Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12570
- Subject:
- XR_923026.3
- Aligned Length:
- 4332
- Identities:
- 1954
- Gaps:
- 2378
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGCTGCCCCGGCCAGGCTCGCGCCTGATTGGCTGGCAGTCGGCGGGAGGGTGGGGCGGGCTCTGAACGTGCAGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCGCTGTGGATTGGTCCTGGGCCTCCACTGACGCGTCGGGCGTGGGGCCAATGGGCGGGCGGGGGAGGCAGGGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAGGTTCGGGGGAAGAGGACTGCGAGCACAGCGGCGGCCGGGTGGCGGGGGTGAGTGGGGCCAGCGGGGCTGGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CAGCAGCGGGCCCCGGGCGCCGCCGCCGCGATCCCTCCCCGCGCCCGCCGAGCACATCGCCGCCGCCGAGATGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCCCTCCGCGGCACCCCCAGGCCGGCGAGATAGAAGCGGGCGGTGCGGGCGGCGGGCGGCGGCTACAGGTGGAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATGAGTTCTCAACAGTTTCCTCGGTTAGGAGCCCCTTCTACCGGGCTGAGCCAGGCCCCTTCTCAGATTGCAAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CAGTGGTTCTGCTGGATTGATAAACCCAGCTGCTACAGTCAATGATGAATCTGGTCGAGATTCTGAAGTCAGTG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCAGGGAGCACATGAGTTCCAGCAGCTCCCTCCAGTCCCGGGAGGAGAAGCAAGAGCCTGTTGTGGTAAGGCCC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TATCCACAGGTGCAGATGTTGTCGACACACCATGCTGTCGCATCAGCCACACCTGTTGCAGTGACAGCCCCGCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGCACACCTGACGCCAGCAGTGCCACTTTCATTTTCGGAGGGACTTATGAAGCCGCCCCCGAAGCCCACCATGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTAGCCGTCCCATTGCTCCTGCTCCACCTTCTACCCTGTCACTTCCCCCCAAGGTTCCAGGGCAGGTTACCGTT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ACCATGGAGAGTAGCATCCCTCAAGCTTCAGCCATTCCTGTGGCAACAATCAGTGGACAACAGGGCCATCCCAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TAACCTGCATCACATCATGACTACAAATGTGCAAATGTCTATCATCCGCAGCAATGCTCCTGGGCCCCCTCTTC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ACATTGGAGCTTCTCATTTACCTCGAGGTGCAGCTGCTGCTGCTGTGATGTCCAGTTCTAAAGTAACCACAGTC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTGAGGCCGACCTCACAGCTGCCAAATGCTGCTACTGCTCAGCCAGCAGTACAGCACATCATTCACCAACCAAT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCAGTCTCGGCCACCTGTGACCACCTCCAATGCCATCCCTCCTGCTGTGGTAGCAACTGTCTCAGCCACCAGAG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CTCAGTCTCCAGTCATCACTACGACAGCGGCGCATGCTACTGATTCAGCACTTAGTAGGCCAACCTTGTCTATC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CAGCATCCTCCATCTGCAGCAATCAGTATTCAGCGTCCTGCCCAGTCACGAGATGTCACAACAAGAATCACACT 1332
Query 1 ----------------------------------------------ATGGCTCAGAAAACAATCTTCAGTACTG 28
||||||||||||||||||||||||||||
Sbjct 1333 ACCATCTCACCCTGCATTAGGGACGCCAAAACAGCAGCTTCATACAATGGCTCAGAAAACAATCTTCAGTACTG 1406
Query 29 GCACGCCAGTGGCTGCAGCCACAGTAGCACCTATTTTGGCAACCAACACCATTCCTTCAGCGACCACAGCTGGA 102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GCACGCCAGTGGCTGCAGCCACAGTAGCACCTATTTTGGCAACCAACACCATTCCTTCAGCGACCACAGCTGGA 1480
