Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12570
- Subject:
- XM_006525949.1
- Aligned Length:
- 3231
- Identities:
- 1814
- Gaps:
- 1173
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAGGCCTTTACGGAAAAGCGTTTGAGGATTCCACAAGCATCGGGTCTTAATGTGGAAATGAGTTCCCAGCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTTTCCTCGGTTAGGAACCCCTTCCCCTGGGCTTAGCCAGCCACCTTCACAGATTGCAAGCAGTGGTTCCGCAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GACTGATAAACCAAGTTGCCACAGTTAATGATGAGGCTGGCCGAGATGCTGATGTTGGTACCAGGGAGCACGTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGCCCTAGCAGCTCCCTGCCGCCCCGGGAAGAGAAGCAGGAGCCAGTTGTGGTAAGGCCCTATCCACAGGTACA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GATGCTGCCTGCACACCATGCTGTCGCCTCAGCCACCCCTGTCGCAGTGACAGCCCCGCCAGCACACCTGACAC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CAGCAGTACCACTCTCTTTTTCGGAAGGACTTATGAAGCCGCCCCCGAAGCCTACCATGCCTAGCCGTCCCATT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCGCCTGCTCCCCCTTCTACCATGTCACTTCCCCCGAAAGTTCCCGGGCAGGTTACTGTTACCATGGAGAGCAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CATCCCTCAAGCTTCAGCCATTCCCGTGGCAACAATCAGTGGACAACAGGGGCATCCCAGTAACCTGCATCACA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTATGACCACAAATGTGCAGATGTCCATAATCCGCAGCAACGCTCCCGGGCCCCCACTTCACATTGGAGCTTCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CACTTACCTCGAGGTGCAGCTGCTGCCGCTGTGATGTCCAGCTCTAAAGTAACTACAGTCCTGAGGCCAACTTC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACAGCTGCCAAATGCTGCTACGGCGCAGCCAGCAGTACAGCACCTCATTCACCAGCCAATCCAGTCTCGGCCAC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTGTGACCACCTCCAGTACAATCCCTCCTGCTGTAGTAGCAACAGTCTCAGCCACCAGAGCGCAGTCTCCTGTC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATCACTACGACAGCGGCCCACGCGGCTGACTCGACGCTCAGTCGGCCCACTTTATCTATCCAGCATCCACCATC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGCAGCCATTAGTATCCAGCGTCCTGCACAGTCTCGAGATGTGACAACAAGAATCACACTACCTTCTCATCCTG 1036
Query 1 --------------------------------ATGGCTCAGAAAACAATCTTCAGTACTGGCACGCCAGTGGCT 42
||||||||||||||.|||||.|||||||||||.|||||||||
Sbjct 1037 CGTTAGGGACTCCGAAACAGCAGCTCCATACAATGGCTCAGAAAACCATCTTTAGTACTGGCACACCAGTGGCT 1110
Query 43 GCAGCCACAGTAGCACCTATTTTGGCAACCAACACCATTCCTTCAGCGACCACAGCTGGATCTGTGTCACACAC 116
|||||.|||||||||||||||.|||||||||||||..||||||||.|.||||||||||||||||||||.|||||
Sbjct 1111 GCAGCTACAGTAGCACCTATTCTGGCAACCAACACGCTTCCTTCAACAACCACAGCTGGATCTGTGTCGCACAC 1184
Query 117 GCAAGCTCCCACAAGTACCATTGTTACCATGACAGTACCCTCCCATTCCTCCCATGCTACTGCTGTGACCACCT 190
.|||||||||||||||||.|||||||||||||||.|.|||||||||||.|||||||||||||||||||||||.|
Sbjct 1185 ACAAGCTCCCACAAGTACAATTGTTACCATGACAATGCCCTCCCATTCATCCCATGCTACTGCTGTGACCACTT 1258
Query 191 CAAACATCCCAGTCGCCAAGGTGGTGCCCCAGCAGATCACGCACACTTCTCCTCGGATCCAGCCAGACTACCCT 264
||||.||||||||.||.|||||||||||||||||||||||.||||||||.||||||||||||||.||.||||||
Sbjct 1259 CAAATATCCCAGTTGCTAAGGTGGTGCCCCAGCAGATCACACACACTTCCCCTCGGATCCAGCCTGATTACCCT 1332
Query 265 GCCGAGAGGAGTAGCCTGATTCCCATCTCCGGACATCGGGCCTCTCCCAATCCTGTGGCCATGGAAACCCGAAG 338
.|.|||||||||||||||||||||||.|||||.||||||||||||||.|||||.|||||||||||||||||||.
