Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12570
Subject:
XM_017317912.1
Aligned Length:
3108
Identities:
1814
Gaps:
1050

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGAATAAACATCTAGGAAACACACAGAGGAAACCCATGGAAAACCAAATTAATGATGAGGCTGGCCGAGATGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGATGTTGGTACCAGGGAGCACGTGGGCCCTAGCAGCTCCCTGCCGCCCCGGGAAGAGAAGCAGGAGCCAGTTG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TGGTAAGGCCCTATCCACAGGTACAGATGCTGCCTGCACACCATGCTGTCGCCTCAGCCACCCCTGTCGCAGTG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ACAGCCCCGCCAGCACACCTGACACCAGCAGTACCACTCTCTTTTTCGGAAGGACTTATGAAGCCGCCCCCGAA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GCCTACCATGCCTAGCCGTCCCATTGCGCCTGCTCCCCCTTCTACCATGTCACTTCCCCCGAAAGTTCCCGGGC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AGGTTACTGTTACCATGGAGAGCAGCATCCCTCAAGCTTCAGCCATTCCCGTGGCAACAATCAGTGGACAACAG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GGGCATCCCAGTAACCTGCATCACATTATGACCACAAATGTGCAGATGTCCATAATCCGCAGCAACGCTCCCGG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GCCCCCACTTCACATTGGAGCTTCCCACTTACCTCGAGGTGCAGCTGCTGCCGCTGTGATGTCCAGCTCTAAAG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TAACTACAGTCCTGAGGCCAACTTCACAGCTGCCAAATGCTGCTACGGCGCAGCCAGCAGTACAGCACCTCATT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CACCAGCCAATCCAGTCTCGGCCACCTGTGACCACCTCCAGTACAATCCCTCCTGCTGTAGTAGCAACAGTCTC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  AGCCACCAGAGCGCAGTCTCCTGTCATCACTACGACAGCGGCCCACGCGGCTGACTCGACGCTCAGTCGGCCCA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CTTTATCTATCCAGCATCCACCATCTGCAGCCATTAGTATCCAGCGTCCTGCACAGTCTCGAGATGTGACAACA  888

Query    1  ---------------------------------------------------------ATGGCTCAGAAAACAAT  17
                                                                     ||||||||||||||.||
Sbjct  889  AGAATCACACTACCTTCTCATCCTGCGTTAGGGACTCCGAAACAGCAGCTCCATACAATGGCTCAGAAAACCAT  962

Query   18  CTTCAGTACTGGCACGCCAGTGGCTGCAGCCACAGTAGCACCTATTTTGGCAACCAACACCATTCCTTCAGCGA  91
            |||.|||||||||||.||||||||||||||.|||||||||||||||.|||||||||||||..||||||||.|.|
Sbjct  963  CTTTAGTACTGGCACACCAGTGGCTGCAGCTACAGTAGCACCTATTCTGGCAACCAACACGCTTCCTTCAACAA  1036

Query   92  CCACAGCTGGATCTGTGTCACACACGCAAGCTCCCACAAGTACCATTGTTACCATGACAGTACCCTCCCATTCC  165
            |||||||||||||||||||.|||||.|||||||||||||||||.|||||||||||||||.|.|||||||||||.
Sbjct 1037  CCACAGCTGGATCTGTGTCGCACACACAAGCTCCCACAAGTACAATTGTTACCATGACAATGCCCTCCCATTCA  1110

Query  166  TCCCATGCTACTGCTGTGACCACCTCAAACATCCCAGTCGCCAAGGTGGTGCCCCAGCAGATCACGCACACTTC  239
            |||||||||||||||||||||||.|||||.||||||||.||.|||||||||||||||||||||||.||||||||
Sbjct 1111  TCCCATGCTACTGCTGTGACCACTTCAAATATCCCAGTTGCTAAGGTGGTGCCCCAGCAGATCACACACACTTC  1184

