Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12570
- Subject:
- XM_006525953.1
- Aligned Length:
- 3126
- Identities:
- 1814
- Gaps:
- 1068
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAGGCCTTTACGGAAAAGCGTTTGAGGATTCCACAAGCATCGGGTCTTAATGTGGAAATGAGTTCCCAGCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTTTCCTCGGTTAGGAACCCCTTCCCCTGGGCTTAGCCAGCCACCTTCACAGATTGCAAGCAGTGGTTCCGCAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GACTGATAAACCAAGTTGCCACAGTTAATGATGAGGCTGGCCGAGATGCTGATGTTGGTACCAGGGAGCACGTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGCCCTAGCAGCTCCCTGCCGCCCCGGGAAGAGAAGCAGGAGCCAGTTGTGGTAAGGCCCTATCCACAGGTACA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GATGCTGCCTGCACACCATGCTGTCGCCTCAGCCACCCCTGTCGCAGTGACAGCCCCGCCAGCACACCTGACAC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CAGCAGTACCACTCTCTTTTTCGGAAGGACTTATGAAGCCGCCCCCGAAGCCTACCATGCCTAGCCGTCCCATT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCGCCTGCTCCCCCTTCTACCATGTCACTTCCCCCGAAAGTTCCCGGGCAGGTTACTGTTACCATGGAGAGCAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CATCCCTCAAGCTTCAGCCATTCCCGTGGCAACAATCAGTGGACAACAGGGGCATCCCAGTAACCTGCATCACA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTATGACCACAAATGTGCAGATGTCCATAATCCGCAGCAACGCTCCCGGGCCCCCACTTCACATTGGAGCTTCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CACTTACCTCGAGGTGCAGCTGCTGCCGCTGTGATGTCCAGCTCTAAAGTAACTACAGTCCTGAGGCCAACTTC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACAGCTGCCAAATGCTGCTACGGCGCAGCCAGCAGTACAGCACCTCATTCACCAGCCAATCCAGTCTCGGCCAC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTGTGACCACCTCCAGTACAATCCCTCCTGCTGTAGTAGCAACAGTCTCAGCCACCAGAGCGCAGTCTCCTGTC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATCACTACGACAGCGGCCCACGCGGCTGACTCGACGCTCAGTCGGCCCACTTTATCTATCCAGCATCCACCATC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGCAGCCATTAGTATCCAGCGTCCTGCACAGTCTCGAGATGTGACAACAAGAATCACACTACCTTCTCATCCTG 1036
Query 1 --------------------------------ATGGCTCAGAAAACAATCTTCAGTACTGGCACGCCAGTGGCT 42
||||||||||||||.|||||.|||||||||||.|||||||||
Sbjct 1037 CGTTAGGGACTCCGAAACAGCAGCTCCATACAATGGCTCAGAAAACCATCTTTAGTACTGGCACACCAGTGGCT 1110
Query 43 GCAGCCACAGTAGCACCTATTTTGGCAACCAACACCATTCCTTCAGCGACCACAGCTGGATCTGTGTCACACAC 116
|||||.|||||||||||||||.|||||||||||||..||||||||.|.||||||||||||||||||||.|||||
Sbjct 1111 GCAGCTACAGTAGCACCTATTCTGGCAACCAACACGCTTCCTTCAACAACCACAGCTGGATCTGTGTCGCACAC 1184
Query 117 GCAAGCTCCCACAAGTACCATTGTTACCATGACAGTACCCTCCCATTCCTCCCATGCTACTGCTGTGACCACCT 190
.|||||||||||||||||.|||||||||||||||.|.|||||||||||.|||||||||||||||||||||||.|
Sbjct 1185 ACAAGCTCCCACAAGTACAATTGTTACCATGACAATGCCCTCCCATTCATCCCATGCTACTGCTGTGACCACTT 1258
Query 191 CAAACATCCCAGTCGCCAAGGTGGTGCCCCAGCAGATCACGCACACTTCTCCTCGGATCCAGCCAGACTACCCT 264
||||.||||||||.||.|||||||||||||||||||||||.||||||||.||||||||||||||.||.||||||
Sbjct 1259 CAAATATCCCAGTTGCTAAGGTGGTGCCCCAGCAGATCACACACACTTCCCCTCGGATCCAGCCTGATTACCCT 1332
Query 265 GCCGAGAGGAGTAGCCTGATTCCCATCTCCGGACATCGGGCCTCTCCCAATCCTGTGGCCATGGAAACCCGAAG 338
.|.|||||||||||||||||||||||.|||||.||||||||||||||.|||||.|||||||||||||||||||.
