Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12606
- Subject:
- NR_110357.1
- Aligned Length:
- 1766
- Identities:
- 766
- Gaps:
- 919
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CAGGACAAGCGCAGAGCATCCCAGCCCTGGCTCCAGACTACAGCTCCCGGCATGCCCTGCACCTGGTACTCGCC 74
Query 1 -----------------------------------------ATGAGGATGGAGGCCGGGGAGGCAGCGCCGCCG 33
|||||||||||||||||||||||||||||.|||
Sbjct 75 CGCGGCGTGCGGAGGGAAGGATGCAGACAACGCGGCCGGCGATGAGGATGGAGGCCGGGGAGGCAGCGCCACCG 148
Query 34 GCGGGGGCGGGCGGCCGCGCCGCAGGCGGCTGGGGCAAGTGGGTGCGGCTCAACGTGGGGGGCACGGTGTTCCT 107
|.||||||||||||||||.|||..||||||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct 149 GTGGGGGCGGGCGGCCGCCCCGGGGGCGGCTGGGGCAAGTGGGTGCGGCTGAACGTGGGGGGCACGGTGTTCCT 222
Query 108 GACCACCCGGCAGACGCTGTGCCGCGAGCAGAAGTCCTTCCTCAGCCGCCTGTGCCAGGGGGAAGAGCTGCAGT 181
|||||||||.|||||||||||.||.|||||||||||||||||||||||||||||.|||||.||||||||.||.|
Sbjct 223 GACCACCCGCCAGACGCTGTGTCGGGAGCAGAAGTCCTTCCTCAGCCGCCTGTGTCAGGGCGAAGAGCTTCAAT 296
Query 182 CGGACCGGGATGAGACCGGGGCCTACCTCATTGACCGTGACCCCACCTACTTCGGGCCCATCCTGAACTTCCTC 255
|||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 297 CGGACAGGGATGAGACCGGGGCCTACCTCATTGACCGTGACCCCACCTACTTCGGGCCCATCCTGAATTTCCTC 370
Query 256 CGGCATGGCAAGCTGGTGCTGGACAAGGACATGGCTGAGGAGGGGGTCCTGGAGGAAGCCGAGTTCTACAACAT 329
.|||||||.||..||||||||||||||||||||||.|||||||||||||||||||||||.||||||||||||||
Sbjct 371 AGGCATGGAAAATTGGTGCTGGACAAGGACATGGCCGAGGAGGGGGTCCTGGAGGAAGCAGAGTTCTACAACAT 444
Query 330 CGGCCCGCTGATCCGCATCATCAAAGACCGGATGGAAGAGAAGGACTACACGGTCACCCAGGTCCCACCCAAGC 403
.||.||.|||||.||.||||||||||||.|||||||.|||||.||||||||.||..|||||||.|||||.||||
Sbjct 445 TGGTCCTCTGATTCGAATCATCAAAGACAGGATGGAGGAGAAAGACTACACAGTGGCCCAGGTGCCACCTAAGC 518
Query 404 ATGTGTACCGCGTGCTGCAGTGCCAGGAGGAGGAGCTCACGCAAATGGTCTCCACCATGTCTGATGGCTGGCGC 477
||||.|||||.||||||||||||||.||||||||||||||.||.|||||.|||||.|||||.||.|||||||||
Sbjct 519 ATGTATACCGAGTGCTGCAGTGCCAAGAGGAGGAGCTCACACAGATGGTATCCACTATGTCCGACGGCTGGCGC 592
Query 478 TTCGAGCAGCTGGTGAACATCGGCTCCTCCTACAACTACGGCAGCGAGGACCAGGCAGAGTTCCTGTGTGTGGT 551
||||||||||||||||||||||||||||||||||||||.||.||.|||||||||||.|||||||||||||||||
Sbjct 593 TTCGAGCAGCTGGTGAACATCGGCTCCTCCTACAACTATGGGAGTGAGGACCAGGCCGAGTTCCTGTGTGTGGT 666
Query 552 GTCCAAGGAGCTCCACAGCACCCCAAACGGGCTGAGCTCAGAGTCCAGCCGCAAAACCAAGAGCACGGAGGAGC 625
|||.|||||||||||||||.|||||.||||.||||||||.|||||||..|||||..|||||||||||||.||||
Sbjct 667 GTCTAAGGAGCTCCACAGCTCCCCACACGGCCTGAGCTCCGAGTCCACTCGCAAGGCCAAGAGCACGGACGAGC 740
Query 626 AGCTGGAGGAGCAGCAGCAGCAGGAGGAGGAGGTGGAGGAGGTGGAGGTGGAACAGGTGCAGGTGGAGGCAGAT 699
