Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12312
- Subject:
- XM_006532927.2
- Aligned Length:
- 2094
- Identities:
- 615
- Gaps:
- 1416
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCCGGAGGAGGCGAGCCTCCCGCCCGCTAAGAGATTCCGGCCGGGCTCCTGCCCTCCCGGGAGACGAGTAGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GATGCTGTTGACGGCTGGCGGCGGCGGCGGAGCTGGAGGAGGCCGGAGGCAGACGCCGCCGCTGGCCCAGCCTT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CGGCCAGTCCCTACCGCGAGGCCCTGGAGCTGCAGCGCCGGAGTCTGCCCATCTTCCGGGCGCGGGGGCAGCTA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTGGCTCAGCTCCGAAACCTGGACAACGCGGTCCTCATCGGGGAAACTGGCTCTGGGAAAACAACTCAGATCCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ACAGTACCTCTATGAAGGGGGAATTAGCCGCCAGGGCATCATCGCTGTGACCCAGCCCCGTCGAGTGGCTGCCA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCTCTCTTGCCACCAGAGTCTCAGATGAGAAGAGGACAGAACTCGGGAAGCTGGTTGGCTATACAGTGCGCTTT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GAGGATGTCACCTCAGAAGACACCAGGATCAAGTTCCTGACAGATGGCATGCTTCTGCGTGAAGCAATTTCAGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTCCTTGCTTCGGAAGTACAGCTGTGTCATTTTGGACGAGGCCCATGAGCGGACTATTCACACAGATGTGCTCT 592
Query 1 -----------------------------------------------ATGC------AGGTGATTGTGATGTCA 21
.||| |.|||||||||||||||
Sbjct 593 TTGGAGTGGTGAAGACTGCACAGAAGAGGCGAAAGGAGCTAGGGAAACTGCCTCTCAAAGTGATTGTGATGTCA 666
Query 22 GCTACGATGGATGTGGACCTGTTCTCTCAGTATTTCAATGGCGCCCCCGTCCTCTACCTAGAGGGTCGGCAGCA 95
|||||.||||||||.||||||||.||||||||.||||||.|.|||||.|||||.|||||.||||||||||||||
Sbjct 667 GCTACCATGGATGTCGACCTGTTTTCTCAGTACTTCAATAGAGCCCCTGTCCTTTACCTTGAGGGTCGGCAGCA 740
Query 96 TCCGATCCAGGTGTTTTACACCAAACAGCCTCAGAATGATTACCTGCACGCCGCGCTTGTCTCCGTCTTCCAGA 169
|||.||||||.|.||.||.|||||||||||||||.|.|||||||||||.||.||.||||||||.||||||||||
Sbjct 741 TCCAATCCAGATCTTCTATACCAAACAGCCTCAGCAGGATTACCTGCATGCAGCCCTTGTCTCAGTCTTCCAGA 814
Query 170 TCCACCAGGAAGCCCCTTCTTCACAGGACATCCTGGTGTTCCTCACTGGGCAGGAGGAGATCGAAGCCATGAGC 243
|||||||||||||.|||.||||.||.|||||||||||||||||||||||.|||||||||||||||||.||||||
Sbjct 815 TCCACCAGGAAGCTCCTGCTTCTCAAGACATCCTGGTGTTCCTCACTGGTCAGGAGGAGATCGAAGCAATGAGC 888
Query 244 AAGACGTGCCGAGACATTGCAAAGCACCTCCCAGACGGCTGCCCTGCGATGCTGGTCCTTCCTCTGTACGCCTC 317
|||||.|||.|||||||.||||.||||||||||||.|||||||||.|.|||||.||||||||||||||||||||
Sbjct 889 AAGACCTGCAGAGACATCGCAAGGCACCTCCCAGATGGCTGCCCTTCAATGCTCGTCCTTCCTCTGTACGCCTC 962
Query 318 CCTGCCCTATGCACAGCAGCTCCGAGTCTTCCAAGGGGCCCCAAAGGGCTATCGCAAAGTGATCATTTCAACCA 391
||||||||||.|.||||||||.||||||||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CCTGCCCTATTCGCAGCAGCTTCGAGTCTTTCAAGGGGCCCCAAAGGGCTATCGCAAAGTGATCATTTCAACCA 1036
Query 392 ACATCGCTGAAACCTCCATAACCATTACAGGAATAAAATATGTAGTTGACACGGGCATGGTTAAAGCAAAGAAG 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ACATCGCTGAAACCTCCATAACCATTACAGGAATAAAATATGTAGTTGACACGGGCATGGTTAAAGCAAAGAAG 1110