Sbjct 1333 CCAGAGAGGAGTAGCCTGATTCCCATTTCCGGCCATCGGGCCTCTCCAAATCCAGTGGCCATGGAAACCCGAAA 1406
Query 339 TGACAACAGACCGTCTGTTCCCGTTCAGTTCCAATATTTTTTGCCAACTTACCCCCCTTCTGCATACCCACTGG 412
||||||||||||.||.|||||.|||||||||||.||.||.||||||||||||||.||.|||||.|||||.||||
Sbjct 1407 TGACAACAGACCTTCCGTTCCTGTTCAGTTCCAGTACTTCTTGCCAACTTACCCACCCTCTGCCTACCCGCTGG 1480
Query 413 CGGCACATACCTACACCCCAATCACCAGTTCCGTGTCCACTATCCGACAGTATCCAGTTTCAGCTCAGGCTCCA 486
|.|||||.|||||||||||.||||||||.||.||||||||||||||.|||||.||||||||.|||||.||.|||
Sbjct 1481 CTGCACACACCTACACCCCCATCACCAGCTCTGTGTCCACTATCCGGCAGTACCCAGTTTCTGCTCAAGCCCCA 1554
Query 487 AACTCTGCCATCACAGCTCAGACTGGTGTTGGGGTAGCGTCTACCGTCCACCTAAACCCCATGCAGTTGATGAC 560
|||||..|||||||||||||.|||||||||||.|||||.|||||.||||||||.||||||||||||.|||||||
Sbjct 1555 AACTCCACCATCACAGCTCAAACTGGTGTTGGTGTAGCATCTACAGTCCACCTGAACCCCATGCAGCTGATGAC 1628
Query 561 AGTGGATGCATCGCATGCTCGACATATTCAAGGGATCCAGCCAGCACCCATCAGTACCCAGGGTATCCAGCCGG 634
|||||||||.||.|||||.||||||||.||.||||||||||||||||||||||||||.|||||.||||||||.|
Sbjct 1629 AGTGGATGCCTCACATGCCCGACATATCCAGGGGATCCAGCCAGCACCCATCAGTACACAGGGAATCCAGCCAG 1702
Query 635 CCCCCATTGGGACCCCAGGGATACAGCCTGCACCACTTGGCACACAGGGAATTCACTCAGCAACCCCAATCAAC 708
|||||||||||||..|||||||.|||||.||||||.|||||||.|..|||||.||.||||||.|||||||||||
Sbjct 1703 CCCCCATTGGGACATCAGGGATCCAGCCAGCACCAATTGGCACCCCAGGAATCCATTCAGCAGCCCCAATCAAC 1776
Query 709 ACACAAGGGCTTCAGCCTGCACCTATGGGTACTCAGCAGCCTCAGCCTGAAGGAAAGACTTCAGCAGTGGTGTT 782
||.||.|||||||||||.|||.|.||||.||.|||||||||.||||||||.||.||.||.||||||||||||||
Sbjct 1777 ACTCAGGGGCTTCAGCCAGCAGCAATGGCTAATCAGCAGCCACAGCCTGAGGGGAAAACCTCAGCAGTGGTGTT 1850
Query 783 GGCAGATGGAGCCACAATTGTGGCCAACCCTATTAGCAATCCATTCAGTGCTGCTCCAGCAGCAACAACCGTGG 856
||||||||||||.||||||||.|||||||||||||||||.||||||||||||||||||||.|||||.||.||||
Sbjct 1851 GGCAGATGGAGCTACAATTGTAGCCAACCCTATTAGCAACCCATTCAGTGCTGCTCCAGCGGCAACCACAGTGG 1924
Query 857 TGCAGACCCACAGCCAGAGTGCTAGCACCAACGCTCCCGCCCAGGGCTCATCGCCACGGCCAAGCATACTCCGG 930
|.|||||.|||||.||||||||||||||||||.|.||.|||||||||||.||.||.|||||.||||||||.|||