|||||||||||||||.||.|| ||||||||||||||||||||||||..|||||||||||||||||.|||
Sbjct 741 AGCTGGAGGAGCAGCGGCGGC------AGGAGGTGGAGGAGGTGGAGGTGGCCCAGGTGCAGGTGGAGGCGGAT 808
Query 700 GCACAGGAGAAAGGTTCCCGTCCGCACCCTCTCAGACCTGAGGCTGAGCTTGC-AGTGA------GGGCTTCTC 766
||.||||||||||| |.|.|.||||.|| |..||||..|| |||| |.||| |||| |||
Sbjct 809 GCCCAGGAGAAAGG-TGCAGCCCGCCCC--------CAAGAGGACGA--TTGCTAATGACAGCCCGGGC--CTC 869
Query 767 CTCGGCCCCTCGCCC-------------GCC-CCCAGAGCT----------GCCATCCCTGCTGTTACAAGCCA 816
| || |||||.||| ||| ||..||.|| |||| ||..|||.||||||||||
Sbjct 870 C-CG--CCCTCTCCCTGCTGGAGCAGCTGCCGCCGGGAACTGCGGGGGCGGGCCA-CCAGGCTATTACAAGCCA 939
Query 817 GAGGCACCCGGATGTGAGGCCCCAGATCACCTCCAGGGACTTGGGGTTCCCATC-------------------- 870
||||||||||||||||||.|||||||||||||||||||||||||||||||.|||
Sbjct 940 GAGGCACCCGGATGTGAGCCCCCAGATCACCTCCAGGGACTTGGGGTTCCGATCTGAAATCCTTTATTTTTGTA 1013
Query 871 -------------------------------------------------------------------------- 870
Sbjct 1014 CCACGGGGTGGGCCCCTGGCCCGAGGAGGAAGACAAGCCCTCTACCTTGTCAGTGCTGCCTGCATCTGCCGGGC 1087
Query 871 -------------------------------------------------------------------------- 870
Sbjct 1088 TGAGACTCACTCCTGCCTTGGGGCCCAGGCCTGGGGCCCTCTGGGACCTTGGAAGGCCTGACATGGGTCCTGGG 1161
Query 871 -------------------------------------------------------------------------- 870
Sbjct 1162 GTCTCCAGGCAGAGACGCCAAGGCCAAACTGTGGCACTACCTACCCATATCTTCCAGGCCCTTTTGTCCCCTCA 1235
Query 871 -------------------------------------------------------------------------- 870
Sbjct 1236 CCTGGGCGCCCTTGCTGCATGGCGGATACACTCCCTCCCAGTCCCATCATAGCACCTCTTAGAGCCTCAGTCTC 1309
Query 871 -------------------------------------------------------------------------- 870
Sbjct 1310 TATGGCACCATAGGGTCATCCTCTCCTCCCACCTACCTCACAGGGTTGTTGTGAGAATCAGGGAGGATCATGGG 1383
Query 871 -------------------------------------------------------------------------- 870
Sbjct 1384 GTTCCTGGGAGCCCTGAGTGTGTTGGGGCTACAATCATTACCTTCTTAGGGGAAGGGCTCTAGCCCCGCCCCTG 1457
Query 871 -------------------------------------------------------------------------- 870
Sbjct 1458 TATGGGACACTATGGCCTCAGATACTGGTGGGGGACAATGTGAGGACTTTGCCAGGCAGGAAGGAAGTTACAGG 1531
Query 871 -------------------------------------------------------------------------- 870
Sbjct 1532 CTTAACAGCACCTTGGCCACCACTTCTCTGTGCCACCGTGTGTTTGGCAGCAGAGTACAGTGTCCAGGGACTTG 1605
Query 871 -------------------------------------------------------------------------- 870
Sbjct 1606 GGATGGGGAAGGGGACAGGTGTAACGGGTTGAGCTGTCCCGCCCGTGTCTTGACCACCCCGGGATGGGCACATG 1679
Query 871 ---------------------------------------------------------------- 870
Sbjct 1680 TCTGTCAGTTGTGTCCCACCCGCCATGAAATAAAGCTGAACAAACAGGCTTGGCCTGGCTGCCA 1743