Query  240  TCCTCGGATCCAGCCAGACTACCCTGCCGAGAGGAGTAGCCTGATTCCCATCTCCGGACATCGGGCCTCTCCCA  313
            .||||||||||||||.||.||||||.|.|||||||||||||||||||||||.|||||.||||||||||||||.|
Sbjct 1185  CCCTCGGATCCAGCCTGATTACCCTCCAGAGAGGAGTAGCCTGATTCCCATTTCCGGCCATCGGGCCTCTCCAA  1258

Query  314  ATCCTGTGGCCATGGAAACCCGAAGTGACAACAGACCGTCTGTTCCCGTTCAGTTCCAATATTTTTTGCCAACT  387
            ||||.|||||||||||||||||||.||||||||||||.||.|||||.|||||||||||.||.||.|||||||||
Sbjct 1259  ATCCAGTGGCCATGGAAACCCGAAATGACAACAGACCTTCCGTTCCTGTTCAGTTCCAGTACTTCTTGCCAACT  1332

Query  388  TACCCCCCTTCTGCATACCCACTGGCGGCACATACCTACACCCCAATCACCAGTTCCGTGTCCACTATCCGACA  461
            |||||.||.|||||.|||||.|||||.|||||.|||||||||||.||||||||.||.||||||||||||||.||
Sbjct 1333  TACCCACCCTCTGCCTACCCGCTGGCTGCACACACCTACACCCCCATCACCAGCTCTGTGTCCACTATCCGGCA  1406

Query  462  GTATCCAGTTTCAGCTCAGGCTCCAAACTCTGCCATCACAGCTCAGACTGGTGTTGGGGTAGCGTCTACCGTCC  535
            |||.||||||||.|||||.||.||||||||..|||||||||||||.|||||||||||.|||||.|||||.||||
Sbjct 1407  GTACCCAGTTTCTGCTCAAGCCCCAAACTCCACCATCACAGCTCAAACTGGTGTTGGTGTAGCATCTACAGTCC  1480

Query  536  ACCTAAACCCCATGCAGTTGATGACAGTGGATGCATCGCATGCTCGACATATTCAAGGGATCCAGCCAGCACCC  609
            ||||.||||||||||||.||||||||||||||||.||.|||||.||||||||.||.||||||||||||||||||
Sbjct 1481  ACCTGAACCCCATGCAGCTGATGACAGTGGATGCCTCACATGCCCGACATATCCAGGGGATCCAGCCAGCACCC  1554

Query  610  ATCAGTACCCAGGGTATCCAGCCGGCCCCCATTGGGACCCCAGGGATACAGCCTGCACCACTTGGCACACAGGG  683
            ||||||||.|||||.||||||||.||||||||||||||..|||||||.|||||.||||||.|||||||.|..||
Sbjct 1555  ATCAGTACACAGGGAATCCAGCCAGCCCCCATTGGGACATCAGGGATCCAGCCAGCACCAATTGGCACCCCAGG  1628

Query  684  AATTCACTCAGCAACCCCAATCAACACACAAGGGCTTCAGCCTGCACCTATGGGTACTCAGCAGCCTCAGCCTG  757
            |||.||.||||||.|||||||||||||.||.|||||||||||.|||.|.||||.||.|||||||||.|||||||
Sbjct 1629  AATCCATTCAGCAGCCCCAATCAACACTCAGGGGCTTCAGCCAGCAGCAATGGCTAATCAGCAGCCACAGCCTG  1702

Query  758  AAGGAAAGACTTCAGCAGTGGTGTTGGCAGATGGAGCCACAATTGTGGCCAACCCTATTAGCAATCCATTCAGT  831
            |.||.||.||.||||||||||||||||||||||||||.||||||||.|||||||||||||||||.|||||||||
Sbjct 1703  AGGGGAAAACCTCAGCAGTGGTGTTGGCAGATGGAGCTACAATTGTAGCCAACCCTATTAGCAACCCATTCAGT  1776

Query  832  GCTGCTCCAGCAGCAACAACCGTGGTGCAGACCCACAGCCAGAGTGCTAGCACCAACGCTCCCGCCCAGGGCTC  905
            |||||||||||.|||||.||.|||||.|||||.|||||.||||||||||||||||||.|.||.|||||||||||
Sbjct 1777  GCTGCTCCAGCGGCAACCACAGTGGTCCAGACACACAGTCAGAGTGCTAGCACCAACACACCAGCCCAGGGCTC  1850