Query 103 TCTGTGTCACACACGCAAGCTCCCACAAGTACCATTGTTACCATGACAGTACCCTCCCATTCCTCCCATGCTAC 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 TCTGTGTCACACACGCAAGCTCCCACAAGTACCATTGTTACCATGACAGTACCCTCCCATTCCTCCCATGCTAC 1554
Query 177 TGCTGTGACCACCTCAAACATCCCAGTCGCCAAGGTGGTGCCCCAGCAGATCACGCACACTTCTCCTCGGATCC 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 TGCTGTGACCACCTCAAACATCCCAGTCGCCAAGGTGGTGCCCCAGCAGATCACGCACACTTCTCCTCGGATCC 1628
Query 251 AGCCAGACTACCCTGCCGAGAGGAGTAGCCTGATTCCCATCTCCGGACATCGGGCCTCTCCCAATCCTGTGGCC 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 AGCCAGACTACCCTGCCGAGAGGAGTAGCCTGATTCCCATCTCCGGACATCGGGCCTCTCCCAATCCTGTGGCC 1702
Query 325 ATGGAAACCCGAAGTGACAACAGACCGTCTGTTCCCGTTCAGTTCCAATATTTTTTGCCAACTTACCCCCCTTC 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 ATGGAAACCCGAAGTGACAACAGACCGTCTGTTCCCGTTCAGTTCCAATATTTTTTGCCAACTTACCCCCCTTC 1776
Query 399 TGCATACCCACTGGCGGCACATACCTACACCCCAATCACCAGTTCCGTGTCCACTATCCGACAGTATCCAGTTT 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 TGCATACCCACTGGCGGCACATACCTACACCCCAATCACCAGTTCCGTGTCCACTATCCGACAGTATCCAGTTT 1850
Query 473 CAGCTCAGGCTCCAAACTCTGCCATCACAGCTCAGACTGGTGTTGGGGTAGCGTCTACCGTCCACCTAAACCCC 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 CAGCTCAGGCTCCAAACTCTGCCATCACAGCTCAGACTGGTGTTGGGGTAGCGTCTACCGTCCACCTAAACCCC 1924
Query 547 ATGCAGTTGATGACAGTGGATGCATCGCATGCTCGACATATTCAAGGGATCCAGCCAGCACCCATCAGTACCCA 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 ATGCAGTTGATGACAGTGGATGCATCGCATGCTCGACATATTCAAGGGATCCAGCCAGCACCCATCAGTACCCA 1998
Query 621 GGGTATCCAGCCGGCCCCCATTGGGACCCCAGGGATACAGCCTGCACCACTTGGCACACAGGGAATTCACTCAG 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 GGGTATCCAGCCGGCCCCCATTGGGACCCCAGGGATACAGCCTGCACCACTTGGCACACAGGGAATTCACTCAG 2072
Query 695 CAACCCCAATCAACACACAAGGGCTTCAGCCTGCACCTATGGGTACTCAGCAGCCTCAGCCTGAAGGAAAGACT 768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 CAACCCCAATCAACACACAAGGGCTTCAGCCTGCACCTATGGGTACTCAGCAGCCTCAGCCTGAAGGAAAGACT 2146
Query 769 TCAGCAGTGGTGTTGGCAGATGGAGCCACAATTGTGGCCAACCCTATTAGCAATCCATTCAGTGCTGCTCCAGC 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 TCAGCAGTGGTGTTGGCAGATGGAGCCACAATTGTGGCCAACCCTATTAGCAATCCATTCAGTGCTGCTCCAGC 2220
Query 843 AGCAACAACCGTGGTGCAGACCCACAGCCAGAGTGCTAGCACCAACGCTCCCGCCCAGGGCTCATCGCCACGGC 916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 AGCAACAACCGTGGTGCAGACCCACAGCCAGAGTGCTAGCACCAACGCTCCCGCCCAGGGCTCATCGCCACGGC 2294
Query 917 CAAGCATACTCCGGAAGAAACCTGCCACAGAT------------------------------------------ 948
||||||||||||||||||||||||||||||||
Sbjct 2295 CAAGCATACTCCGGAAGAAACCTGCCACAGATGGAATGGCAGTTCGGAAAACCCTCATTCCTCCTCAGCCTCCT 2368
