Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12570
- Subject:
- XM_017317912.1
- Aligned Length:
- 3108
- Identities:
- 1814
- Gaps:
- 1050
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAATAAACATCTAGGAAACACACAGAGGAAACCCATGGAAAACCAAATTAATGATGAGGCTGGCCGAGATGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGATGTTGGTACCAGGGAGCACGTGGGCCCTAGCAGCTCCCTGCCGCCCCGGGAAGAGAAGCAGGAGCCAGTTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGGTAAGGCCCTATCCACAGGTACAGATGCTGCCTGCACACCATGCTGTCGCCTCAGCCACCCCTGTCGCAGTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACAGCCCCGCCAGCACACCTGACACCAGCAGTACCACTCTCTTTTTCGGAAGGACTTATGAAGCCGCCCCCGAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCCTACCATGCCTAGCCGTCCCATTGCGCCTGCTCCCCCTTCTACCATGTCACTTCCCCCGAAAGTTCCCGGGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGGTTACTGTTACCATGGAGAGCAGCATCCCTCAAGCTTCAGCCATTCCCGTGGCAACAATCAGTGGACAACAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGGCATCCCAGTAACCTGCATCACATTATGACCACAAATGTGCAGATGTCCATAATCCGCAGCAACGCTCCCGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCCCCCACTTCACATTGGAGCTTCCCACTTACCTCGAGGTGCAGCTGCTGCCGCTGTGATGTCCAGCTCTAAAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TAACTACAGTCCTGAGGCCAACTTCACAGCTGCCAAATGCTGCTACGGCGCAGCCAGCAGTACAGCACCTCATT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CACCAGCCAATCCAGTCTCGGCCACCTGTGACCACCTCCAGTACAATCCCTCCTGCTGTAGTAGCAACAGTCTC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGCCACCAGAGCGCAGTCTCCTGTCATCACTACGACAGCGGCCCACGCGGCTGACTCGACGCTCAGTCGGCCCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTTTATCTATCCAGCATCCACCATCTGCAGCCATTAGTATCCAGCGTCCTGCACAGTCTCGAGATGTGACAACA 888
Query 1 ---------------------------------------------------------ATGGCTCAGAAAACAAT 17
||||||||||||||.||
Sbjct 889 AGAATCACACTACCTTCTCATCCTGCGTTAGGGACTCCGAAACAGCAGCTCCATACAATGGCTCAGAAAACCAT 962
Query 18 CTTCAGTACTGGCACGCCAGTGGCTGCAGCCACAGTAGCACCTATTTTGGCAACCAACACCATTCCTTCAGCGA 91
|||.|||||||||||.||||||||||||||.|||||||||||||||.|||||||||||||..||||||||.|.|
Sbjct 963 CTTTAGTACTGGCACACCAGTGGCTGCAGCTACAGTAGCACCTATTCTGGCAACCAACACGCTTCCTTCAACAA 1036
Query 92 CCACAGCTGGATCTGTGTCACACACGCAAGCTCCCACAAGTACCATTGTTACCATGACAGTACCCTCCCATTCC 165
|||||||||||||||||||.|||||.|||||||||||||||||.|||||||||||||||.|.|||||||||||.