Query  906  ATCGCCACGGCCAAGCATACTCCGGAAGAAACCTGCCACAGAT-------------------------------  948
            .||.||.|||||.||||||||.|||||||||||||||||||||                               
Sbjct 1851  TTCTCCCCGGCCCAGCATACTGCGGAAGAAACCTGCCACAGATGGGATGGCAGTCCGGAAAACTCTCCTCCCTC  1924

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1925  CTCAGCCTCCTGACGTGGCTACTCCTCGAGTAGAAAGCTCTATGCGGAGTGCTTCTGGGTCACCTAGACCTGCA  1998

Query  949  GGTGCCAAACCCAAGTCTGAAATCCACGTGTCTATGGCCACTCCGGTCACTGTGTCCATGGAGACTGTATCCAA  1022
            |||||||||||.||.||.|||.|.||.||||||||.||||||||.||.||.||||||.|||||||..|||||||
Sbjct 1999  GGTGCCAAACCTAAATCCGAAGTGCATGTGTCTATAGCCACTCCAGTTACAGTGTCCTTGGAGACCATATCCAA  2072

Query 1023  TCAAAATAATGATCAGCCTACCATTGCCGTCCCTCCAACTGCCCAGCAGCCCCCACCGACCATTCCAACTATGA  1096
            |||||||...||.|||||||||.||||.||||||||.||||||||||||||.||||||||||||||.|..||||
Sbjct 2073  TCAAAATGCCGAACAGCCTACCGTTGCTGTCCCTCCGACTGCCCAGCAGCCTCCACCGACCATTCCCAGCATGA  2146

Query 1097  TTGCAGCAGCCAGTCCCCCGTCACAACCAGCCGTTGCCCTTTCAACCATTCCTGGAGCGGTCCCCATCACTCCA  1170
            ||||.|||||||||||.||.||.|||||||||.||||||||||.||||||||.|||||.||.||..||||||||
Sbjct 2147  TTGCGGCAGCCAGTCCTCCATCCCAACCAGCCATTGCCCTTTCCACCATTCCCGGAGCCGTGCCTGTCACTCCA  2220

Query 1171  CCCATCACCACCATTGCAGCTGCACCACCTCCATCAGTCACTGTGGGTGGCAGTCTTTCCTCCGTCTTGGGCCC  1244
            |||||||||||||||||.||..|||||.|.|..||||.|.|.|||||.||||.||.||||.|.|||.||||.||
Sbjct 2221  CCCATCACCACCATTGCTGCCACACCAACGCTGTCAGCCCCAGTGGGCGGCACTCCTTCCACGGTCCTGGGGCC  2294

Query 1245  TCCCGTTCCTGAAATTAAAGTGAAAGAAGAAGTAGAACCAATGGATATCATGAGGCCAGTTTCTGCAGTTCCTC  1318
            |||.||||||||.||.||||||||.|||||||..||.|||.||||.||||..|||||.||.||..||||.||||
Sbjct 2295  TCCTGTTCCTGAGATCAAAGTGAAGGAAGAAGCGGAGCCAGTGGACATCACCAGGCCTGTCTCCACAGTCCCTC  2368

Query 1319  CACTGGCTACCAACACTGTGTCTCCATCTCTTGCATTGCTGGCAAACAACTTGTCCATGCCTACAAGTGACCTA  1392
            |.|||||.||||||||.|||||||||||||||||.||||||||||.||||.|||||||||||.||||||||||.
Sbjct 2369  CTCTGGCCACCAACACGGTGTCTCCATCTCTTGCTTTGCTGGCAAGCAACCTGTCCATGCCTCCAAGTGACCTC  2442

Query 1393  CCACCTGGTGCCTCCCCAAGGAAAAAGCCTCGAAAGCAACAGCATGTGATCTCAACAGAAGAAGGTGACATGAT  1466
            ||||||||||||||||||||||||||||||||||||||.|||||.||||||||.|||||.||.||.||.|||||
Sbjct 2443  CCACCTGGTGCCTCCCCAAGGAAAAAGCCTCGAAAGCAGCAGCACGTGATCTCGACAGAGGAGGGGGATATGAT  2516

