Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12460
- Subject:
- NM_007869.3
- Aligned Length:
- 1670
- Identities:
- 885
- Gaps:
- 664
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTGGGTTCCCGGCTTCGGATCCGCGCGACTTCCCCAGCGCCGGCGCTCCGGGTTGGAGTCATCCTCGGTGCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCCGCTGTGGCTGCTGCTGCTGTTCCTGCTGGCAGCCGTGCGGCCAGTGCGCGCCTGGGAGAGCGGAGACCTGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGTTGTTCGACTTGGTGGAAGAGGTGCAGTTGAACTTCTACGAGTTCCTCGGGGTGCAGCAGGATGCTTCATCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCAGACATCAGAAAAGCATATCGTAAGCTTTCACTAACCTTACATCCAGACAAGAATAAAGATGAAAATGCAGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AACTCAATTTAGACAATTGGTGGCCATTTATGAAGTTTTAAAGGATGATGAAAGAAGGCAGAGGTATGATGATG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTCTGATCAATGGACTTCCAGATTGGCGACAGCCTGTATTCTACTACAGGCGAGTGAGAAAAATGAGCAATGCT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GAGCTGGCTTTGCTCTTGTTCATTATTCTCACAGTGGGTCACTATGCTGTGGTTTGGTCCATCTACCTGGAAAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCAACTGGATGAACTGCTTGGTAGAAAAAAGAGAGAAAGGAAGAAGAAGACAGGAAGCAAGAGTGTGGACGCAG 592
Query 1 --------------------------------------ATGAAACCACAGTGGCATGATTTGCTTCCATGCAAA 36
||.||||||||.||||||||||||||||||||||||
Sbjct 593 CAAAACTTGGTGCTTCTGAAAAGAACGAAAGATTGCTTATAAAACCACAATGGCATGATTTGCTTCCATGCAAA 666
Query 37 CTGGGGATTTGGTTTTGCCTTACACTAAAAGCATTACCTCACCTCATCCAGGATGCTGGGCAGTTTTATGCTAA 110
|||||||||||||||||||||||||||||||||||.|||||.||.||||||||||||||||||||||||||.||
Sbjct 667 CTGGGGATTTGGTTTTGCCTTACACTAAAAGCATTGCCTCATCTAATCCAGGATGCTGGGCAGTTTTATGCAAA 740
Query 111 ATATAAAGAAACAAGATTGAAGGAAAAGGAAGATGCACTGACTAGAACTGAACTTGAAACACTTCAAAAACAGA 184
||||||.||.||||.||||||||||||.|||||.||||||.||||||.||||.|||||||.|||||||||||||
Sbjct 741 ATATAAGGAGACAAAATTGAAGGAAAAAGAAGACGCACTGGCTAGAATTGAAATTGAAACCCTTCAAAAACAGA 814
Query 185 AG------AAAGTTAAAAAACCAAAACCTGAATTTCCTGTATACACACCTTTAGAAACTACATATATTCAGTCT 252
|| ||||||||||||||||||||.|||||||||||.||.|..||||||||||.|||.||||||||||||
Sbjct 815 AGAAAGTTAAAGTTAAAAAACCAAAACCAGAATTTCCTGTGTATATGCCTTTAGAAAATACGTATATTCAGTCT 888
Query 253 TATGATCATGGAACTTCCATAGAAGAAATTGAGGAACAAATGGATGATTGGTTGGAAAACAGGAACCGAACACA 326
|||||||||||||||||.||.||||||||||||||.|||||||||||.|||.|||||||||||||..|||||||
Sbjct 889 TATGATCATGGAACTTCTATTGAAGAAATTGAGGAGCAAATGGATGACTGGCTGGAAAACAGGAAAAGAACACA 962
