Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12325
- Subject:
- NR_146757.1
- Aligned Length:
- 2569
- Identities:
- 1055
- Gaps:
- 1500
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGGAGGCGGGTCGTATAAGGAGGTGGGGCGAGGCCGGAACTGGCGGACTGCGGCGCACTTCCGTAGAGGTGGA 74
Query 1 -ATGGCGTGCGGCTTTCGCCGCGCTATTGCTTGCCAG------------------------------------- 36
||||||||||||||||||||||||||||||||||||
Sbjct 75 CATGGCGTGCGGCTTTCGCCGCGCTATTGCTTGCCAGGTATGGATCCCGGAGCGCGCAGAGGAGTCCCTGAGGA 148
Query 37 ------------------CTTT------------CCA---------------GAGTGT---------TGAATC- 55
|||| ||| |||.|| .|||||
Sbjct 149 GCTAGGGACCCCAAAGGCCTTTCACCGCTGCGGGCCAGTCCTCAGTCAGCTGGAGGGTGGGTCCCACGGAATCC 222
Query 56 -------TTCCACCAGAAAACTTGATCACATCAATATCTGCAG----------TTC------------------ 94
|||.||| ||.|..||.| |..|.||||.|| |||
Sbjct 223 TGTTAGTTTCTACC-----ACCTCCTCCC--CCTTCTCTGGAGCTGGTGGAGCTTCAGAAGTCCTGTGGAGCGT 289
Query 95 ----------CAATTTCCC------AA------------AAAGAAGAAGTAGCTGATTTTCAGCTTTCTGTGGA 140
||.|||..| || |||| ||||||||||||||||||||||||||||||
Sbjct 290 CGGCTGGGATCAGTTTGTCTCGGTGAAAAGTAAACTTTGAAAG-AGAAGTAGCTGATTTTCAGCTTTCTGTGGA 362
Query 141 TTCTTTATTGGAAAAAGACAATGACCATTCAAGACCAGATATTCAAGTTCAAGCCAAGAGACTAGCAGAGAAGC 214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 363 TTCTTTATTGGAAAAAGACAATGACCATTCAAGACCAGATATTCAAGTTCAAGCCAAGAGACTAGCAGAGAAGC 436
Query 215 TAAGATGTGATACAGTGGTGAGTGAAATCAGTACTGGTCAAAGGACTGTAAATTTCAAAATAAACAGAGAGCTC 288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 437 TAAGATGTGATACAGTGGTGAGTGAAATCAGTACTGGTCAAAGGACTGTAAATTTCAAAATAAACAGAGAGCTC 510
Query 289 TTAACAAAGACAGTGCTACAACAAGTAATTGAAGATGGCTCAAAATATGGATTAAAAAGTGAACTTTTCTCTGG 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 511 TTAACAAAGACAGTGCTACAACAAGTAATTGAAGATGGCTCAAAATATGGATTAAAAAGTGAACTTTTCTCTGG 584
Query 363 ACTTCCCCAGAAGAAGATTGTGGTTGAATTCAGTTCACCTAATGTTGCCAAAAAATTTCATGTTGGACATTTGC 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 585 ACTTCCCCAGAAGAAGATTGTGGTTGAATTCAGTTCACCTAATGTTGCCAAAAAATTTCATGTTGGACATTTGC 658
Query 437 GTTCTACCATCATAGGAAATTTTATAGCAAATCTCAAAGAAGCTTTAGGACATCAAGTAATAAGAATAAATTAC 510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 659 GTTCTACCATCATAGGAAATTTTATAGCAAATCTCAAAGAAGCTTTAGGACATCAAGTAATAAGAATAAATTAC 732
Query 511 CTTGGCGATTGGGGCATGCAGTTTGGTCTTCTGGGAACTGGCTTCCAGCTGTTTGGCTATGAGGAAAAACTGCA 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 733 CTTGGCGATTGGGGCATGCAGTTTGGTCTTCTGGGAACTGGCTTCCAGCTGTTTGGCTATGAGGAAAAACTGCA 806
Query 585 GTCCAATCCTCTACAGCATCTCTTTGAA---------------------------------------------- 612
||||||||||||||||||||||||||||
Sbjct 807 GTCCAATCCTCTACAGCATCTCTTTGAAGTCTAGAGACAAGATCGCTATGTAGACACACCGTGAACCATTTCCC 880
Query 613 -------------------------------------------------------------------------- 612
Sbjct 881 ACTGTGGGCCTGCACCACCCCAGGGGCTTCCTAGCTTCTGCTCTTCTGGAAGTCTTCCCCATCTCCTCCCCATT 954
Query 613 ----GTTTATGTACAAGTTAATAAAGAAGCAGCAGATGATAAAAGTGTAGCAAAAGCAGCACAGGAGTTCTTCC 682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 955 CCAGGTTTATGTACAAGTTAATAAAGAAGCAGCAGATGATAAAAGTGTAGCAAAAGCAGCACAGGAGTTCTTCC 1028
Query 683 AACGATTGGAACTGGGCGATGTGCAAGCACTTTCACTGTGGCAAAAATTTCGGGACTTGAGCATTGAAGAGTAC 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1029 AACGATTGGAACTGGGCGATGTGCAAGCACTTTCACTGTGGCAAAAATTTCGGGACTTGAGCATTGAAGAGTAC 1102