Sbjct 1037 CCACAGCTGGATCTGTGTCGCACACACAAGCTCCCACAAGTACAATTGTTACCATGACAATGCCCTCCCATTCA 1110
Query 166 TCCCATGCTACTGCTGTGACCACCTCAAACATCCCAGTCGCCAAGGTGGTGCCCCAGCAGATCACGCACACTTC 239
|||||||||||||||||||||||.|||||.||||||||.||.|||||||||||||||||||||||.||||||||
Sbjct 1111 TCCCATGCTACTGCTGTGACCACTTCAAATATCCCAGTTGCTAAGGTGGTGCCCCAGCAGATCACACACACTTC 1184
Query 240 TCCTCGGATCCAGCCAGACTACCCTGCCGAGAGGAGTAGCCTGATTCCCATCTCCGGACATCGGGCCTCTCCCA 313
.||||||||||||||.||.||||||.|.|||||||||||||||||||||||.|||||.||||||||||||||.|
Sbjct 1185 CCCTCGGATCCAGCCTGATTACCCTCCAGAGAGGAGTAGCCTGATTCCCATTTCCGGCCATCGGGCCTCTCCAA 1258
Query 314 ATCCTGTGGCCATGGAAACCCGAAGTGACAACAGACCGTCTGTTCCCGTTCAGTTCCAATATTTTTTGCCAACT 387
||||.|||||||||||||||||||.||||||||||||.||.|||||.|||||||||||.||.||.|||||||||
Sbjct 1259 ATCCAGTGGCCATGGAAACCCGAAATGACAACAGACCTTCCGTTCCTGTTCAGTTCCAGTACTTCTTGCCAACT 1332
Query 388 TACCCCCCTTCTGCATACCCACTGGCGGCACATACCTACACCCCAATCACCAGTTCCGTGTCCACTATCCGACA 461
|||||.||.|||||.|||||.|||||.|||||.|||||||||||.||||||||.||.||||||||||||||.||
Sbjct 1333 TACCCACCCTCTGCCTACCCGCTGGCTGCACACACCTACACCCCCATCACCAGCTCTGTGTCCACTATCCGGCA 1406
Query 462 GTATCCAGTTTCAGCTCAGGCTCCAAACTCTGCCATCACAGCTCAGACTGGTGTTGGGGTAGCGTCTACCGTCC 535
|||.||||||||.|||||.||.||||||||..|||||||||||||.|||||||||||.|||||.|||||.||||
Sbjct 1407 GTACCCAGTTTCTGCTCAAGCCCCAAACTCCACCATCACAGCTCAAACTGGTGTTGGTGTAGCATCTACAGTCC 1480
Query 536 ACCTAAACCCCATGCAGTTGATGACAGTGGATGCATCGCATGCTCGACATATTCAAGGGATCCAGCCAGCACCC 609
||||.||||||||||||.||||||||||||||||.||.|||||.||||||||.||.||||||||||||||||||
Sbjct 1481 ACCTGAACCCCATGCAGCTGATGACAGTGGATGCCTCACATGCCCGACATATCCAGGGGATCCAGCCAGCACCC 1554
Query 610 ATCAGTACCCAGGGTATCCAGCCGGCCCCCATTGGGACCCCAGGGATACAGCCTGCACCACTTGGCACACAGGG 683
||||||||.|||||.||||||||.||||||||||||||..|||||||.|||||.||||||.|||||||.|..||
Sbjct 1555 ATCAGTACACAGGGAATCCAGCCAGCCCCCATTGGGACATCAGGGATCCAGCCAGCACCAATTGGCACCCCAGG 1628
Query 684 AATTCACTCAGCAACCCCAATCAACACACAAGGGCTTCAGCCTGCACCTATGGGTACTCAGCAGCCTCAGCCTG 757
|||.||.||||||.|||||||||||||.||.|||||||||||.|||.|.||||.||.|||||||||.|||||||
Sbjct 1629 AATCCATTCAGCAGCCCCAATCAACACTCAGGGGCTTCAGCCAGCAGCAATGGCTAATCAGCAGCCACAGCCTG 1702
Query 758 AAGGAAAGACTTCAGCAGTGGTGTTGGCAGATGGAGCCACAATTGTGGCCAACCCTATTAGCAATCCATTCAGT 831
