Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_12542
• Subject: XM_011246575.2
• Aligned Length: 1585
• Identities: 1099
• Gaps: 284

Alignment

Query    1  ATGCGGGGGAGCCCGGGCGACGCGGAGCGGCGGCAGCGCTGGGGTCGCCTGTTCGAGGAGCTGGACAGTAACAA  74
            |||||||||.||.|..|||||||||||||||||||||||||||||||||||||||||||.||.|||||.|||||
Sbjct    1  ATGCGGGGGGGCTCAAGCGACGCGGAGCGGCGGCAGCGCTGGGGTCGCCTGTTCGAGGAACTAGACAGCAACAA  74

Query   75  GGATGGCCGCGTGGACGTGCACGAGTTGCGCCAGGGGCTGGCCAGGCTGGGCGGGGGCAACCCAGACCCCGGCG  148
            |||.|||||||||||||||||||||||||||||||||||||||||||||||..||||..|.||.||||   |.|
Sbjct   75  GGACGGCCGCGTGGACGTGCACGAGTTGCGCCAGGGGCTGGCCAGGCTGGGAAGGGGAGATCCGGACC---GTG  145

Query  149  CCCAACAGGGTATCTCCTCTGAGGGTGATGCTGACCCAGATGGCGGGCTCGACCTGGAGGAATTTTCCCGCTAT  222
            |.||.||||||.||||||||||..|.||||||||.||.|||||.||.|||..|||||||||.|||.|.|||||.
Sbjct  146  CACAGCAGGGTGTCTCCTCTGACTGGGATGCTGATCCTGATGGTGGCCTCAGCCTGGAGGAGTTTACTCGCTAC  219

Query  223  CTGCAGGAGCGGGAACAGCGTCTGCTGCTCATGTTTCACAGTCTTGACCGGAACCAGGATGGTCACATTGATGT  296
            ||||||||.|||||.|||||.||.|||||||||||||||||.||||||||||||||.|||||||||||.|||||
Sbjct  220  CTGCAGGAACGGGAGCAGCGCCTTCTGCTCATGTTTCACAGCCTTGACCGGAACCAAGATGGTCACATAGATGT  293

Query  297  CTCTGAGATCCAACAGAGTTTCCGAGCTCTGGGCATTTCCATCTCGCTGGAGCAGGCTGAGAAAATTTTGCACA  370
            |||||||||.||||||||.||||||||.||.||.||.||||||||.||||||||.||.||||||||..|.||||
Sbjct  294  CTCTGAGATTCAACAGAGCTTCCGAGCACTAGGTATCTCCATCTCACTGGAGCAAGCAGAGAAAATCCTACACA  367

Query  371  GCATGGACCGAGACGGCACAATGACCATTGACTGGCAAGAATGGCGCGACCACTTCCTGTTGCATTCGCTGGAA  444
            ||||||||||.||.|||||.|||||||||||.|||||.||||||||.||||||||.||||||||.||.|||||.
Sbjct  368  GCATGGACCGCGATGGCACCATGACCATTGATTGGCAGGAATGGCGAGACCACTTTCTGTTGCACTCTCTGGAG  441

Query  445  AATGTGGAGGACGTGCTGTATTTCTGGAAGCATTCCACGCTCTCTTCTGCTGGGTTCTCTGCCTGGATAAAAGA  518
            ||.||||||||.||.||||||||||||||||||||.||                                    
Sbjct  442  AACGTGGAGGATGTCCTGTATTTCTGGAAGCATTCTAC------------------------------------  479

Query  519  TTCTACGGCTGAACAGAATCGTTCAAAAACCACGGTCTTGGCCAGGCGCAGTGGCTCACACCTGAAATCCCAGC  592
                                                                                      
Sbjct  480  --------------------------------------------------------------------------  479

Query  593  ACTTTGGGAGGCCGAAGTGGGCGGATCACGAGGTCCTGGACATTGGCGAGTGCCTGACAGTGCCGGACGAGTTC  666
                                           .|||||||||||.||.||.||||||||.|||||.||.||||||
Sbjct  480  -------------------------------AGTCCTGGACATCGGTGAATGCCTGACGGTGCCTGATGAGTTC  522

Query  667  TCAAAGCAAGAGAAGCTGACGGGCATGTGGTGGAAACAGCTGGTGGCCGGCGCAGTGGCAGGTGCCGTGTCACG  740
            ||..||.|||||||.||.||.||.|||||||||||||||||||||||.||.||||||||.||.||.||||||||
Sbjct  523  TCCCAGGAAGAGAAACTTACAGGAATGTGGTGGAAACAGCTGGTGGCTGGTGCAGTGGCTGGCGCTGTGTCACG  596

Query  741  GACAGGCACGGCCCCTCTGGACCGCCTCAAGGTCTTCATGCAGGTCCATGCCTCAAAGACCAACCGGCTGAACA  814
            |||||||||.||.|||||||||||.||||||||.||||||||||||||.|||||||||.||||||||||.||||
Sbjct  597  GACAGGCACAGCTCCTCTGGACCGACTCAAGGTATTCATGCAGGTCCACGCCTCAAAGTCCAACCGGCTTAACA  670