Query 466 TATAACCCTGACAGTGGTCTTGAGGTGTTAGCAGTGCAGCGGGTATCGAAGACGCAGGCTTGGCAGCGCACAGG 539
||||||||||||||||||||||||||..||||.||.|||.|.|||||.|||||.|||||.||||||||||||||
Sbjct 1111 TATAACCCTGACAGTGGTCTTGAGGTACTAGCTGTACAGAGAGTATCAAAGACCCAGGCCTGGCAGCGCACAGG 1184
Query 540 GAGGGCTGGCAGAGAGGACAGTGGCATCTGCTACCGGCTCTACACGGAGGACGAGTTTGAGAAGTTTGATAAGA 613
.||||||||..|||||||||||||||||||||||||.||||||||.||||||||||||||||||||.||.||||
Sbjct 1185 CAGGGCTGGGCGAGAGGACAGTGGCATCTGCTACCGACTCTACACTGAGGACGAGTTTGAGAAGTTCGAGAAGA 1258
Query 614 TGACCGTGCCAGAGATCCAGAGGTGTAACCTGGCCAGTGTGATGCTTCAGCTTCTAGCAATGAAAGTCCCAAAT 687
||||.|||||||||||||||||
Sbjct 1259 TGACGGTGCCAGAGATCCAGAG---------------------------------------------------- 1280
Query 688 GTGCTCACCTTTGACTTCATGTCGAAGCCATCTCCAGATCACATTCAGGCGGCCATTGCCCAACTGGACCTGTT 761
Sbjct 1281 -------------------------------------------------------------------------- 1280
Query 762 AGGTGCTCTTGAACATAAGGATGACCAGCTTACCCTGACTCCAATGGGAAGAAAGATGGCAGCATTTCCTTTAG 835
Sbjct 1281 -------------------------------------------------------------------------- 1280
Query 836 AACCCAAATTTGCCAAAACCATCCTCATGTCCCCCAAATTCCACTGTACAGAGGAGATCCTGACCATTGTCTCC 909
||.||||||.|||||.||||||||||||||||.||.|||||.|
Sbjct 1281 -----------------ACTATCCTCCTGTCCTCCAAATTCCACTGTACCGAAGAGATTC-------------- 1323
Query 910 CTGCTGTCTGTGGACAGCGTCCTCCACAACCCTCCTTCCCGGCGAGAGGAAGTGCAAGGGGTCCGCAAGAAGTT 983
Sbjct 1324 -------------------------------------------------------------------------- 1323
Query 984 CATATCCAGCGAGGGGGATCACATGACCCTGCTCAATATCTATCGGACCTTCAAAAACCTAGGCGGAAATAAGG 1057
Sbjct 1324 -------------------------------------------------------------------------- 1323
Query 1058 ATTGGTGCAAAGAGAATTTTGTCAACAGCAAGAATATGACGCTGGTAGCAGAAGTCAGAGCACAGCTGAGGGAC 1131
Sbjct 1324 -------------------------------------------------------------------------- 1323
Query 1132 ATCTGCTTAAAGATGTCAATGCCAATCGCATCATCCCGAGGAGACGTGGAGAGTGTCCGCCGCTGCCTGGCTCA 1205
Sbjct 1324 -------------------------------------------------------------------------- 1323
Query 1206 CAGCCTCTTCATGAGCACCGCCGAGCTTCAGCCAGATGGCACCTATGCCACCACGGACACCCACCAGCCAGTGG 1279
Sbjct 1324 -------------------------------------------------------------------------- 1323
Query 1280 CCATCCACCCGTCGTCTGTCCTCTTCCACTGCAAGCCGGCCTGCGTCGTGTACACTGAGCTGCTCTACACCAAC 1353
Sbjct 1324 -------------------------------------------------------------------------- 1323
Query 1354 AAGTGCTACATGCGGGACCTCTGCGTCATAGATGCACAGTGGCTGTACGAGGCTGCCCCTGAGTACTTTAGGAG 1427
Sbjct 1324 -------------------------------------------------------------------------- 1323
Query 1428 GAAGCTGAGAACCGCCAGAAAC 1449
Sbjct 1324 ---------------------- 1323
