Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12542
- Subject:
- XM_011528275.2
- Aligned Length:
- 1872
- Identities:
- 1305
- Gaps:
- 567
Alignment
Query 1 ATGCGGGGGAGCCCGGGCGACGCGGAGCGGCGGCAGCGCTGGGGTCGCCTGTTCGAGGAGCTGGACAGTAACAA 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGCGGGGGAGCCCGGGCGACGCGGAGCGGCGGCAGCGCTGGGGTCGCCTGTTCGAGGAGCTGGACAGTAACAA 74
Query 75 GGATGGCCGCGTGGACGTGCACGAGTTGCGCCAGGGGCTGGCCAGGCTGGGCGGGGGCAACCCAGACCCCGGCG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GGATGGCCGCGTGGACGTGCACGAGTTGCGCCAGGGGCTGGCCAGGCTGGGCGGGGGCAACCCAGACCCCGGCG 148
Query 149 CCCAACAGGGTATCTCCTCTGAGGGTGATGCTGACCCAGATGGCGGGCTCGACCTGGAGGAATTTTCCCGCTAT 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CCCAACAGGGTATCTCCTCTGAGGGTGATGCTGACCCAGATGGCGGGCTCGACCTGGAGGAATTTTCCCGCTAT 222
Query 223 CTGCAGGAGCGGGAACAGCGTCTGCTGCTCATGTTTCACAGTCTTGACCGGAACCAGGATGGTCACATTGATGT 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CTGCAGGAGCGGGAACAGCGTCTGCTGCTCATGTTTCACAGTCTTGACCGGAACCAGGATGGTCACATTGATGT 296
Query 297 CTCTGAGATCCAACAGAGTTTCCGAGCTCTGGGCATTTCCATCTCGCTGGAGCAGGCTGAGAAAATTTTGCACA 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CTCTGAGATCCAACAGAGTTTCCGAGCTCTGGGCATTTCCATCTCGCTGGAGCAGGCTGAGAAAATTTTGCACA 370
Query 371 GCATGGACCGAGACGGCACAATGACCATTGACTGGCAAGAATGGCGCGACCACTTCCTGTTGCATTCGCTGGAA 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GCATGGACCGAGACGGCACAATGACCATTGACTGGCAAGAATGGCGCGACCACTTCCTGTTGCATTCGCTGGAA 444
Query 445 AATGTGGAGGACGTGCTGTATTTCTGGAAGCATTCCACGCTCTCTTCTGCTGGGTTCTCTGCCTGGATAAAAGA 518
||||||||||||||||||||||||||||||||||||||
Sbjct 445 AATGTGGAGGACGTGCTGTATTTCTGGAAGCATTCCAC------------------------------------ 482
Query 519 TTCTACGGCTGAACAGAATCGTTCAAAAACCACGGTCTTGGCCAGGCGCAGTGGCTCACACCTGAAATCCCAGC 592
Sbjct 483 -------------------------------------------------------------------------- 482
Query 593 ACTTTGGGAGGCCGAAGTGGGCGGATCACGAGGTCCTGGACATTGGCGAGTGCCTGACAGTGCCGGACGAGTTC 666
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 483 -------------------------------GGTCCTGGACATTGGCGAGTGCCTGACAGTGCCGGACGAGTTC 525
Query 667 TCAAAGCAAGAGAAGCTGACGGGCATGTGGTGGAAACAGCTGGTGGCCGGCGCAGTGGCAGGTGCCGTGTCACG 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 526 TCAAAGCAAGAGAAGCTGACGGGCATGTGGTGGAAACAGCTGGTGGCCGGCGCAGTGGCAGGTGCCGTGTCACG 599
Query 741 GACAGGCACGGCCCCTCTGGACCGCCTCAAGGTCTTCATGCAGGTCCATGCCTCAAAGACCAACCGGCTGAACA 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 600 GACAGGCACGGCCCCTCTGGACCGCCTCAAGGTCTTCATGCAGGTCCATGCCTCAAAGACCAACCGGCTGAACA 673
Query 815 TCCTTGGGGGGCTTCGAAGCATGGTCCTTGAGGGAGGCATCCGCTCCCTGTGGCGCGGCAATGGTATTAATGTA 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 674 TCCTTGGGGGGCTTCGAAGCATGGTCCTTGAGGGAGGCATCCGCTCCCTGTGGCGCGGCAATGGTATTAATGTA 747
