Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12290
- Subject:
- XM_017022408.2
- Aligned Length:
- 5091
- Identities:
- 1289
- Gaps:
- 3801
Alignment
Query 1 ATGGCGGTGGCCGAGCTGTACACGCAGTACAACAGGGTCTGGATTCCCGATCCTGAAGAAGTTTGGAAGTCTGC 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCGGTGGCCGAGCTGTACACGCAGTACAACAGGGTCTGGATTCCCGATCCTGAAGAAGTTTGGAAGTCTGC 74
Query 75 TGAAATAGCCAAGGACTACAGAGTTGGTGACAAGGTCCTGCGACTCCTGCTGGAGGATGGAACGGAGCTGGATT 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TGAAATAGCCAAGGACTACAGAGTTGGTGACAAGGTCCTGCGACTCCTGCTGGAGGATGGAACGGAGCTGGATT 148
Query 149 ATTCTGTCAATCCAGAATCTCTGCCTCCACTTCGGAATCCTGACATCCTCGTGGGCGAGAATGACCTCACGGCT 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ATTCTGTCAATCCAGAATCTCTGCCTCCACTTCGGAATCCTGACATCCTCGTGGGCGAGAATGACCTCACGGCT 222
Query 223 CTCAGCTATCTTCACGAGCCCGCGGTGCTCCACAACCTCAGAATCCGCTTTGCAGAATCCAAACTCATTTACAC 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CTCAGCTATCTTCACGAGCCCGCGGTGCTCCACAACCTCAGAATCCGCTTTGCAGAATCCAAACTCATTTACAC 296
Query 297 CTACAGTGGAATCATTTTGGTGGCCATGAATCCTTACAAGCAGTTGCCAATATACGGAGATGCCATCATCCACG 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CTACAGTGGAATCATTTTGGTGGCCATGAATCCTTACAAGCAGTTGCCAATATACGGAGATGCCATCATCCACG 370
Query 371 CCTACAGCGGGCAGAACATGGGCGATATGGACCCACACATATTTGCCGTGGCAGAAGAGGCATACAAGCAGATG 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CCTACAGCGGGCAGAACATGGGCGATATGGACCCACACATATTTGCCGTGGCAGAAGAGGCATACAAGCAGATG 444
Query 445 GCCAGAAACAACAGAAACCAGTCCATAATTGTAAGTGGGGAGTCAGGTGCTGGAAAGACAGTGTCGGCTCGCTA 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GCCAGAAACAACAGAAACCAGTCCATAATTGTAAGTGGGGAGTCAGGTGCTGGAAAGACAGTGTCGGCTCGCTA 518
Query 519 TGCCATGAGGTACTTTGCCACCGTCAGCAAATCGGGCAGCAACGCTCACGTGGAAGACAAGGTCCTGGCATCCA 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGCCATGAGGTACTTTGCCACCGTCAGCAAATCGGGCAGCAACGCTCACGTGGAAGACAAGGTCCTGGCATCCA 592
Query 593 ATCCCATCACCGAGGCCGTTGGAAATGCCAAGACCACCCGCAATGACAATAGTAGTCGGTTTGGGAAATACACA 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ATCCCATCACCGAGGCCGTTGGAAATGCCAAGACCACCCGCAATGACAATAGTAGTCGGTTTGGGAAATACACA 666
Query 667 GAAATCAGTTTTGATGAACAAAATCAAATTATAGGAGCCAACATGAGCACTTACCTCCTGGAGAAATCCAGAGT 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GAAATCAGTTTTGATGAACAAAATCAAATTATAGGAGCCAACATGAGCACTTACCTCCTGGAGAAATCCAGAGT 740
Query 741 TGTCTTTCAATCGGAAAATGAACGAAATTACCACATTTTCTATCAGCTTTGTGCATCTGCACAGCAGTCGGAAT 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TGTCTTTCAATCGGAAAATGAACGAAATTACCACATTTTCTATCAGCTTTGTGCATCTGCACAGCAGTCGGAAT 814
Query 815 TTAAACATCTTAAATTGGGGAGTGCCGAAGAATTTAATTATACAAGAATGGGAGGCAATACTGTCATTGAGGGT 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TTAAACATCTTAAATTGGGGAGTGCCGAAGAATTTAATTATACAAGAATGGGAGGCAATACTGTCATTGAGGGT 888