Query 1467  GGAGACAAACAGCACTGATGATGAGAAGTCCACTGCCAAGAGTCTTCTGGTGAAGGCTGAGAAGCGCAAGTCTC  1540
            ||||||||||||||||||.||||||||||||.|||||||||||||.|||||.||||||||||||||||||||||
Sbjct 2517  GGAGACAAACAGCACTGACGATGAGAAGTCCGCTGCCAAGAGTCTCCTGGTAAAGGCTGAGAAGCGCAAGTCTC  2590

Query 1541  CTCCCAAGGAGTATATTGATGAGGAAGGTGTGAGATATGTCCCAGTGCGTCCAAGACCCCCCATTACTTTGCTT  1614
            |||||||.|||||.||||||||||||||||||||.||||||||||||||.||.|||||.||||||||||||||.
Sbjct 2591  CTCCCAAAGAGTACATTGATGAGGAAGGTGTGAGGTATGTCCCAGTGCGACCCAGACCTCCCATTACTTTGCTA  2664

Query 1615  CGTCACTATCGGAACCCCTGGAAAGCTGCTTACCACCACTTTCAGAGGTACAGTGACGTCCGGGTCAAAGAGGA  1688
            ||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||
Sbjct 2665  CGTCACTATCGGAACCCCTGGAAAGCTGCTTATCACCACTTTCAGAGGTACAGTGACGTCCGGGTCAAAGAGGA  2738

Query 1689  GAAGAAAGCTATGCTGCAGGAAATAGCTAATCAGAAAGGAGTATCCTGTCGTGCTCAAGGCTGGAAAGTCCACC  1762
            |||||||||||||||.||||||||||||||||||||||||||.|||||.|||||.||.|||||||||||.||||
Sbjct 2739  GAAGAAAGCTATGCTACAGGAAATAGCTAATCAGAAAGGAGTGTCCTGCCGTGCCCAGGGCTGGAAAGTTCACC  2812

Query 1763  TCTGTGCTGCCCAGTTACTACAGCTGACGAATCTAGAACATGATGTCTATGAAAGACTTACTAACCTGCAGGAA  1836
            ||||||||||||||||||||||||||||.|||||||||||.||.||.|||||||||||.||.|||||.||||||
Sbjct 2813  TCTGTGCTGCCCAGTTACTACAGCTGACAAATCTAGAACACGACGTTTATGAAAGACTCACCAACCTACAGGAA  2886

Query 1837  GGGATTATCCCAAAGAAAAAAGCAGCAACAGATGATGATCTCCACCGAATAAACGAACTGATACAGGGAAATAT  1910
            ||||||||||||||||||||.|||||.||.|||||.|||||.||.||||||||.||.||||||||||||||.||
Sbjct 2887  GGGATTATCCCAAAGAAAAAGGCAGCGACTGATGACGATCTACATCGAATAAATGAGCTGATACAGGGAAACAT  2960

Query 1911  GCAGAGGTGTAAACTTGTGATGGATCAAATCAGTGAAGCCAGAGACTCCATGCTTAAGGTTTTAGATCATAAAG  1984
            ||||.||||||||||.||||||||.|||||||||||.|||||||||||.||||||||||||.|.|||||.||.|
Sbjct 2961  GCAGCGGTGTAAACTAGTGATGGACCAAATCAGTGAGGCCAGAGACTCTATGCTTAAGGTTCTGGATCACAAGG  3034

Query 1985  ACCGTGTCCTGAAGCTGCTTAACAAGAACGGGACTGTCAAAAAAGTGTCCAAATTGAAGCGAAAGGAAAAAGTC  2058
            ||||.||.|||||||||||.||||||||||||||.|||||.||.|||||.||.||||||||.|||||.||.||.
Sbjct 3035  ACCGGGTGCTGAAGCTGCTCAACAAGAACGGGACGGTCAAGAAGGTGTCAAAGTTGAAGCGGAAGGAGAAGGTG  3108

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