Query 889 CTCAAGATTGCCCCCGAGTCAGCTATCAAGTTCATGGCCTATGAACAGATCAAGAGGGCCATCCTGGGGCAGCA 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 748 CTCAAGATTGCCCCCGAGTCAGCTATCAAGTTCATGGCCTATGAACAGATCAAGAGGGCCATCCTGGGGCAGCA 821
Query 963 GGAGACACTGCATGTGCAGGAGCGCTTCGTGGCTGGCTCCCTGGCTGGTGCCACAGCCCAAACCATCATTTACC 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 822 GGAGACACTGCATGTGCAGGAGCGCTTCGTGGCTGGCTCCCTGGCTGGTGCCACAGCCCAAACCATCATTTACC 895
Query 1037 CTATGGAGGTGCTGAAGACGCGGCTGACCTTGCGCCGGACGGGCCAGTATAAGGGGCTGCTGGACTGCGCCAGG 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 896 CTATGGAGGTGCTGAAGACGCGGCTGACCTTGCGCCGGACGGGCCAGTATAAGGGGCTGCTGGACTGCGCCAGG 969
Query 1111 CGTATCCTGGAGAGGGAGGGGCCCCGTGCCTTCTACCGCGGCTACCTCCCCAACGTGCTGGGCATCATCCCCTA 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 970 CGTATCCTGGAGAGGGAGGGGCCCCGTGCCTTCTACCGCGGCTACCTCCCCAACGTGCTGGGCATCATCCCCTA 1043
Query 1185 TGCGGGCATCGACCTGGCCGTCTACGAGACTCTGAAGAACTGGTGGCTTCAGCAGTACAGCCACGACTCGGCAG 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1044 TGCGGGCATCGACCTGGCCGTCTACGAGACTCTGAAGAACTGGTGGCTTCAGCAGTACAGCCACGACTCGGCAG 1117
Query 1259 ACCCAGGCATCCTCGTGCTCCTGGCCTGCGGTACCATATCCAGCACCTGCGGCCAGATAGCCAGTTACCCGCTG 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1118 ACCCAGGCATCCTCGTGCTCCTGGCCTGCGGTACCATATCCAGCACCTGCGGCCAGATAGCCAGTTACCCGCTG 1191
Query 1333 GCCCTGGTCCGGACCCGCATGCAGGCACA--------------------------------------------- 1361
|||||||||||||||||||||||||||||
Sbjct 1192 GCCCTGGTCCGGACCCGCATGCAGGCACAAGCCTCCATCGAGGGTGGCCCCCAGCTGTCCATGCTGGGTCTGCT 1265
Query 1362 -------------------------------------------------------------------------- 1361
Sbjct 1266 ACGTCACATCCTGTCCCAGGAGGGCATGCGGGGCCTCTACCGGGGGATCGCCCCCAACTTCATGAAGGTTATTC 1339
Query 1362 --------------------------------------------------------------AGGCTGGAGTAC 1373
||||||||||||
Sbjct 1340 CAGCTGTGAGCATCTCCTATGTGGTCTACGAGAACATGAAGCAGGCCTTGGGGGTCACGTCCAGGCTGGAGTAC 1413
Query 1374 AGTGGCTCGATTTCAGATCACTGCAACCTCTGCCTTCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCAGAG- 1446
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1414 AGTGGCTCGATTTCAGATCACTGCAACCTCTGCCTTCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCAGAGT 1487
Query 1447 -------------------------------------------------------------------------- 1446
Sbjct 1488 AGCTGGTATTACAGGATTTCATCATGTTGCCCAGGCTCATCTCGAACTCGTGGGGTCAAGGAATTCGCCAGCCT 1561
Query 1447 -------------------------------------------------------------------------- 1446
Sbjct 1562 TCAGCCTCCCAACGTGCTGGGATTACAGCCGGTGGTCATGCCATGAGCAGCCTTATGGAGAGGACCATGTGGTA 1635
Query 1447 -------------------------------------------------------------------------- 1446
Sbjct 1636 AGGAACTCAGCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGGCCAACATCTCACTGCAAT 1709
Query 1447 ---------------------- 1446
Sbjct 1710 TCTATCAGTTGAATTCCCTGGA 1731
