Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_12328
• Subject: NM_001346513.1
• Aligned Length: 993
• Identities: 654
• Gaps: 249

Alignment

Query   1  ATGTTTCACAAAGCAGAAGAATTATTTTCTAAAACAACAAACAATGAAGTGGATGACATGGACACGTCAGATAC  74
                                                                                     
Sbjct   1  --------------------------------------------------------------------------  0

Query  75  CCAGTGGGGCTGGTTTTACTTGGCAGAATGTGGGAAGTGGCACATGTTTCAGCCGGATACCAACAGTCAGTGTT  148
                                                                                     
Sbjct   1  --------------------------------------------------------------------------  0

Query 149  CAGTTAGCAGTGAAGATATCGAAAAAAGCTTCAAAACAAACCCTTGTGGCTCCATTTCTTTTACTACTTCCAAA  222
                                                                                     
Sbjct   1  --------------------------------------------------------------------------  0

Query 223  TTCAGCTACAAGATAGACTTTGCAGAAATGAAGCAAATGAATCTCACCACTGGAAAGCAGCGCTTAATAAAAAG  296
                                      ||||||||.||||||||...||||||.||.||||||.|||||||.||
Sbjct   1  ---------------------------ATGAAGCAGATGAATCTTGTCACTGGGAAACAGCGCCTAATAAAGAG  47

Query 297  AGCCCCCTTTTCTATCAGTGCTTTCAGTTACATCTGTGAAAACGAGGCCATCCCTATGCCACCACACTGGGAGA  370
           .||.||.||.||.||||||||.|||||||||||||||||.||.|||||||||||.||||||.|.||||||||||
Sbjct  48  GGCTCCTTTCTCCATCAGTGCCTTCAGTTACATCTGTGAGAATGAGGCCATCCCCATGCCAACCCACTGGGAGA  121

Query 371  ATGTGAATACTCAAGTACCATATCAGCTTATTCCTCTGCACAATCAAACACATGAATATAATGAAGTTGCTAAT  444
           |.|||||..||.|.||.||.||.|||||..||.|.|||||.||.||.||.||.||.|||||||||||.||.|.|
Sbjct 122  ACGTGAACCCTGACGTTCCCTACCAGCTGGTTTCCCTGCAGAACCAGACGCACGAGTATAATGAAGTGGCCAGT  195

Query 445  CTCTTTGGGAAGACGATGGATCGCAACCGAATTAAAAGAATTCAGAGAATTCAAAACCTAGATTTGTGGGAGTT  518
           ||.||||||||.||.||||||||.||||||||||||||.|||||.||.||.||||||.||||.||.||||||||
Sbjct 196  CTTTTTGGGAAAACAATGGATCGGAACCGAATTAAAAGGATTCAAAGGATCCAAAACTTAGACTTATGGGAGTT  269

Query 519  CTTTTGCAGGAAAAAGGCTCAGCTCAAGAAAAAAAGAGGTGTGCCTCAGATTAATGAACAAATGCTGTTTCATG  592
           |||||||||||||||||||||||||||||||||.||||||||.||.|||||.|||||.||.|||||.|||||||
Sbjct 270  CTTTTGCAGGAAAAAGGCTCAGCTCAAGAAAAAGAGAGGTGTCCCCCAGATCAATGAGCAGATGCTATTTCATG  343

Query 593  GTACCAGCAGTGAATTTGTGGAAGCAATCTGCATTCATAACTTTGATTGGAGAATAAATGGTATACATGGTGCT  666
           |.||||||||||||||||||||||||||.||||||||.||||||||.||||||||.||||||.|.||.||.|||
Sbjct 344  GCACCAGCAGTGAATTTGTGGAAGCAATTTGCATTCACAACTTTGACTGGAGAATCAATGGTGTGCACGGGGCT  417

Query 667  GTCTTTGGAAAAGGAACCTATTTTGCTAGAGATGCTGCTTATTCCAGTCGTTTCTGCAAAGATGACATAAAGCA  740
           |||||||||||||||||||||||.||||||||||||||.||.||||||||||||||||||||||||||.|||||
Sbjct 418  GTCTTTGGAAAAGGAACCTATTTCGCTAGAGATGCTGCGTACTCCAGTCGTTTCTGCAAAGATGACATCAAGCA  491

Query 741  TGGGAACACATTCCAAATTCATGGTGTCAGCTTGCAACAGCGGCATCTGTTTAGAACATATAAATCTATGTTTC  814
           .||||||||||||||.||||||||.|||||||||||.|||||.||||||||.|||||.||||||||.|||||||
Sbjct 492  CGGGAACACATTCCAGATTCATGGGGTCAGCTTGCAGCAGCGACATCTGTTCAGAACCTATAAATCCATGTTTC  565

Query 815  TTGCTCGAGTGCTAATTGGAGATTACATAAACGGAGACTCCAAATACATGCGACCTCCTTCCAAAGACGGGAGC  888
           |||||||||||||||||||.|||||||||||.||||||||.|||||||||.|||||||||||||||||||||||
Sbjct 566  TTGCTCGAGTGCTAATTGGTGATTACATAAATGGAGACTCGAAATACATGAGACCTCCTTCCAAAGACGGGAGC  639

Query 889  TATGTGAATTTATATGACAGCTGTGTGGATGATACCTGGAACCCAAAGATCTTTGTGGTTTTTGATGCCAACCA  962
           |||||||||||.||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||
Sbjct 640  TATGTGAATTTGTATGACAGCTGTGTGGATGACACCTGGAACCCAAAGATCTTTGTGGTTTTTGATGCCAACCA  713

Query 963  AATCTATCCTGAGTACTTGATAGACTTTCAT  993
           .|||||.|||||||||.||||||||||.||.
Sbjct 714  GATCTACCCTGAGTACCTGATAGACTTCCAC  744