Sbjct 1333 CCAGAGAGGAGTAGCCTGATTCCCATTTCCGGCCATCGGGCCTCTCCAAATCCAGTGGCCATGGAAACCCGAAA 1406
Query 339 TGACAACAGACCGTCTGTTCCCGTTCAGTTCCAATATTTTTTGCCAACTTACCCCCCTTCTGCATACCCACTGG 412
||||||||||||.||.|||||.|||||||||||.||.||.||||||||||||||.||.|||||.|||||.||||
Sbjct 1407 TGACAACAGACCTTCCGTTCCTGTTCAGTTCCAGTACTTCTTGCCAACTTACCCACCCTCTGCCTACCCGCTGG 1480
Query 413 CGGCACATACCTACACCCCAATCACCAGTTCCGTGTCCACTATCCGACAGTATCCAGTTTCAGCTCAGGCTCCA 486
|.|||||.|||||||||||.||||||||.||.||||||||||||||.|||||.||||||||.|||||.||.|||
Sbjct 1481 CTGCACACACCTACACCCCCATCACCAGCTCTGTGTCCACTATCCGGCAGTACCCAGTTTCTGCTCAAGCCCCA 1554
Query 487 AACTCTGCCATCACAGCTCAGACTGGTGTTGGGGTAGCGTCTACCGTCCACCTAAACCCCATGCAGTTGATGAC 560
|||||..|||||||||||||.|||||||||||.|||||.|||||.||||||||.||||||||||||.|||||||
Sbjct 1555 AACTCCACCATCACAGCTCAAACTGGTGTTGGTGTAGCATCTACAGTCCACCTGAACCCCATGCAGCTGATGAC 1628
Query 561 AGTGGATGCATCGCATGCTCGACATATTCAAGGGATCCAGCCAGCACCCATCAGTACCCAGGGTATCCAGCCGG 634
|||||||||.||.|||||.||||||||.||.||||||||||||||||||||||||||.|||||.||||||||.|
Sbjct 1629 AGTGGATGCCTCACATGCCCGACATATCCAGGGGATCCAGCCAGCACCCATCAGTACACAGGGAATCCAGCCAG 1702
Query 635 CCCCCATTGGGACCCCAGGGATACAGCCTGCACCACTTGGCACACAGGGAATTCACTCAGCAACCCCAATCAAC 708
|||||||||||||..|||||||.|||||.||||||.|||||||.|..|||||.||.||||||.|||||||||||
Sbjct 1703 CCCCCATTGGGACATCAGGGATCCAGCCAGCACCAATTGGCACCCCAGGAATCCATTCAGCAGCCCCAATCAAC 1776
Query 709 ACACAAGGGCTTCAGCCTGCACCTATGGGTACTCAGCAGCCTCAGCCTGAAGGAAAGACTTCAGCAGTGGTGTT 782
||.||.|||||||||||.|||.|.||||.||.|||||||||.||||||||.||.||.||.||||||||||||||
Sbjct 1777 ACTCAGGGGCTTCAGCCAGCAGCAATGGCTAATCAGCAGCCACAGCCTGAGGGGAAAACCTCAGCAGTGGTGTT 1850
Query 783 GGCAGATGGAGCCACAATTGTGGCCAACCCTATTAGCAATCCATTCAGTGCTGCTCCAGCAGCAACAACCGTGG 856
||||||||||||.||||||||.|||||||||||||||||.||||||||||||||||||||.|||||.||.||||
Sbjct 1851 GGCAGATGGAGCTACAATTGTAGCCAACCCTATTAGCAACCCATTCAGTGCTGCTCCAGCGGCAACCACAGTGG 1924
Query 857 TGCAGACCCACAGCCAGAGTGCTAGCACCAACGCTCCCGCCCAGGGCTCATCGCCACGGCCAAGCATACTCCGG 930
|.|||||.|||||.||||||||||||||||||.|.||.|||||||||||.||.||.|||||.||||||||.|||
Sbjct 1925 TCCAGACACACAGTCAGAGTGCTAGCACCAACACACCAGCCCAGGGCTCTTCTCCCCGGCCCAGCATACTGCGG 1998