|.||.||.||.||||||||||||||||||||||||||.||||||||.|||||||||||||||||.|||||||||
Sbjct 1703 AGGGGAAAACCTCAGCAGTGGTGTTGGCAGATGGAGCTACAATTGTAGCCAACCCTATTAGCAACCCATTCAGT 1776
Query 832 GCTGCTCCAGCAGCAACAACCGTGGTGCAGACCCACAGCCAGAGTGCTAGCACCAACGCTCCCGCCCAGGGCTC 905
|||||||||||.|||||.||.|||||.|||||.|||||.||||||||||||||||||.|.||.|||||||||||
Sbjct 1777 GCTGCTCCAGCGGCAACCACAGTGGTCCAGACACACAGTCAGAGTGCTAGCACCAACACACCAGCCCAGGGCTC 1850
Query 906 ATCGCCACGGCCAAGCATACTCCGGAAGAAACCTGCCACAGAT------------------------------- 948
.||.||.|||||.||||||||.|||||||||||||||||||||
Sbjct 1851 TTCTCCCCGGCCCAGCATACTGCGGAAGAAACCTGCCACAGATGGGATGGCAGTCCGGAAAACTCTCCTCCCTC 1924
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1925 CTCAGCCTCCTGACGTGGCTACTCCTCGAGTAGAAAGCTCTATGCGGAGTGCTTCTGGGTCACCTAGACCTGCA 1998
Query 949 GGTGCCAAACCCAAGTCTGAAATCCACGTGTCTATGGCCACTCCGGTCACTGTGTCCATGGAGACTGTATCCAA 1022
|||||||||||.||.||.|||.|.||.||||||||.||||||||.||.||.||||||.|||||||..|||||||
Sbjct 1999 GGTGCCAAACCTAAATCCGAAGTGCATGTGTCTATAGCCACTCCAGTTACAGTGTCCTTGGAGACCATATCCAA 2072
Query 1023 TCAAAATAATGATCAGCCTACCATTGCCGTCCCTCCAACTGCCCAGCAGCCCCCACCGACCATTCCAACTATGA 1096
|||||||...||.|||||||||.||||.||||||||.||||||||||||||.||||||||||||||.|..||||
Sbjct 2073 TCAAAATGCCGAACAGCCTACCGTTGCTGTCCCTCCGACTGCCCAGCAGCCTCCACCGACCATTCCCAGCATGA 2146
Query 1097 TTGCAGCAGCCAGTCCCCCGTCACAACCAGCCGTTGCCCTTTCAACCATTCCTGGAGCGGTCCCCATCACTCCA 1170
||||.|||||||||||.||.||.|||||||||.||||||||||.||||||||.|||||.||.||..||||||||
Sbjct 2147 TTGCGGCAGCCAGTCCTCCATCCCAACCAGCCATTGCCCTTTCCACCATTCCCGGAGCCGTGCCTGTCACTCCA 2220
Query 1171 CCCATCACCACCATTGCAGCTGCACCACCTCCATCAGTCACTGTGGGTGGCAGTCTTTCCTCCGTCTTGGGCCC 1244
|||||||||||||||||.||..|||||.|.|..||||.|.|.|||||.||||.||.||||.|.|||.||||.||
Sbjct 2221 CCCATCACCACCATTGCTGCCACACCAACGCTGTCAGCCCCAGTGGGCGGCACTCCTTCCACGGTCCTGGGGCC 2294
Query 1245 TCCCGTTCCTGAAATTAAAGTGAAAGAAGAAGTAGAACCAATGGATATCATGAGGCCAGTTTCTGCAGTTCCTC 1318
|||.||||||||.||.||||||||.|||||||..||.|||.||||.||||..|||||.||.||..||||.||||
Sbjct 2295 TCCTGTTCCTGAGATCAAAGTGAAGGAAGAAGCGGAGCCAGTGGACATCACCAGGCCTGTCTCCACAGTCCCTC 2368
Query 1319 CACTGGCTACCAACACTGTGTCTCCATCTCTTGCATTGCTGGCAAACAACTTGTCCATGCCTACAAGTGACCTA 1392
|.|||||.||||||||.|||||||||||||||||.||||||||||.||||.|||||||||||.||||||||||.
