Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12415
Subject:
NM_001363104.2
Aligned Length:
1680
Identities:
1467
Gaps:
213

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCAGCAGCCAGACTCCTGCCAGTGCCGGCAGGACCCCAGCCCCTGTCGTTCCAGGCCAAGCTGACCTTCGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGATGTGGCTGTGCTCCTCTCCCAGGATGAATGGGACCGCCTGTGCCCTGCTCAGAGGGGTCTCTACAGAAATG  148

Query    1  --ATGATGGAAACCTATGGGAATGTAGTCTCATTGGGACTTCCAGGATCCAAGCCTGACATAATCTCCCAGCTG  72
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TGATGATGGAAACCTATGGGAATGTAGTCTCATTGGGACTTCCAGGATCCAAGCCTGACATAATCTCCCAGCTG  222

Query   73  GAGCGAGGGGAAGATCCCTGGGTCCTGGACAGGAAGGGGGCTAAGAAGAGCCAGGGCCTGTGGAGTGACTACTC  146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GAGCGAGGGGAAGATCCCTGGGTCCTGGACAGGAAGGGGGCTAAGAAGAGCCAGGGCCTGTGGAGTGACTACTC  296

Query  147  AGACAACCTCAAATATGACCACACTACAGCCTGTACACAACAAGACAGTTTATCTTGTCCATGGGAATGTGAAA  220
            |                                                               ||||||||||
Sbjct  297  A---------------------------------------------------------------GAATGTGAAA  307

Query  221  CCAAGGGAGAGAGTCAAAATACAGACTTGAGTCCGAAGCCATTAATTTCAGAGCAAACAGTGATTCTGGGGAAA  294
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  308  CCAAGGGAGAGAGTCAAAATACAGACTTGAGTCCGAAGCCATTAATTTCAGAGCAAACAGTGATTCTGGGGAAA  381

Query  295  ACACCCTTGGGGAGGATTGATCAAGAAAATAATGAAACAAAGCAAAGCTTCTGTCTGAGTCCAAACTCTGTTGA  368
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  382  ACACCCTTGGGGAGGATTGATCAAGAAAATAATGAAACAAAGCAAAGCTTCTGTCTGAGTCCAAACTCTGTTGA  455

Query  369  CCACCGTGAAGTTCAGGTCTTAAGCCAAAGCATGCCACTCACTCCGCACCAGGCAGTGCCTAGTGGAGAGAGGC  442
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  456  CCACCGTGAAGTTCAGGTCTTAAGCCAAAGCATGCCACTCACTCCGCACCAGGCAGTGCCTAGTGGAGAGAGGC  529

Query  443  CCTACATGTGTGTTGAGTGTGGGAAGTGCTTTGGCCGGAGTTCCCACCTCCTTCAGCATCAGCGTATCCACACT  516
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  530  CCTACATGTGTGTTGAGTGTGGGAAGTGCTTTGGCCGGAGTTCCCACCTCCTTCAGCATCAGCGTATCCACACT  603

Query  517  GGAGAGAAGCCCTATGTGTGCAGTGTATGTGGGAAGGCCTTCAGCCAGAGCTCAGTCCTTAGTAAACACAGGAG  590
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  604  GGAGAGAAGCCCTATGTGTGCAGTGTATGTGGGAAGGCCTTCAGCCAGAGCTCAGTCCTTAGTAAACACAGGAG  677

Query  591  AATTCACACAGGTGAGAAGCCCTATGAGTGTAATGAGTGTGGAAAAGCCTTTAGAGTGAGCTCAGATCTTGCTC  664
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  678  AATTCACACAGGTGAGAAGCCCTATGAGTGTAATGAGTGTGGAAAAGCCTTTAGAGTGAGCTCAGATCTTGCTC  751

Query  665  AGCATCACAAGATACATACAGGAGAGAAGCCTCACGAATGTCTTGAGTGTCGGAAAGCCTTCACTCAACTCTCA  738
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  752  AGCATCACAAGATACATACAGGAGAGAAGCCTCACGAATGTCTTGAGTGTCGGAAAGCCTTCACTCAACTCTCA  825

