Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12325
- Subject:
- NR_146742.1
- Aligned Length:
- 2669
- Identities:
- 1077
- Gaps:
- 1592
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGGAGGCGGGTCGTATAAGGAGGTGGGGCGAGGCCGGAACTGGCGGACTGCGGCGCACTTCCGTAGAGGTGGA 74
Query 1 -ATGGCGTGCGGCTTTCGCCGCGCTATTGCTTGCC--------------------------------------- 34
||||||||||||||||||||||||||||||||||
Sbjct 75 CATGGCGTGCGGCTTTCGCCGCGCTATTGCTTGCCAGGTATGGATCCCGGAGCGCGCAGAGGAGTCCCTGAGGA 148
Query 35 -------------------------------------------------------------------------- 34
Sbjct 149 GCTAGGGACCCCAAAGGCCTTTCACCGCTGCGGGCCAGTCCTCAGTCAGCTGGAGGGTGGGTCCCACGGAATCC 222
Query 35 -------------------------------------------------------------------------- 34
Sbjct 223 TGTTAGTTTCTACCACCTCCTCCCCCTTCTCTGGAGCTGGTGGAGCTTCAGAAGTCCTGTGGAGCGTCGGCTGG 296
Query 35 ----------------------------------AGCTTTCCAGAGTGTTGAATCTTCCACCAGAAAACTTGAT 74
||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GATCAGTTTGTCTCGGTGAAAAGTAAACTTTGAAAGCTTTCCAGAGTGTTGAATCTTCCACCAGAAAACTTGAT 370
Query 75 CACATCAATATCTGCAGTTCCAATTTCCCAAAAAGAAGAAGTAGCTGATTTTCAGCTTTCTGTGGATTCTTTAT 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CACATCAATATCTGCAGTTCCAATTTCCCAAAAAGAAGAAGTAGCTGATTTTCAGCTTTCTGTGGATTCTTTAT 444
Query 149 TGGAAAAAGACAATGACCATTCAAGACCAGATATTCAAGTTCAAGCCAAGAGACTAGCAGAGAAGCTAAGATGT 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TGGAAAAAGACAATGACCATTCAAGACCAGATATTCAAGTTCAAGCCAAGAGACTAGCAGAGAAGCTAAGATGT 518
Query 223 GATACAGTGGTGAGTGAAATCAGTACTGGTCAAAGGACTGTAAATTTCAAAATAAACAGAGAGCTCTTAACAAA 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GATACAGTGGTGAGTGAAATCAGTACTGGTCAAAGGACTGTAAATTTCAAAATAAACAGAGAGCTCTTAACAAA 592
Query 297 GACAGTGCTACAACAAGTAATTGAAGATGGCTCAAAATATGGATTAAAAAGTGAACTTTTCTCTGGACTTCCCC 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GACAGTGCTACAACAAGTAATTGAAGATGGCTCAAAATATGGATTAAAAAGTGAACTTTTCTCTGGACTTCCCC 666
Query 371 AGAAGAAGATTGTGGTTGAATTCA-------------------------------------------------- 394
||||||||||||||||||||||||
Sbjct 667 AGAAGAAGATTGTGGTTGAATTCAGGGTAGCAAGACCTCTTTACAAAGGTACTCAAGGCTCTAAGATAGTGAAA 740
Query 395 -------------------------------------------------------------------------- 394
Sbjct 741 TCATCTAGTCTTGAAACAGGCACAGCATCATTTTTGTCACTTTCTGCTGATGAAAGCAAGTCACAAGATCACCC 814
Query 395 --------------------------------------GTTCACCTAATGTTGCCAAAAAATTTCATGTTGGAC 430
||||||||||||||||||||||||||||||||||||
Sbjct 815 CAGATTCAAGGGAAGAAAAATAGAGTACATCTCTTAATGTTCACCTAATGTTGCCAAAAAATTTCATGTTGGAC 888
Query 431 ATTTGCGTTCTACCATCATAGGAAATTTTATAGCAAATCTCAAAGAAGCTTTAGGACATCAAGTAATAAGAATA 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 ATTTGCGTTCTACCATCATAGGAAATTTTATAGCAAATCTCAAAGAAGCTTTAGGACATCAAGTAATAAGAATA 962
Query 505 AATTACCTTGGCGATTGGGGCATGCAGTTTGGTCTTCTGGGAACTGGCTTCCAGCTGTTTGGCTATGAGGAAAA 578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 AATTACCTTGGCGATTGGGGCATGCAGTTTGGTCTTCTGGGAACTGGCTTCCAGCTGTTTGGCTATGAGGAAAA 1036
Query 579 ACTGCAGTCCAATCCTCTACAGCATCTCTTTGAAGTTTATGTACAAGTTAATAAAGAAGCAGCAGATGATAAAA 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ACTGCAGTCCAATCCTCTACAGCATCTCTTTGAAGTTTATGTACAAGTTAATAAAGAAGCAGCAGATGATAAAA 1110
Query 653 GTGTAGCAAAAGCAGCACAGGAGTTCTTCCAACGATTGGAACTGGGCGATGTGCAAGCACTTTCACTGTGGCAA 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GTGTAGCAAAAGCAGCACAGGAGTTCTTCCAACGATTGGAACTGGGCGATGTGCAAGCACTTTCACTGTGGCAA 1184
