Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12460
- Subject:
- XR_865923.2
- Aligned Length:
- 3109
- Identities:
- 885
- Gaps:
- 2103
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTGCTAGGAGACGTGATGTCACCGGAAGCGAGGCCTGGGATAGGCTGAGGCCTGGGGAAACCTCTCCCACACGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCGCTTGGGTGCCAGCGCTGGCTCTCCAGCTGTTCCTAGGCCGGGGCGAGGGTCTAGAGAGGGAGAGCGGGCTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CGGCCGGTCTCCGCTCCCCAGCCGCCGGCTCCGCGGCAGTTAGTGCTTCCCTCGAGCCGGCAGCCTGGTTGGTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCTTCCGGGCGGCTGCCCGCGCTCCTGACTGACAGGCGCCGTCCGCACCGCCCGCGCCACCCGCCACGTCTCCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTCTCTGCCGGCGCACGGCGTGGCTGCCTGCCGACCGACCTCTTTGAGCCCAGCGCGATGTGGGTTCCCGGCTT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGGATCCGCGCGACTTCCCCAGCGCCGGCGCTCCGGGTTGGAGTCATCCTCGGTGCGGCCGCTGTGGCTGCTGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGCTGTTCCTGCTGGCAGCCGTGCGGCCAGTGCGCGCCTGGGAGAGCGGAGACCTGGAGTTGTTCGACTTGGTG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAAGAGGTGCAGTTGAACTTCTACGAGTTCCTCGGGGTGCAGCAGGATGCTTCATCTGCAGACATCAGAAAAGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ATATCGTAAGCTTTCACTAACCTTACATCCAGACAAGAATAAAGATGAAAATGCAGAAACTCAATTTAGACAAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGGTGGCCATTTATGAAGTTTTAAAGGATGATGAAAGAAGGCAGAGGTATGATGATGTTCTGATCAATGGACTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCAGATTGGCGACAGCCTGTATTCTACTACAGGCGAGTGAGAAAAATGAGCAATGCTGAGCTGGCTTTGCTCTT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GTTCATTATTCTCACAGTGGGTCACTATGCTGTGGTTTGGTCCATCTACCTGGAAAAGCAACTGGATGAACTGC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTGGTAGAAAAAAGAGAGAAAGGAAGAAGAAGACAGGAAGCAAGAGTGTGGACGCAGCAAAACTTGGTGCTTCT 962
Query 1 ---------------------ATGAAACCACAGTGGCATGATTTGCTTCCATGCAAACTGGGGATTTGGTTTTG 53
||.||||||||.|||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GAAAAGAACGAAAGATTGCTTATAAAACCACAATGGCATGATTTGCTTCCATGCAAACTGGGGATTTGGTTTTG 1036
Query 54 CCTTACACTAAAAGCATTACCTCACCTCATCCAGGATGCTGGGCAGTTTTATGCTAAATATAAAGAAACAAGAT 127
||||||||||||||||||.|||||.||.||||||||||||||||||||||||||.||||||||.||.||||.||
Sbjct 1037 CCTTACACTAAAAGCATTGCCTCATCTAATCCAGGATGCTGGGCAGTTTTATGCAAAATATAAGGAGACAAAAT 1110
Query 128 TGAAGGAAAAGGAAGATGCACTGACTAGAACTGAACTTGAAACACTTCAAAAACAGAAG------AAAGTTAAA 195
||||||||||.|||||.||||||.||||||.||||.|||||||.||||||||||||||| |||||||||
Sbjct 1111 TGAAGGAAAAAGAAGACGCACTGGCTAGAATTGAAATTGAAACCCTTCAAAAACAGAAGAAAGTTAAAGTTAAA 1184
Query 196 AAACCAAAACCTGAATTTCCTGTATACACACCTTTAGAAACTACATATATTCAGTCTTATGATCATGGAACTTC 269
|||||||||||.|||||||||||.||.|..||||||||||.|||.|||||||||||||||||||||||||||||