Query 931 AAGAAACCTGCCACAGAT-------------------------------------------------------- 948
||||||||||||||||||
Sbjct 1999 AAGAAACCTGCCACAGATGGGATGGCAGTCCGGAAAACTCTCCTCCCTCCTCAGCCTCCTGACGTGGCTACTCC 2072
Query 949 -------------------------------------------------GGTGCCAAACCCAAGTCTGAAATCC 973
|||||||||||.||.||.|||.|.|
Sbjct 2073 TCGAGTAGAAAGCTCTATGCGGAGTGCTTCTGGGTCACCTAGACCTGCAGGTGCCAAACCTAAATCCGAAGTGC 2146
Query 974 ACGTGTCTATGGCCACTCCGGTCACTGTGTCCATGGAGACTGTATCCAATCAAAATAATGATCAGCCTACCATT 1047
|.||||||||.||||||||.||.||.||||||.|||||||..||||||||||||||...||.|||||||||.||
Sbjct 2147 ATGTGTCTATAGCCACTCCAGTTACAGTGTCCTTGGAGACCATATCCAATCAAAATGCCGAACAGCCTACCGTT 2220
Query 1048 GCCGTCCCTCCAACTGCCCAGCAGCCCCCACCGACCATTCCAACTATGATTGCAGCAGCCAGTCCCCCGTCACA 1121
||.||||||||.||||||||||||||.||||||||||||||.|..||||||||.|||||||||||.||.||.||
Sbjct 2221 GCTGTCCCTCCGACTGCCCAGCAGCCTCCACCGACCATTCCCAGCATGATTGCGGCAGCCAGTCCTCCATCCCA 2294
Query 1122 ACCAGCCGTTGCCCTTTCAACCATTCCTGGAGCGGTCCCCATCACTCCACCCATCACCACCATTGCAGCTGCAC 1195
|||||||.||||||||||.||||||||.|||||.||.||..|||||||||||||||||||||||||.||..|||
Sbjct 2295 ACCAGCCATTGCCCTTTCCACCATTCCCGGAGCCGTGCCTGTCACTCCACCCATCACCACCATTGCTGCCACAC 2368
Query 1196 CACCTCCATCAGTCACTGTGGGTGGCAGTCTTTCCTCCGTCTTGGGCCCTCCCGTTCCTGAAATTAAAGTGAAA 1269
||.|.|..||||.|.|.|||||.||||.||.||||.|.|||.||||.|||||.||||||||.||.||||||||.
Sbjct 2369 CAACGCTGTCAGCCCCAGTGGGCGGCACTCCTTCCACGGTCCTGGGGCCTCCTGTTCCTGAGATCAAAGTGAAG 2442
Query 1270 GAAGAAGTAGAACCAATGGATATCATGAGGCCAGTTTCTGCAGTTCCTCCACTGGCTACCAACACTGTGTCTCC 1343
|||||||..||.|||.||||.||||..|||||.||.||..||||.|||||.|||||.||||||||.||||||||
Sbjct 2443 GAAGAAGCGGAGCCAGTGGACATCACCAGGCCTGTCTCCACAGTCCCTCCTCTGGCCACCAACACGGTGTCTCC 2516
Query 1344 ATCTCTTGCATTGCTGGCAAACAACTTGTCCATGCCTACAAGTGACCTACCACCTGGTGCCTCCCCAAGGAAAA 1417
|||||||||.||||||||||.||||.|||||||||||.||||||||||.|||||||||||||||||||||||||
Sbjct 2517 ATCTCTTGCTTTGCTGGCAAGCAACCTGTCCATGCCTCCAAGTGACCTCCCACCTGGTGCCTCCCCAAGGAAAA 2590
Query 1418 AGCCTCGAAAGCAACAGCATGTGATCTCAACAGAAGAAGGTGACATGATGGAGACAAACAGCACTGATGATGAG 1491