Query 757 ATTCGGGTTTACAAGCGTCTGGGAGTATATTTTGATGAATATTCAGGAGAATCATTTTATCGTGAAAAATCTCA 830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1103 ATTCGGGTTTACAAGCGTCTGGGAGTATATTTTGATGAATATTCAGGAGAATCATTTTATCGTGAAAAATCTCA 1176
Query 831 AGAGGTCTTAAAGTTGCTGGAGAGTAAAGGACTCCTACTGAAAACAATAAAAGGAACGGCTGTAGTAGATCTCT 904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1177 AGAGGTCTTAAAGTTGCTGGAGAGTAAAGGACTCCTACTGAAAACAATAAAAGGAACGGCTGTAGTAGATCTCT 1250
Query 905 CTGGGAATGGCGACCCCTCCTCAATTTGTACTGTAATGCGAAGTGATGGGACTTCTCTCTATGCAACCAGAGAT 978
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1251 CTGGGAATGGCGACCCCTCCTCAATTTGTACTGTAATGCGAAGTGATGGGACTTCTCTCTATGCAACCAGAGAT 1324
Query 979 CTTGCAGCTGCTATAGATCGAATGGACAAGTATAATTTTGATACAATGATATATGT----GATAAAGGACAAAA 1048
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1325 CTTGCAGCTGCTATAGATCGAATGGACAAGTATAATTTTGATACAATGATATATGTGACAGATAAAGGACAAAA 1398
Query 1049 AAAGCATTTTCAGCAAGTATTCCAAATGC--------------------------------------------- 1077
|||||||||||||||||||||||||||||
Sbjct 1399 AAAGCATTTTCAGCAAGTATTCCAAATGCTGAAGATCATGGGATATGACTGGGCAGAAAGGTGCCAGCACGTGC 1472
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1473 CCTTTGGAGTAGTACAGGGAATGAAGACTCGAAGAGGAGATGTCACTTTCCTGGAAGATGTTTTAAATGAGATT 1546
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1547 CAATTAAGGATGCTACAGAACATGGCTTCAATTAAGACAACTAAAGAACTCAAGAACCCACAAGAGACTGCAGA 1620
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1621 GAGGGTCGGGCTCGCAGCACTCATTATTCAGGACTTCAAAGGTTTACTCTTATCTGACTACAAGTTCAGCTGGG 1694
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1695 ATCGTGTTTTCCAGAGTCGCGGGGACACAGGAGTCTTCCTACAGTACACACACGCCCGCCTCCACAGTTTGGAA 1768
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1769 GAGACTTTTGGATGTGGGTACCTGAATGACTTCAACACTGCTTGTTTACAAGAGCCACAGTCTGTTTCAATTCT 1842
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1843 TCAGCATCTTCTCAGGTTCGACGAGGTGCTTTATAAATCATCTCAGGACTTTCAACCCAGGCATATCGTCAGTT 1916
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1917 ACCTTCTAACTTTAAGTCATCTTGCAGCTGTGGCACACAAAACACTACAAATAAAAGATAGTCCTCCTGAAGTG 1990
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1991 GCTGGGGCCAGACTTCATCTTTTCAAAGCTGTCCGTTCTGTCCTAGCCAATGGAATGAAACTTCTTGGAATAAC 2064
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2065 ACCTGTATGTAGGATGTAATTTCCATTAAAATGGCTTTTAAAATGTCAAGTGAATTCTAGTTATCTATTCTGAG 2138
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2139 ATGCCTTGCTGTTCAGAATAAATTTAAATTTTTTTTTTTTTTTTTTGAGATGGAGTTTCGCTCTTGTTGCCCAG 2212
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2213 GCTGGAGTGCAATGGTGTGATGTTGGCTCACTGCAACCTCCACCTCCCAGGTTCAAGCAATTCTCCTGCCTCAG 2286
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2287 CCTCCTGAGTAGCTGGGATTACAGGCACGTGCCATCACGCCAGGCTAATTTTGTATTTTTAGTAGAGACAGGGT 2360
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2361 TTCTCTATGTTGGTCAGGCTGGTCTTGCACTCCCGACCTCAGGTTATCTGTCTGCCTTGGCCTCCCAAAGTGTT 2434
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2435 GGGATTAGAGGCATGAACCACCACGCCCAGCCAAAGTTAAACTATTATTCTGTGTCAGAATCTGTATTAAATGT 2508
Query 1078 ----------------------------------------------------- 1077
Sbjct 2509 GACTTGTCAAGTTATTCAGTCTTTATCCTTAAATAAATGAGTTATCTGAATTC 2561