Sbjct 1185 AAACCAAAACCAGAATTTCCTGTGTATATGCCTTTAGAAAATACGTATATTCAGTCTTATGATCATGGAACTTC 1258
Query 270 CATAGAAGAAATTGAGGAACAAATGGATGATTGGTTGGAAAACAGGAACCGAACACAGAAAAAACAGGCACCTG 343
.||.||||||||||||||.|||||||||||.|||.|||||||||||||..||||||||||||.|||||||||||
Sbjct 1259 TATTGAAGAAATTGAGGAGCAAATGGATGACTGGCTGGAAAACAGGAAAAGAACACAGAAAAGACAGGCACCTG 1332
Query 344 AATGGACAGAAGAGGACCTCAGCCAACTGACAAGAAGTATGGTTAAGTTCCCAGGAGGGACTCCAGGTCGATGG 417
||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 AATGGACAGAAGAGGACCTCAGTCAACTGACAAGAAGTATGGTTAAGTTCCCAGGAGGGACTCCAGGTCGATGG 1406
Query 418 GAAAAGATTGCCCACGAATTGGGTCGATCTGTGACAGATGTGACAACCAAAGCCAAGCAACTGAAGGATTCAGT 491
||.|||||||||||.||||||||||||||||||||||||||||||||||||||||||.||||||||||.|||||
Sbjct 1407 GACAAGATTGCCCATGAATTGGGTCGATCTGTGACAGATGTGACAACCAAAGCCAAGGAACTGAAGGACTCAGT 1480
Query 492 GACCTGCTCCCCAGGAATGGTTAGACTCTCCGAACTCAAATCGACAGTTCAGAATTCCAGGCCCATCAAAACGG 565
.|||.|||||||.||||||...||.|||||.|||||.||.||.|..|.|||||||||||||||.|||||.|..|
Sbjct 1481 CACCAGCTCCCCCGGAATGACCAGGCTCTCTGAACTTAAGTCAAATGGTCAGAATTCCAGGCCAATCAAGATAG 1554
Query 566 CCACCACCTTGCCCGATGACATGATCACCCAGCGAGAGGACGCAGAGGGGG---TGGCAGCGGAGGAGGAGCAG 636
||||..|||||||.||||||||.|||||.|||||.||||||.|||..|||| || |.|||.||||||||.
Sbjct 1555 CCACAGCCTTGCCAGATGACATCATCACGCAGCGGGAGGACTCAGCAGGGGCCATG---GAGGATGAGGAGCAC 1625
Query 637 GAGG-----GAGACTCCGGTGAGCAGGAGACCGGGGCCACTGATGCCCGGCCTCGGAGGCGGAAGCCAGCCA-G 704
|||| ||| ||||||||||||.|.|.|.||||.||.|||||.|||||||||||||||.|||||| |
Sbjct 1626 GAGGCTGCTGAG-----GGTGAGCAGGAGTCAGCGACCACAGAAGCCCGACCTCGGAGGCGGAAGTCAGCCAGG 1694
Query 705 GCTGCTGGAGGCTACAGCGAAGCC-----GGAGCCAGAGGAGAAGTCCAGAGCCAAGCGGCAGAAGGACTTTGA 773
||.||| |||||| |.|.|| ||||||||||||||||...||||..|||.||||.||.||||||||
Sbjct 1695 GCGGCT-GAGGCT-----GTAACCAGAGTGGAGCCAGAGGAGAAGCTGAGAGGAAAGAGGCAAAAAGACTTTGA 1762
Query 774 CATAGCAGAACAAAACGAGTCCAGCGACGAGGAGAGCCTGAGAAAAGAGAGAGCTCGGTCTGCAGAGGAGCCGT 847
.|||.|||||||||||||.|||||.|||||.||||..|...|||||||.|||.||||..|||||||||||.|||
Sbjct 1763 TATATCAGAACAAAACGATTCCAGTGACGAAGAGAAACAACGAAAAGAAAGAACTCGTGCTGCAGAGGAGGCGT 1836
Query 848 GGACTCAAAATCAACAGAAACTTCTGGAACTGGCGTTGCAGCAGTACCCAAGGGGATCCTCTGACTGCTGGGAC 921
|||||||.|.|||.|||||||||||||||.||||.||.|||||.|||||.|..|||.|.||||||.||||||||
Sbjct 1837 GGACTCAGAGTCAGCAGAAACTTCTGGAATTGGCATTACAGCAATACCCTAAAGGAGCTTCTGACCGCTGGGAC 1910
Query 922 AAAATAGCCAGATGTGTCCCGTCCAAGAGCAAGGAAGACTGTATCGCTAGGTACAAGTTGCTGGTTGAACTGGT 995
||||||||||.||||||||||||.|||||.|||||||||||.||.|||||.||||||.||||||||||||||||
Sbjct 1911 AAAATAGCCAAATGTGTCCCGTCTAAGAGTAAGGAAGACTGCATTGCTAGATACAAGCTGCTGGTTGAACTGGT 1984
Query 996 CCAAAAGAAAAAACAAGCTAAAAGC------------------------------------------------- 1020