Query 889 GTGAATGATCGAGCTGAAATGGTAGAGACTCAAAAGACCTTCACGCTTCTGGGTTTCAAGGAGGATTTTCAGAT 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GTGAATGATCGAGCTGAAATGGTAGAGACTCAAAAGACCTTCACGCTTCTGGGTTTCAAGGAGGATTTTCAGAT 962
Query 963 GGACGTTTTTAAAATCCTGGCAGCCATCCTACATCTGGGCAACGTGCAGATCACCGCGGTGGGCAACGAGAGGT 1036
||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||
Sbjct 963 GGACGTTTTTAAAATCCTGGCAGCCATCCTACATCTGGGCAATGTGCAGATCACCGCGGTGGGCAACGAGAGGT 1036
Query 1037 CCTCAGTTAGTGAGGATGACAGTCACCTGAAGGTGTTCTGTGAGCTCCTGGGCCTGGAGAGTGGCAGAGTTGCT 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CCTCAGTTAGTGAGGATGACAGTCACCTGAAGGTGTTCTGTGAGCTCCTGGGCCTGGAGAGTGGCAGAGTTGCT 1110
Query 1111 CAGTGGCTGTGCAATCGCAAAATCGTCACAAGCTCTGAGACGGTGGTAAAACCCATGACCAGGCCTCAGGCTGT 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CAGTGGCTGTGCAATCGCAAAATCGTCACAAGCTCTGAGACGGTGGTAAAACCCATGACCAGGCCTCAGGCTGT 1184
Query 1185 CAACGCCAGGGATGCACTGGCCAAAAAGATCTATGCTCACCTGTTCGACTTCATTGTGGAGAGAATTAACCAAG 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CAACGCCAGGGATGCACTGGCCAAAAAGATCTATGCTCACCTGTTCGACTTCATTGTGGAGAGAATTAACCAAG 1258
Query 1259 CGTTGCAGTTTTCA----------------------------------------GTTTTGAAACCTTTGATG-- 1290
|||||||||||||| ||||||||||||||||||
Sbjct 1259 CGTTGCAGTTTTCAGGCAAGCAGCACACTTTTATTGGTGTTTTGGACATTTATGGTTTTGAAACCTTTGATGTG 1332
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 1333 AACAGCTTTGAACAATTTTGCATCAATTACGCTAATGAAAAACTGCAACAACAGTTTAACATGCATGTCTTCAA 1406
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 1407 ACTGGAACAAGAAGAATACATGAAGGAAGATATACCTTGGACGCTGATAGATTTTTATGACAATCAACCAGTTA 1480
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 1481 TTGACCTGATTGAAGCAAAAATGGGAATTCTGGAGTTACTGGATGAAGAATGTTTGTTACCACATGGAACTGAT 1554
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 1555 GAAAACTGGCTTCAAAAGCTGTATAATAATTTTGTCAACAGGAACCCTTTGTTTGAAAAGCCTAGAATGTCAAA 1628
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 1629 CACATCCTTTGTCATCCAGCACTTTGCTGATAAGGTAGAGTATAAATGTGAAGGTTTCCTGGAGAAAAACAGAG 1702
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 1703 ACACCGTCTATGACATGCTGGTTGAAATCCTGAGAGCAAGCAAGTTCCGCAGCTCTCTGTACTTGCTCATGGAG 1776
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 1777 ACCCTCAATGCGACGACGCCCCACTACGTTCGATGCATCAAGCCAAATGATGAGAAGTTACCCTTTGAATTTGA 1850
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 1851 CTCCAAAAGAATTGTTCAGCAGCTGCGAGCCTGCGGCGTTTTAGAAACGATTCGCATTAGTGCACAGAGCTACC 1924
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 1925 CTTCCAGGTGGACATACATCGAGTTCTACAGTCGCTACGGCATTCTCATGACCAAGCAAGAGCTTTCCTTCAGC 1998
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 1999 GATAAAAAGGAGGTGTGCAAGGTGGTTTTACACAGACTCATCCAGGATTCTAATCAGTACCAGTTTGGTAAAAC 2072
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2073 CAAAATTTTCTTCAGAGCAGGACAAGTGGCTTATTTAGAGAAACTTCGATTGGATAAACTGAGGCAGAGTTGTG 2146