Query  815  TCCTTGGGGGGCTTCGAAGCATGGTCCTTGAGGGAGGCATCCGCTCCCTGTGGCGCGGCAATGGTATTAATGTA  888
            |.||.|||||.||..|||.||||.|.|..||.||.||..||...|||||.|||||.|||||.||.||.||.||.
Sbjct  671  TTCTAGGGGGCCTGAGAAACATGATTCAAGAAGGGGGTGTCTTGTCCCTCTGGCGGGGCAACGGCATCAACGTG  744

Query  889  CTCAAGATTGCCCCCGAGTCAGCTATCAAGTTCATGGCCTATGAACAGATCAAGAGGGCCATCCTGGGGCAGCA  962
            ||||||||.|||||||||||.||.|||||.||||||||.|||||||||||||||.|||||||||.||||||.||
Sbjct  745  CTCAAGATAGCCCCCGAGTCTGCCATCAAATTCATGGCTTATGAACAGATCAAGCGGGCCATCCGGGGGCAACA  818

Query  963  GGAGACACTGCATGTGCAGGAGCGCTTCGTGGCTGGCTCCCTGGCTGGTGCCACAGCCCAAACCATCATTTACC  1036
            ||||||||||||.||.||||||||||||||||||||.||||||||.||.||||||||.|||||||||||.||||
Sbjct  819  GGAGACACTGCACGTTCAGGAGCGCTTCGTGGCTGGTTCCCTGGCCGGGGCCACAGCTCAAACCATCATATACC  892

Query 1037  CTATGGAGGTG---------------------------------------CTGAAGACGCGGCTGACCTTGCGC  1071
            |.|||||||||                                       ||.|||||.||||||||..|.|||
Sbjct  893  CCATGGAGGTGAGAAGGAGGGGCTGGAGGAAGATCCAGCATGGGAGGGTACTAAAGACTCGGCTGACTCTACGC  966

Query 1072  CGGACGGGCCAGTATAAGGGGCTGCTGGACTGCGCCAGGCGTATCCTGGAGAGGGAGGGGCCCCGTGCCTTCTA  1145
            .|.||.|||||.||.||||||||.|||||.||.||.|.|||.|||.|.||..|.||.||||||||.||||||||
Sbjct  967  AGAACTGGCCAATACAAGGGGCTCCTGGATTGTGCAAAGCGGATCTTAGAACGTGAAGGGCCCCGCGCCTTCTA  1040

Query 1146  CCGCGGCTACCTCCCCAACGTGCTGGGCATCATCCCCTATGCGGGCATCGACCTGGCCGTCTACGAGACTCTGA  1219
            |||.||||||||.||.||.|||||||||||||||||||||||.||.||||||||.||.|||||||||||.||||
Sbjct 1041  CCGTGGCTACCTGCCTAATGTGCTGGGCATCATCCCCTATGCAGGAATCGACCTAGCTGTCTACGAGACCCTGA  1114

Query 1220  AGAACTGGTGGCTTCAGCAGTACAGCCACGACTCGGCAGACCCAGGCATCCTCGTGCTCCTGGCCTGCGGTACC  1293
            ||||..|.|||||||||||||||||||||||.||.||..||||||||||.|||||||||||.|.|||.||.|||
Sbjct 1115  AGAATCGCTGGCTTCAGCAGTACAGCCACGAATCCGCTAACCCAGGCATTCTCGTGCTCCTAGGCTGTGGCACC  1188

Query 1294  ATATCCAGCACCTGCGGCCAGATAGCCAGTTACCCGCTGGCCCTGGTCCGGACCCGCATGCAGGCACAAG----  1363
            ||.|||||||||||.||||||||.|||||||||||.|||||.||||||||.|||||.||||||||.||||    
Sbjct 1189  ATCTCCAGCACCTGTGGCCAGATTGCCAGTTACCCTCTGGCACTGGTCCGTACCCGAATGCAGGCCCAAGCCTC  1262

Query 1364  ---------------GCTGGAGTACA--GTGGCTCGATTT---CAGATCACTG---CA--------------AC  1400
                           ||.||..|.||  ||||.||.|.||   ||.||| |||   ||              .|
Sbjct 1263  CATTGAGGGTGGCCCGCAGGTCTCCATGGTGGGTCTACTTCGACACATC-CTGTCCCAGGAGGGTGTATGGGGC  1335

Query 1401  CTCT------GCCTT----CCAGGTTCAAGCGATTC--TCCTGCC-TCAGC--CTCC-----------AGAG--  1446
            ||||      ||.||    |||..||||.|....||  |||.||| |.|||  ||||           .|||  
Sbjct 1336  CTCTACCGGGGCATTGCCCCCAACTTCATGAAGGTCATTCCAGCCGTGAGCATCTCCTACGTGGTCTACGAGAA  1409

Query 1447  -------------------------------  1446
                                           
Sbjct 1410  CATGAAGCAGGCTCTGGGGGTCACATCCAGG  1440