGGAACAT 4218
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 4219 TTAGAAGACTTTGAAATGCTGTCCTTTTGGCTTTCCAACACTTGTCATTTTCTCAATTGCCTGAAGCAGTACAG 4292
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 4293 CGGAGAAGAGGAATTCATGAAGCATAATAGTCCACAGCAGAATAAGAATTGCTTGAACAATTTTGACCTTTCAG 4366
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 4367 AATACAGACAGATTCTCAGTGATGTGGCTATACGAATATATCATCAATTTATTATCATAATGGAAAAGAATATC 4440
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 4441 CAACCGATAATAGTTCCGGGAATGCTGGAGTATGAGAGCCTGCAGGGCATTTCCGGCCTGAAGCCCACAGGCTT 4514
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 4515 CCGGAAGCGCTCCTCTAGCATAGACGACACGGACGGCTACACCATGACCTCCGTCCTGCAACAGCTGAGCTACT 4588
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 4589 TTTACACCACCATGTGCCAGAACGGCCTGGACCCCGAGCTTGTGAGGCAGGCGGTGAAGCAGCTCTTCTTCTTG 4662
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 4663 ATCGGGGCGGTCACGCTGAACAGCCTCTTCCTGCGCAAGGACATGTGCTCCTGCAGAAAAGGGATGCAGATCAG 4736
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 4737 GTGCAATATCAGCTACTTAGAAGAATGGCTTAAAGATAAGAACTTGCAGAACAGCTTAGCAAAGGAAACTTTGG 4810
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 4811 AGCCCCTCTCTCAGGCAGCCTGGTTGCTTCAGGTCAAGAAGACCACAGACAGTGATGCCAAGGAGATCTACGAA 4884
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 4885 CGCTGCACCTCACTGTCTGCTGTGCAGATCATAAAGATCCTTAATTCATACACACCTATAGATGACTTTGAGAA 4958
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 4959 GAGAGTGACTCCATCCTTTGTTCGCAAAGTACAGGCTCTCCTAAATAGCCGGGAGGATTCATCACAGCTGATGT 5032
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 5033 TGGATACCAAATATCTCTTTCAAGTCACATTTCCTTTTACCCCCTCTCCACATGCTCTGGAAATGATTCAGATC 5106
Query 1291 ------------------------------------ 1290
Sbjct 5107 CCCAGCAGTTTCAAGCTAGGCTTTCTGAATAGGTTA 5142