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2147 TTATGGTACAAAAGCACATGCGTGGCTGGCTCCAGAGGAAAAAATTCCTCCGAGAGAGACGAGCCGCCCTGATA 2220
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2221 ATCCAGCAGTACTTCCGGGGTCAGCAAACTGTGAGGAAAGCTATTACTGCAGTGGCCTTAAAAGAAGCTTGGGC 2294
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2295 AGCCATAATCATTCAGAAGCACTGCCGCGGGTATCTTGTTCGCAGCCTGTATCAGTTGATTCGCATGGCCACCA 2368
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2369 TCACAATGCAGGCCTACAGCCGAGGATTCCTGGCAAGGAGGAGGTATCGAAAGATGCTGGAGGAACATAAGGCT 2442
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2443 GTGATCCTACAGAAATACGCACGGGCGTGGCTGGCCAGACGCAGATTCCAGAGTATCCGACGATTCGTGCTTAA 2516
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2517 TATTCAGCTTACTTACAGGGTCCAGCGTTTGCAGAAAAAGTTGGAAGATCAGAACAAAGAAAACCATGGGCTGG 2590
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2591 TGGAGAAGCTGACTAGCCTGGCTGCTCTTCGAGCTGGGGATGTGGAAAAGATTCAGAAGCTGGAAGCAGAACTA 2664
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2665 GAAAAAGCAGCCACTCACAGGCGAAATTACGAGGAGAAGGGGAAGAGATACAGGGATGCTGTGGAAGAGAAATT 2738
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2739 GGCAAAGCTTCAGAAGCATAATTCAGAACTGGAAACACAGAAAGAACAAATACAGCTGAAGCTTCAAGAGAAGA 2812
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2813 CTGAAGAGTTAAAAGAAAAAATGGACAACCTCACCAAGCAGCTCTTTGATGATGTACAAAAGGAAGAACGGCAA 2886
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2887 AGAATGCTTCTTGAAAAAAGTTTTGAACTGAAAACACAAGACTATGAGAAGCAGATTCAGTCTTTGAAAGAAGA 2960
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2961 AATTAAAGCTCTCAAGGATGAGAAGATGCAACTCCAACACCTGGTGGAGGGGGAGCACGTCACTTCTGATGGCT 3034
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 3035 TGAAGGCGGAAGTGGCCCGCCTGAGCAAGCAGGTCAAGACAATCTCTGAGTTCGAAAAAGAGATAGAACTACTT 3108
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 3109 CAGGCACAGAAGATAGATGTGGAGAAACATGTGCAGTCACAAAAACGGGAAATGAGAGAAAAGATGTCAGAGAT 3182
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 3183 CACCAAACAACTTCTCGAAAGCTATGACATTGAAGATGTAAGAAGCAGGCTCTCTGTGGAAGATCTGGAACATT 3256
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 3257 TAAATGAGGATGGAGAACTTTGGTTTGCTTATGAAGGACTAAAGAAAGCAACACGTGTTTTGGAGAGCCATTTC 3330
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 3331 CAGTCTCAGAAGGATTGCTATGAAAAGGAGATTGAAGCTTTGAACTTCAAAGTGGTGCATCTCAGTCAAGAAAT 3404
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 3405 CAACCACCTGCAGAAGTTATTCAGAGAAGAAAATGACATCAATGAAAGCATCCGTCATGAAGTTACCAGGCTAA 3478
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 3479 CATCAGAGAACATGATGATCCCAGACTTTAAACAGCAAATTTCAGAATTGGAGAAACAGAAGCAAGATCTTGAA 3552
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 3553 ATCCGCCTGAATGAACAAGCTGAGAAAATGAAAGGAAAACTAGAAGAATTGTCTAATCAGTTACATCGCAGTCA 3626