Query  739  CATCTCATTCAGCACCAGCGGATCCACACGGGAGAAAGGCCATATGTGTGTCCGTTGTGTGGGAAAGCCTTCAA  812
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  826  CATCTCATTCAGCACCAGCGGATCCACACGGGAGAAAGGCCATATGTGTGTCCGTTGTGTGGGAAAGCCTTCAA  899

Query  813  CCATAGCACTGTTCTGCGGAGCCACCAGAGGGTACACACTGGGGAGAAGCCTCACAGGTGCAATGAGTGTGGGA  886
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  900  CCATAGCACTGTTCTGCGGAGCCACCAGAGGGTACACACTGGGGAGAAGCCTCACAGGTGCAATGAGTGTGGGA  973

Query  887  AAACCTTCAGTGTGAAGAGGACACTGCTGCAGCACCAGAGGATCCACACCGGGGAGAAGCCCTACACGTGCAGC  960
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  974  AAACCTTCAGTGTGAAGAGGACACTGCTGCAGCACCAGAGGATCCACACCGGGGAGAAGCCCTACACGTGCAGC  1047

Query  961  GAGTGTGGGAAGGCCTTCAGCGACCGCTCAGTCCTCATTCAGCACCACAACGTGCACACCGGGGAGAAGCCCTA  1034
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1048  GAGTGTGGGAAGGCCTTCAGCGACCGCTCAGTCCTCATTCAGCACCACAACGTGCACACCGGGGAGAAGCCCTA  1121

Query 1035  TGAGTGCAGTGAGTGTGGGAAGACCTTCAGCCACCGCTCCACACTGATGAATCACGAGCGGATCCACACCGAGG  1108
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1122  TGAGTGCAGTGAGTGTGGGAAGACCTTCAGCCACCGCTCCACACTGATGAATCACGAGCGGATCCACACCGAGG  1195

Query 1109  AAAAGCCCTATGCATGCTACGAATGTGGGAAGGCCTTCGTTCAGCACTCACACCTGATCCAGCACCAGAGAGTC  1182
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1196  AAAAGCCCTATGCATGCTACGAATGTGGGAAGGCCTTCGTTCAGCACTCACACCTGATCCAGCACCAGAGAGTC  1269

Query 1183  CACACTGGGGAGAAGCCCTATGTGTGTGGTGAATGTGGGCACGCCTTCAGTGCACGCCGGTCTCTGATCCAGCA  1256
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1270  CACACTGGGGAGAAGCCCTATGTGTGTGGTGAATGTGGGCACGCCTTCAGTGCACGCCGGTCTCTGATCCAGCA  1343

Query 1257  TGAGAGAATCCACACAGGTGAAAAGCCCTTCCAGTGCACAGAATGTGGCAAAGCCTTCAGCCTGAAAGCAACTC  1330
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1344  TGAGAGAATCCACACAGGTGAAAAGCCCTTCCAGTGCACAGAATGTGGCAAAGCCTTCAGCCTGAAAGCAACTC  1417

Query 1331  TGATTGTGCACCTGAGGACCCACACGGGCGAGAAGCCATATGAGTGCAATAGCTGCGGGAAGGCCTTCAGCCAG  1404
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1418  TGATTGTGCACCTGAGGACCCACACGGGCGAGAAGCCATATGAGTGCAATAGCTGCGGGAAGGCCTTCAGCCAG  1491

Query 1405  TACTCAGTGCTCATCCAGCACCAGCGGATCCACACAGGCGAGAAGCCCTATGAGTGCGGGGAGTGTGGGCGTGC  1478
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1492  TACTCAGTGCTCATCCAGCACCAGCGGATCCACACAGGCGAGAAGCCCTATGAGTGCGGGGAGTGTGGGCGTGC  1565

Query 1479  CTTCAACCAGCATGGCCACCTAATCCAGCACCAGAAAGTGCACAGAAAGTTG  1530
            ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1566  CTTCAACCAGCATGGCCACCTAATCCAGCACCAGAAAGTGCACAGAAAGTTG  1617

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