|||||||||||||.|||||.||||||||.|||||.||.||.||.|||||||||||||||||||||||.||||||
Sbjct 2591 AGCCTCGAAAGCAGCAGCACGTGATCTCGACAGAGGAGGGGGATATGATGGAGACAAACAGCACTGACGATGAG 2664
Query 1492 AAGTCCACTGCCAAGAGTCTTCTGGTGAAGGCTGAGAAGCGCAAGTCTCCTCCCAAGGAGTATATTGATGAGGA 1565
||||||.|||||||||||||.|||||.|||||||||||||||||||||||||||||.|||||.|||||||||||
Sbjct 2665 AAGTCCGCTGCCAAGAGTCTCCTGGTAAAGGCTGAGAAGCGCAAGTCTCCTCCCAAAGAGTACATTGATGAGGA 2738
Query 1566 AGGTGTGAGATATGTCCCAGTGCGTCCAAGACCCCCCATTACTTTGCTTCGTCACTATCGGAACCCCTGGAAAG 1639
|||||||||.||||||||||||||.||.|||||.||||||||||||||.|||||||||||||||||||||||||
Sbjct 2739 AGGTGTGAGGTATGTCCCAGTGCGACCCAGACCTCCCATTACTTTGCTACGTCACTATCGGAACCCCTGGAAAG 2812
Query 1640 CTGCTTACCACCACTTTCAGAGGTACAGTGACGTCCGGGTCAAAGAGGAGAAGAAAGCTATGCTGCAGGAAATA 1713
|||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||
Sbjct 2813 CTGCTTATCACCACTTTCAGAGGTACAGTGACGTCCGGGTCAAAGAGGAGAAGAAAGCTATGCTACAGGAAATA 2886
Query 1714 GCTAATCAGAAAGGAGTATCCTGTCGTGCTCAAGGCTGGAAAGTCCACCTCTGTGCTGCCCAGTTACTACAGCT 1787
|||||||||||||||||.|||||.|||||.||.|||||||||||.|||||||||||||||||||||||||||||
Sbjct 2887 GCTAATCAGAAAGGAGTGTCCTGCCGTGCCCAGGGCTGGAAAGTTCACCTCTGTGCTGCCCAGTTACTACAGCT 2960
Query 1788 GACGAATCTAGAACATGATGTCTATGAAAGACTTACTAACCTGCAGGAAGGGATTATCCCAAAGAAAAAAGCAG 1861
|||.|||||||||||.||.||.|||||||||||.||.|||||.||||||||||||||||||||||||||.||||
Sbjct 2961 GACAAATCTAGAACACGACGTTTATGAAAGACTCACCAACCTACAGGAAGGGATTATCCCAAAGAAAAAGGCAG 3034
Query 1862 CAACAGATGATGATCTCCACCGAATAAACGAACTGATACAGGGAAATATGCAGAGGTGTAAACTTGTGATGGAT 1935
|.||.|||||.|||||.||.||||||||.||.||||||||||||||.||||||.||||||||||.||||||||.
Sbjct 3035 CGACTGATGACGATCTACATCGAATAAATGAGCTGATACAGGGAAACATGCAGCGGTGTAAACTAGTGATGGAC 3108
Query 1936 CAAATCAGTGAAGCCAGAGACTCCATGCTTAAGGTTTTAGATCATAAAGACCGTGTCCTGAAGCTGCTTAACAA 2009
|||||||||||.|||||||||||.||||||||||||.|.|||||.||.|||||.||.|||||||||||.|||||
Sbjct 3109 CAAATCAGTGAGGCCAGAGACTCTATGCTTAAGGTTCTGGATCACAAGGACCGGGTGCTGAAGCTGCTCAACAA 3182
Query 2010 GAACGGGACTGTCAAAAAAGTGTCCAAATTGAAGCGAAAGGAAAAAGTC 2058
|||||||||.|||||.||.|||||.||.||||||||.|||||.||.||.
Sbjct 3183 GAACGGGACGGTCAAGAAGGTGTCAAAGTTGAAGCGGAAGGAGAAGGTG 3231