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 3627 AGAGGAGGAAGGAACACAAAGAAAGGCCTTGGAAGCCCAAAATGAAATACATACCAAAGAGAAGGAGAAGCTGA 3700
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 3701 TTGATAAGATTCAAGAAATGCAGGAGGCCAGTGACCACTTGAAGAAACAATTTGAAACTGAAAGTGAAGTCAAG 3774
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 3775 TGTAACTTCCGGCAGGAAGCATCCCGGCTCACTTTGGAAAACAGGGATCTTGAAGAAGAATTAGACATGAAAGA 3848
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 3849 CAGAGTGATTAAAAAGCTACAAGATCAAGTCAAGACACTAAGCAAGACAATTGGAAAAGCCAATGATGTGCACT 3922
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 3923 CGTCCTCAGGACCCAAGGAGTACCTTGGAATGCTGCAATACAAGAGAGAAGACGAGGCCAAGCTCATTCAGAAC 3996
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 3997 CTCATTCTTGACTTGAAGCCCCGTGGCGTGGTGGTGAACATGATCCCCGGGCTGCCGGCTCATATCCTGTTCAT 4070
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 4071 GTGTGTGCGCTACGCAGACTCTCTGAATGATGCCAACATGCTGAAGTCCCTCATGAACAGCACCATTAATGGCA 4144
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 4145 TCAAGCAGGTGGTTAAGGAACATTTAGAAGACTTTGAAATGCTGTCCTTTTGGCTTTCCAACACTTGTCATTTT 4218
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 4219 CTCAATTGCCTGAAGCAGTACAGCGGAGAAGAGGAATTCATGAAGCATAATAGTCCACAGCAGAATAAGAATTG 4292
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 4293 CTTGAACAATTTTGACCTTTCAGAATACAGACAGATTCTCAGTGATGTGGCTATACGAATATATCATCAATTTA 4366
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 4367 TTATCATAATGGAAAAGAATATCCAACCGATAATAGTTCCGGGAATGCTGGAGTATGAGAGCCTGCAGGGCATT 4440
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 4441 TCCGGCCTGAAGCCCACAGGCTTCCGGAAGCGCTCCTCTAGCATAGACGACACGGACGGCTACACCATGACCTC 4514
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 4515 CGTCCTGCAACAGCTGAGCTACTTTTACACCACCATGTGCCAGAACGGCCTGGACCCCGAGCTTGTGAGGCAGG 4588
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 4589 CGGTGAAGCAGCTCTTCTTCTTGATCGGGGCGGTCACGCTGAACAGCCTCTTCCTGCGCAAGGACATGTGCTCC 4662
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 4663 TGCAGAAAAGGGATGCAGATCAGGTGCAATATCAGCTACTTAGAAGAATGGCTTAAAGATAAGAACTTGCAGAA 4736
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 4737 CAGCTTAGCAAAGGAAACTTTGGAGCCCCTCTCTCAGGCAGCCTGGTTGCTTCAGGTCAAGAAGACCACAGACA 4810
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 4811 GTGATGCCAAGGAGATCTACGAACGCTGCACCTCACTGTCTGCTGTGCAGATCATAAAGATCCTTAATTCATAC 4884
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 4885 ACACCTATAGATGACTTTGAGAAGAGAGTGACTCCATCCTTTGTTCGCAAAGTACAGGCTCTCCTAAATAGCCG 4958
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 4959 GGAGGATTCATCACAGCTGATGTTGGATACCAAATATCTCTTTCAAGTCACATTTCCTTTTACCCCCTCTCCAC 5032
Query 1291 ----------------------------------------------------------- 1290
Sbjct 5033 ATGCTCTGGAAATGATTCAGATCCCCAGCAGTTTCAAGCTAGGCTTTCTGAATAGGTTA 5091