Sbjct 2369 CTCTGGCCACCAACACGGTGTCTCCATCTCTTGCTTTGCTGGCAAGCAACCTGTCCATGCCTCCAAGTGACCTC 2442
Query 1393 CCACCTGGTGCCTCCCCAAGGAAAAAGCCTCGAAAGCAACAGCATGTGATCTCAACAGAAGAAGGTGACATGAT 1466
||||||||||||||||||||||||||||||||||||||.|||||.||||||||.|||||.||.||.||.|||||
Sbjct 2443 CCACCTGGTGCCTCCCCAAGGAAAAAGCCTCGAAAGCAGCAGCACGTGATCTCGACAGAGGAGGGGGATATGAT 2516
Query 1467 GGAGACAAACAGCACTGATGATGAGAAGTCCACTGCCAAGAGTCTTCTGGTGAAGGCTGAGAAGCGCAAGTCTC 1540
||||||||||||||||||.||||||||||||.|||||||||||||.|||||.||||||||||||||||||||||
Sbjct 2517 GGAGACAAACAGCACTGACGATGAGAAGTCCGCTGCCAAGAGTCTCCTGGTAAAGGCTGAGAAGCGCAAGTCTC 2590
Query 1541 CTCCCAAGGAGTATATTGATGAGGAAGGTGTGAGATATGTCCCAGTGCGTCCAAGACCCCCCATTACTTTGCTT 1614
|||||||.|||||.||||||||||||||||||||.||||||||||||||.||.|||||.||||||||||||||.
Sbjct 2591 CTCCCAAAGAGTACATTGATGAGGAAGGTGTGAGGTATGTCCCAGTGCGACCCAGACCTCCCATTACTTTGCTA 2664
Query 1615 CGTCACTATCGGAACCCCTGGAAAGCTGCTTACCACCACTTTCAGAGGTACAGTGACGTCCGGGTCAAAGAGGA 1688
||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 CGTCACTATCGGAACCCCTGGAAAGCTGCTTATCACCACTTTCAGAGGTACAGTGACGTCCGGGTCAAAGAGGA 2738
Query 1689 GAAGAAAGCTATGCTGCAGGAAATAGCTAATCAGAAAGGAGTATCCTGTCGTGCTCAAGGCTGGAAAGTCCACC 1762
|||||||||||||||.||||||||||||||||||||||||||.|||||.|||||.||.|||||||||||.||||
Sbjct 2739 GAAGAAAGCTATGCTACAGGAAATAGCTAATCAGAAAGGAGTGTCCTGCCGTGCCCAGGGCTGGAAAGTTCACC 2812
Query 1763 TCTGTGCTGCCCAGTTACTACAGCTGACGAATCTAGAACATGATGTCTATGAAAGACTTACTAACCTGCAGGAA 1836
||||||||||||||||||||||||||||.|||||||||||.||.||.|||||||||||.||.|||||.||||||
Sbjct 2813 TCTGTGCTGCCCAGTTACTACAGCTGACAAATCTAGAACACGACGTTTATGAAAGACTCACCAACCTACAGGAA 2886
Query 1837 GGGATTATCCCAAAGAAAAAAGCAGCAACAGATGATGATCTCCACCGAATAAACGAACTGATACAGGGAAATAT 1910
||||||||||||||||||||.|||||.||.|||||.|||||.||.||||||||.||.||||||||||||||.||
Sbjct 2887 GGGATTATCCCAAAGAAAAAGGCAGCGACTGATGACGATCTACATCGAATAAATGAGCTGATACAGGGAAACAT 2960
Query 1911 GCAGAGGTGTAAACTTGTGATGGATCAAATCAGTGAAGCCAGAGACTCCATGCTTAAGGTTTTAGATCATAAAG 1984
||||.||||||||||.||||||||.|||||||||||.|||||||||||.||||||||||||.|.|||||.||.|
Sbjct 2961 GCAGCGGTGTAAACTAGTGATGGACCAAATCAGTGAGGCCAGAGACTCTATGCTTAAGGTTCTGGATCACAAGG 3034
Query 1985 ACCGTGTCCTGAAGCTGCTTAACAAGAACGGGACTGTCAAAAAAGTGTCCAAATTGAAGCGAAAGGAAAAAGTC 2058
||||.||.|||||||||||.||||||||||||||.|||||.||.|||||.||.||||||||.|||||.||.||.
Sbjct 3035 ACCGGGTGCTGAAGCTGCTCAACAAGAACGGGACGGTCAAGAAGGTGTCAAAGTTGAAGCGGAAGGAGAAGGTG 3108