Sbjct 1925 TCCAGACACACAGTCAGAGTGCTAGCACCAACACACCAGCCCAGGGCTCTTCTCCCCGGCCCAGCATACTGCGG 1998
Query 931 AAGAAACCTGCCACAGATGGTGCCAAACCCAAGTCTGAAATCCACGTGTCTATGGCCACTCCGGTCACTGTGTC 1004
|||||||||||||||||||||||||||||.||.||.|||.|.||.||||||||.||||||||.||.||.|||||
Sbjct 1999 AAGAAACCTGCCACAGATGGTGCCAAACCTAAATCCGAAGTGCATGTGTCTATAGCCACTCCAGTTACAGTGTC 2072
Query 1005 CATGGAGACTGTATCCAATCAAAATAATGATCAGCCTACCATTGCCGTCCCTCCAACTGCCCAGCAGCCCCCAC 1078
|.|||||||..||||||||||||||...||.|||||||||.||||.||||||||.||||||||||||||.||||
Sbjct 2073 CTTGGAGACCATATCCAATCAAAATGCCGAACAGCCTACCGTTGCTGTCCCTCCGACTGCCCAGCAGCCTCCAC 2146
Query 1079 CGACCATTCCAACTATGATTGCAGCAGCCAGTCCCCCGTCACAACCAGCCGTTGCCCTTTCAACCATTCCTGGA 1152
||||||||||.|..||||||||.|||||||||||.||.||.|||||||||.||||||||||.||||||||.|||
Sbjct 2147 CGACCATTCCCAGCATGATTGCGGCAGCCAGTCCTCCATCCCAACCAGCCATTGCCCTTTCCACCATTCCCGGA 2220
Query 1153 GCGGTCCCCATCACTCCACCCATCACCACCATTGCAGCTGCACCACCTCCATCAGTCACTGTGGGTGGCAGTCT 1226
||.||.||..|||||||||||||||||||||||||.||..|||||.|.|..||||.|.|.|||||.||||.||.
Sbjct 2221 GCCGTGCCTGTCACTCCACCCATCACCACCATTGCTGCCACACCAACGCTGTCAGCCCCAGTGGGCGGCACTCC 2294
Query 1227 TTCCTCCGTCTTGGGCCCTCCCGTTCCTGAAATTAAAGTGAAAGAAGAAGTAGAACCAATGGATATCATGAGGC 1300
||||.|.|||.||||.|||||.||||||||.||.||||||||.|||||||..||.|||.||||.||||..||||
Sbjct 2295 TTCCACGGTCCTGGGGCCTCCTGTTCCTGAGATCAAAGTGAAGGAAGAAGCGGAGCCAGTGGACATCACCAGGC 2368
Query 1301 CAGTTTCTGCAGTTCCTCCACTGGCTACCAACACTGTGTCTCCATCTCTTGCATTGCTGGCAAACAACTTGTCC 1374
|.||.||..||||.|||||.|||||.||||||||.|||||||||||||||||.||||||||||.||||.|||||
Sbjct 2369 CTGTCTCCACAGTCCCTCCTCTGGCCACCAACACGGTGTCTCCATCTCTTGCTTTGCTGGCAAGCAACCTGTCC 2442
Query 1375 ATGCCTACAAGTGACCTACCACCTGGTGCCTCCCCAAGGAAAAAGCCTCGAAAGCAACAGCATGTGATCTCAAC 1448
||||||.||||||||||.||||||||||||||||||||||||||||||||||||||.|||||.||||||||.||
Sbjct 2443 ATGCCTCCAAGTGACCTCCCACCTGGTGCCTCCCCAAGGAAAAAGCCTCGAAAGCAGCAGCACGTGATCTCGAC 2516
Query 1449 AGAAGAAGGTGACATGATGGAGACAAACAGCACTGATGATGAGAAGTCCACTGCCAAGAGTCTTCTGGTGAAGG 1522