Query 727 AAATTTCGGGACTTGAGCATTGAAGAGTACATTCGGGTTTACAAGCGTCTGGGAGTATATTTTGATGAATATTC 800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 AAATTTCGGGACTTGAGCATTGAAGAGTACATTCGGGTTTACAAGCGTCTGGGAGTATATTTTGATGAATATTC 1258
Query 801 AGGAGAATCATTTTATCGTGAAAAATCTCAAGAGGTCTTAAAGTTGCTGGAGAGTAAAGGACTCCTACTGAAAA 874
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AGGAGAATCATTTTATCGTGAAAAATCTCAAGAGGTCTTAAAGTTGCTGGAGAGTAAAGGACTCCTACTGAAAA 1332
Query 875 CAATAAAAGGAACGGCTGTAGTAGATCTCTCTGGGAATGGCGACCCCTCCTCAATTTGTACTGTAATGCGAAGT 948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CAATAAAAGGAACGGCTGTAGTAGATCTCTCTGGGAATGGCGACCCCTCCTCAATTTGTACTGTAATGCGAAGT 1406
Query 949 GATGGGACTTCTCTCTATGCAACCAGAGATCTTGCAGCTGCTATAGATCGAATGGACAAGTATAATTTTGATAC 1022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GATGGGACTTCTCTCTATGCAACCAGAGATCTTGCAGCTGCTATAGATCGAATGGACAAGTATAATTTTGATAC 1480
Query 1023 AATGATATATGTGATAAAGGACAAAAAAAGCATTTTCAGCAAGTATTCCAAATGC------------------- 1077
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 AATGATATATGTGATAAAGGACAAAAAAAGCATTTTCAGCAAGTATTCCAAATGCTGAAGATCATGGGATATGA 1554
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1555 CTGGGCAGAAAGGTGCCAGCACGTGCCCTTTGGAGTAGTACAGGGAATGAAGACTCGAAGAGGAGATGTCACTT 1628
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1629 TCCTGGAAGATGTTTTAAATGAGATTCAATTAAGGATGCTACAGAACATGGCTTCAATTAAGACAACTAAAGAA 1702
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1703 CTCAAGAACCCACAAGAGACTGCAGAGAGGGTCGGGCTCGCAGCACTCATTATTCAGGACTTCAAAGGTTTACT 1776
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1777 CTTATCTGACTACAAGTTCAGCTGGGATCGTGTTTTCCAGAGTCGCGGGGACACAGGAGTCTTCCTACAGTACA 1850
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1851 CACACGCCCGCCTCCACAGTTTGGAAGAGACTTTTGGATGTGGGTACCTGAATGACTTCAACACTGCTTGTTTA 1924
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1925 CAAGAGCCACAGTCTGTTTCAATTCTTCAGCATCTTCTCAGGTTCGACGAGGTGCTTTATAAATCATCTCAGGA 1998
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1999 CTTTCAACCCAGGCATATCGTCAGTTACCTTCTAACTTTAAGTCATCTTGCAGCTGTGGCACACAAAACACTAC 2072
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2073 AAATAAAAGATAGTCCTCCTGAAGTGGCTGGGGCCAGACTTCATCTTTTCAAAGCTGTCCGTTCTGTCCTAGCC 2146
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2147 AATGGAATGAAACTTCTTGGAATAACACCTGTATGTAGGATGTAATTTCCATTAAAATGGCTTTTAAAATGTCA 2220
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2221 AGTGAATTCTAGTTATCTATTCTGAGATGCCTTGCTGTTCAGAATAAATTTAAATTTTTTTTTTTTTTTTTTGA 2294
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2295 GATGGAGTTTCGCTCTTGTTGCCCAGGCTGGAGTGCAATGGTGTGATGTTGGCTCACTGCAACCTCCACCTCCC 2368
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2369 AGGTTCAAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACGTGCCATCACGCCAGGCTAA 2442
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2443 TTTTGTATTTTTAGTAGAGACAGGGTTTCTCTATGTTGGTCAGGCTGGTCTTGCACTCCCGACCTCAGGTTATC 2516
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2517 TGTCTGCCTTGGCCTCCCAAAGTGTTGGGATTAGAGGCATGAACCACCACGCCCAGCCAAAGTTAAACTATTAT 2590
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2591 TCTGTGTCAGAATCTGTATTAAATGTGACTTGTCAAGTTATTCAGTCTTTATCCTTAAATAAATGAGTTATCTG 2664
Query 1078 ----- 1077
Sbjct 2665 AATTC 2669