||||||||||||.||.|||||||||
Sbjct 1985 CCAAAAGAAAAAGCAGGCTAAAAGCTGAATCTTCTGGAAGGTGACGATCAATGACCATCATTTTCCAAACAAGT 2058
Query 1021 -------------------------------------------------------------------------- 1020
Sbjct 2059 ACTCGAGAAATCTCATGCAGAAACTTATATTTTGTACCTCAGTATTTCTAAACATCATGTGCCTTAGTAAAAAA 2132
Query 1021 -------------------------------------------------------------------------- 1020
Sbjct 2133 AAGAAAGGAAGAAAGAAAGAAAGAAAAAGAGAGGGGGGGGAGAAAGAAAGAAAAAAAGAAAGAAAGAATGAATC 2206
Query 1021 -------------------------------------------------------------------------- 1020
Sbjct 2207 AATTATAGATGCTGTAAGGTGCCATTTACAGGCCTTCCTTGTGTTTCCAGGGGAGAGTGTGGTGCCAAAAATAT 2280
Query 1021 -------------------------------------------------------------------------- 1020
Sbjct 2281 GAGGTCCTCTGTTGGCCAGCGAAGGAGGGAAAAACAGGTGCACCAGGTGGAATTTGAGATAAAGCAAATAAGTT 2354
Query 1021 -------------------------------------------------------------------------- 1020
Sbjct 2355 TGATTGTCAAATGAGAAATTTAAGCCTGGAAGGTGGTTCAGTGGATAAAACCGCTGACTGCTAAGCCTGCCAGT 2428
Query 1021 -------------------------------------------------------------------------- 1020
Sbjct 2429 CTGCACTCACTCTCCAGCAAGCACATGTTCACAGGAGCTGTCCTCTGACCTCTGCATTCATATTGTGGTACAGC 2502
Query 1021 -------------------------------------------------------------------------- 1020
Sbjct 2503 ACACACATCCGAGCCCACATAGACACATGCACATGAATACATGGATCTAAAATTTTTAAAGAATTTCTTGCTTT 2576
Query 1021 -------------------------------------------------------------------------- 1020
Sbjct 2577 TGTTTGAAACTTGAAAACGCTTTGGGCTTGTTCTTCAGTTTTGTTGTGTTTTGGAGAGAATGCTTTGCTTTTGT 2650
Query 1021 -------------------------------------------------------------------------- 1020
Sbjct 2651 GTATGTCTGTGTACCAGAAGACGACATTGGATCCCATAGATCTGTTGTATGGATGGCTGTAAGTCACCATGTAT 2724
Query 1021 -------------------------------------------------------------------------- 1020
Sbjct 2725 GTAGGTGATGGAAATTGAACTTCAGTCCAGCCCCTTGTTTGAAACTTTAGAAGGAAACTTCAAACTGCTGCCAA 2798
Query 1021 -------------------------------------------------------------------------- 1020
Sbjct 2799 GCAAGAGATGTGCTCCACTGGCTACAGTGTGCTGTTTGTGGTCATGCCCAGTTCTACACAATGACACCTCAGTA 2872
Query 1021 -------------------------------------------------------------------------- 1020
Sbjct 2873 CCCAGTATGTTACTGTTAGCAGGTGCCTACAGAAAAACAAAGTGAGCCGGGCATCCTGGAGCTGGAGTGACAGG 2946
Query 1021 -------------------------------------------------------------------------- 1020
Sbjct 2947 TGCTGAGAGCAGCGGGGCTTTGGATGCTGTTGGTGTGGACATCTCTGCAGCACAGCAACTGATTTTCTCAAGGA 3020
Query 1021 -------------------------------------------------------------------------- 1020
Sbjct 3021 ATCTGGAATAATGTTAGGAATTCTGCCCTAATTTTGTGTATTTTACCATATCAAAAATGTGACTCCATTTTAAA 3094
Query 1021 - 1020
Sbjct 3095 A 3095