|||.||.||.||.|||||||||||||||||||||||.||||||||||||.|||||||||||||.|||||.||||
Sbjct 2517 AGAGGAGGGGGATATGATGGAGACAAACAGCACTGACGATGAGAAGTCCGCTGCCAAGAGTCTCCTGGTAAAGG 2590
Query 1523 CTGAGAAGCGCAAGTCTCCTCCCAAGGAGTATATTGATGAGGAAGGTGTGAGATATGTCCCAGTGCGTCCAAGA 1596
|||||||||||||||||||||||||.|||||.||||||||||||||||||||.||||||||||||||.||.|||
Sbjct 2591 CTGAGAAGCGCAAGTCTCCTCCCAAAGAGTACATTGATGAGGAAGGTGTGAGGTATGTCCCAGTGCGACCCAGA 2664
Query 1597 CCCCCCATTACTTTGCTTCGTCACTATCGGAACCCCTGGAAAGCTGCTTACCACCACTTTCAGAGGTACAGTGA 1670
||.||||||||||||||.||||||||||||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct 2665 CCTCCCATTACTTTGCTACGTCACTATCGGAACCCCTGGAAAGCTGCTTATCACCACTTTCAGAGGTACAGTGA 2738
Query 1671 CGTCCGGGTCAAAGAGGAGAAGAAAGCTATGCTGCAGGAAATAGCTAATCAGAAAGGAGTATCCTGTCGTGCTC 1744
|||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||.|||||.|||||.|
Sbjct 2739 CGTCCGGGTCAAAGAGGAGAAGAAAGCTATGCTACAGGAAATAGCTAATCAGAAAGGAGTGTCCTGCCGTGCCC 2812
Query 1745 AAGGCTGGAAAGTCCACCTCTGTGCTGCCCAGTTACTACAGCTGACGAATCTAGAACATGATGTCTATGAAAGA 1818
|.|||||||||||.||||||||||||||||||||||||||||||||.|||||||||||.||.||.|||||||||
Sbjct 2813 AGGGCTGGAAAGTTCACCTCTGTGCTGCCCAGTTACTACAGCTGACAAATCTAGAACACGACGTTTATGAAAGA 2886
Query 1819 CTTACTAACCTGCAGGAAGGGATTATCCCAAAGAAAAAAGCAGCAACAGATGATGATCTCCACCGAATAAACGA 1892
||.||.|||||.||||||||||||||||||||||||||.|||||.||.|||||.|||||.||.||||||||.||
Sbjct 2887 CTCACCAACCTACAGGAAGGGATTATCCCAAAGAAAAAGGCAGCGACTGATGACGATCTACATCGAATAAATGA 2960
Query 1893 ACTGATACAGGGAAATATGCAGAGGTGTAAACTTGTGATGGATCAAATCAGTGAAGCCAGAGACTCCATGCTTA 1966
.||||||||||||||.||||||.||||||||||.||||||||.|||||||||||.|||||||||||.|||||||
Sbjct 2961 GCTGATACAGGGAAACATGCAGCGGTGTAAACTAGTGATGGACCAAATCAGTGAGGCCAGAGACTCTATGCTTA 3034
Query 1967 AGGTTTTAGATCATAAAGACCGTGTCCTGAAGCTGCTTAACAAGAACGGGACTGTCAAAAAAGTGTCCAAATTG 2040
|||||.|.|||||.||.|||||.||.|||||||||||.||||||||||||||.|||||.||.|||||.||.|||
Sbjct 3035 AGGTTCTGGATCACAAGGACCGGGTGCTGAAGCTGCTCAACAAGAACGGGACGGTCAAGAAGGTGTCAAAGTTG 3108
Query 2041 AAGCGAAAGGAAAAAGTC 2058
|||||.|||||.||.||.
Sbjct 3109 AAGCGGAAGGAGAAGGTG 3126