Query 949 ---------------------------------------------------------------GGTGCCAAACC 959
|||||||||||
Sbjct 2369 GATGTTGCTAGTCCTCGAGTGGAAAGCTCTATGCGGAGTACGTCTGGGTCACCTAGGCCTGCAGGTGCCAAACC 2442
Query 960 CAAGTCTGAAATCCACGTGTCTATGGCCACTCCGGTCACTGTGTCCATGGAGACTGTATCCAATCAAAATAATG 1033
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 CAAGTCTGAAATCCACGTGTCTATGGCCACTCCGGTCACTGTGTCCATGGAGACTGTATCCAATCAAAATAATG 2516
Query 1034 ATCAGCCTACCATTGCCGTCCCTCCAACTGCCCAGCAGCCCCCACCGACCATTCCAACTATGATTGCAGCAGCC 1107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 ATCAGCCTACCATTGCCGTCCCTCCAACTGCCCAGCAGCCCCCACCGACCATTCCAACTATGATTGCAGCAGCC 2590
Query 1108 AGTCCCCCGTCACAACCAGCCGTTGCCCTTTCAACCATTCCTGGAGCGGTCCCCATCACTCCACCCATCACCAC 1181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 AGTCCCCCGTCACAACCAGCCGTTGCCCTTTCAACCATTCCTGGAGCGGTCCCCATCACTCCACCCATCACCAC 2664
Query 1182 CATTGCAGCTGCACCACCTCCATCAGTCACTGTGGGTGGCAGTCTTTCCTCCGTCTTGGGCCCTCCCGTTCCTG 1255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 CATTGCAGCTGCACCACCTCCATCAGTCACTGTGGGTGGCAGTCTTTCCTCCGTCTTGGGCCCTCCCGTTCCTG 2738
Query 1256 AAATTAAAGTGAAAGAAGAAGTAGAACCAATGGATATCATGAGGCCAGTTTCTGCAGTTCCTCCACTGGCTACC 1329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 AAATTAAAGTGAAAGAAGAAGTAGAACCAATGGATATCATGAGGCCAGTTTCTGCAGTTCCTCCACTGGCTACC 2812
Query 1330 AACACTGTGTCTCCATCTCTTGCATTGCTGGCAAACAACTTGTCCATGCCTACAAGTGACCTACCACCTGGTGC 1403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813 AACACTGTGTCTCCATCTCTTGCATTGCTGGCAAACAACTTGTCCATGCCTACAAGTGACCTACCACCTGGTGC 2886
Query 1404 CTCCCCAAGGAAAAAGCCTCGAAAGCAACAGCATGTGATCTCAACAGAAGAAGGTGACATGATGGAGACAAACA 1477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887 CTCCCCAAGGAAAAAGCCTCGAAAGCAACAGCATGTGATCTCAACAGAAGAAGGTGACATGATGGAGACAAACA 2960
Query 1478 GCACTGATGATGAGAAGTCCACTGCCAAGAGTCTTCTGGTGAAGGCTGAGAAGCGCAAGTCTCCTCCCAAGGAG 1551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961 GCACTGATGATGAGAAGTCCACTGCCAAGAGTCTTCTGGTGAAGGCTGAGAAGCGCAAGTCTCCTCCCAAGGAG 3034
Query 1552 TATATTGATGAGGAAGGTGTGAGATATGTCCCAGTGCGTCCAAGACCCCCCATTACTTTGCTTCGTCACTATCG 1625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3035 TATATTGATGAGGAAGGTGTGAGATATGTCCCAGTGCGTCCAAGACCCCCCATTACTTTGCTTCGTCACTATCG 3108
Query 1626 GAACCCCTGGAAAGCTGCTTACCACCACTTTCAGAGGTACAGTGACGTCCGGGTCAAAGAGGAGAAGAAAGCTA 1699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3109 GAACCCCTGGAAAGCTGCTTACCACCACTTTCAGAGGTACAGTGACGTCCGGGTCAAA---------------- 3166
Query 1700 TGCTGCAGGAAATAGCTAATCAGAAAGGAGTATCCTGTCGTGCTCAAGGCTGGAAAGTCCACCTCTGTGCTGCC 1773
Sbjct 3167 -------------------------------------------------------------------------- 3166