Query 327 GAAAAAACAGGCACCTGAATGGACAGAAGAGGACCTCAGCCAACTGACAAGAAGTATGGTTAAGTTCCCAGGAG 400
|||||.|||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||
Sbjct 963 GAAAAGACAGGCACCTGAATGGACAGAAGAGGACCTCAGTCAACTGACAAGAAGTATGGTTAAGTTCCCAGGAG 1036
Query 401 GGACTCCAGGTCGATGGGAAAAGATTGCCCACGAATTGGGTCGATCTGTGACAGATGTGACAACCAAAGCCAAG 474
|||||||||||||||||||.|||||||||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GGACTCCAGGTCGATGGGACAAGATTGCCCATGAATTGGGTCGATCTGTGACAGATGTGACAACCAAAGCCAAG 1110
Query 475 CAACTGAAGGATTCAGTGACCTGCTCCCCAGGAATGGTTAGACTCTCCGAACTCAAATCGACAGTTCAGAATTC 548
.||||||||||.|||||.|||.|||||||.||||||...||.|||||.|||||.||.||.|..|.|||||||||
Sbjct 1111 GAACTGAAGGACTCAGTCACCAGCTCCCCCGGAATGACCAGGCTCTCTGAACTTAAGTCAAATGGTCAGAATTC 1184
Query 549 CAGGCCCATCAAAACGGCCACCACCTTGCCCGATGACATGATCACCCAGCGAGAGGACGCAGAGGGGG---TGG 619
||||||.|||||.|..|||||..|||||||.||||||||.|||||.|||||.||||||.|||..|||| ||
Sbjct 1185 CAGGCCAATCAAGATAGCCACAGCCTTGCCAGATGACATCATCACGCAGCGGGAGGACTCAGCAGGGGCCATG- 1257
Query 620 CAGCGGAGGAGGAGCAGGAGG-----GAGACTCCGGTGAGCAGGAGACCGGGGCCACTGATGCCCGGCCTCGGA 688
|.|||.||||||||.|||| ||| ||||||||||||.|.|.|.||||.||.|||||.|||||||
Sbjct 1258 --GAGGATGAGGAGCACGAGGCTGCTGAG-----GGTGAGCAGGAGTCAGCGACCACAGAAGCCCGACCTCGGA 1324
Query 689 GGCGGAAGCCAGCCA-GGCTGCTGGAGGCTACAGCGAAGCC-----GGAGCCAGAGGAGAAGTCCAGAGCCAAG 756
||||||||.|||||| |||.||| |||||| |.|.|| ||||||||||||||||...||||..|||
Sbjct 1325 GGCGGAAGTCAGCCAGGGCGGCT-GAGGCT-----GTAACCAGAGTGGAGCCAGAGGAGAAGCTGAGAGGAAAG 1392
Query 757 CGGCAGAAGGACTTTGACATAGCAGAACAAAACGAGTCCAGCGACGAGGAGAGCCTGAGAAAAGAGAGAGCTCG 830
.||||.||.||||||||.|||.|||||||||||||.|||||.|||||.||||..|...|||||||.|||.||||
Sbjct 1393 AGGCAAAAAGACTTTGATATATCAGAACAAAACGATTCCAGTGACGAAGAGAAACAACGAAAAGAAAGAACTCG 1466
Query 831 GTCTGCAGAGGAGCCGTGGACTCAAAATCAACAGAAACTTCTGGAACTGGCGTTGCAGCAGTACCCAAGGGGAT 904
..|||||||||||.||||||||||.|.|||.|||||||||||||||.||||.||.|||||.|||||.|..|||.
Sbjct 1467 TGCTGCAGAGGAGGCGTGGACTCAGAGTCAGCAGAAACTTCTGGAATTGGCATTACAGCAATACCCTAAAGGAG 1540
Query 905 CCTCTGACTGCTGGGACAAAATAGCCAGATGTGTCCCGTCCAAGAGCAAGGAAGACTGTATCGCTAGGTACAAG 978
|.||||||.||||||||||||||||||.||||||||||||.|||||.|||||||||||.||.|||||.||||||
Sbjct 1541 CTTCTGACCGCTGGGACAAAATAGCCAAATGTGTCCCGTCTAAGAGTAAGGAAGACTGCATTGCTAGATACAAG 1614
Query 979 TTGCTGGTTGAACTGGTCCAAAAGAAAAAACAAGCTAAAAGC 1020
.||||||||||||||||||||||||||||.||.|||||||||
Sbjct 1615 CTGCTGGTTGAACTGGTCCAAAAGAAAAAGCAGGCTAAAAGC 1656