Query 1774 CAGTTACTACAGCTGACGAATCTAGAACATGATGTCTATGAAAGACTTACTAACCTGCAGGAAGGGATTATCCC 1847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3167 --------------GACGAATCTAGAACATGATGTCTATGAAAGACTTACTAACCTGCAGGAAGGGATTATCCC 3226
Query 1848 AAAGAAAAAAGCAGCAACAGATGATGATCTCCACCGAATAAACGAACTGATACAGGGAAATATGCAGAGGTGTA 1921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3227 AAAGAAAAAAGCAGCAACAGATGATGATCTCCACCGAATAAACGAACTGATACAGGGAAATATGCAGAGGTGTA 3300
Query 1922 AACTTGTGATGGATCAAATCAGTGAAGCCAGAGACTCCATGCTTAAGGTTTTAGATCATAAAGACCGTGTCCTG 1995
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3301 AACTTGTGATGGATCAAATCAGTGAAGCCAGAGACTCCATGCTTAAGGTTTTAGATCATAAAGACCGTGTCCTG 3374
Query 1996 AAGCTGCTTAACAAGAACGGGACTGTCAAAAAAGTGTCCAAATTGAAGCGAAAGGAAAAAGTC----------- 2058
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3375 AAGCTGCTTAACAAGAACGGGACTGTCAAAAAAGTGTCCAAATTGAAGCGAAAGGAAAAAGTCTAGACCCAGAA 3448
Query 2059 -------------------------------------------------------------------------- 2058
Sbjct 3449 CAATCAGGAGATTGGAAGCAAATTTATGAAGAATGATGGTGGGGGTGGGGGGAGGGTTTTGGTTTTTTCCAAAG 3522
Query 2059 -------------------------------------------------------------------------- 2058
Sbjct 3523 TGGAACATTGAAATAAAGGAAGTGTTCCTTAGTTCCCGTGTGAAAGCAGAGGAACCCATGACATCCAAGGGCGT 3596
Query 2059 -------------------------------------------------------------------------- 2058
Sbjct 3597 GAAAGGATCAGAGCTGACTGGACATAGTGAGCTGCCTTCTTGCGTTCGGGTGCACCCCTGTTAAACCTGATCTG 3670
Query 2059 -------------------------------------------------------------------------- 2058
Sbjct 3671 TGTCATAAGTGACTCCGGATGCATCAGTGTCCACCAGTTGGAAGCAATGACAAGGATGGCTGGCTGGTGTTTTT 3744
Query 2059 -------------------------------------------------------------------------- 2058
Sbjct 3745 CAGCCTTCCGGTTTATAGACTGTATTTATCTAGTGGATTCCTGCAGGCCCCATACTGAGCCTGGACTGAAAGTA 3818
Query 2059 -------------------------------------------------------------------------- 2058
Sbjct 3819 TCCACTCGGACCATCTGTTATCTCTCTACACTGAAAATAAAACCTCTTCCACCCACCCCATTCGGTTCTTCTGC 3892
Query 2059 -------------------------------------------------------------------------- 2058
Sbjct 3893 CTGACCTTCAAATGCCCATGTTGGCCTTTTACAGCAGTGCCACGGCACCAAGCGAGCTGCCACATCTCACACTC 3966
Query 2059 -------------------------------------------------------------------------- 2058
Sbjct 3967 TAAAGGGTTTGAACTATTAGTTCTTGTCATTTTTTAAAAAAAACCATTCCCAAGTGAAATTGTTATATCGTCTG 4040
Query 2059 -------------------------------------------------------------------------- 2058
Sbjct 4041 TCTTGCGTGTGTCAGAACTGGGTTTTTGTGGAGGTTCAGAGCAGGCAACACCATAAGTTGCTCTCAGATCCTTG 4114
Query 2059 -------------------------------------------------------------------------- 2058
Sbjct 4115 TTCTGAAGTACATTCTTGGTTATCTGTACTTCTGTAGCTGGTGTGATGCTGTTAATTGTATGTACCACACATCT 4188
Query 2059 ---------------------------------------- 2058
Sbjct 4189 CCAGACGTTAATAAAGGACTCAAAGAGGTTTTTGTACTTG 4228
