Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_12643
• Subject: XM_005278062.4
• Aligned Length: 1191
• Identities: 764
• Gaps: 399

Alignment

Query    1  -------------------ATGC------CACTATTGTGGATCA---------CCGGCCCCAGGTACCATCTC-  39
                               |.||      |.||| .|.|||.||         .|||||||   |.||..||| 
Sbjct    1  ATGGAGCCGCGCACAGGGGACGCCGCGGACCCTA-GGGGGAGCAGAGGAGGCCGCGGCCCC---TCCCCGCTCG  70

Query   40  --ATCCTTCTATCG-GAGGC--CTCCTG--------------------CCT--CAGGGCAAACT-------ATG  79
              ..||  |||.|| ..|||  ||||||                    |||  |.|.||.|.||       |.|
Sbjct   71  CGGGCC--CTAGCGCCCGGCAGCTCCTGGCGCGGTTGGACGCGCGCCCCCTGGCGGCGCGAGCTGCGGTCGACG  142

Query   80  T----------------------------ACA-----CCTGTGTCCTTTATTCCAGCA-----CCGTT------  109
            |                            |||     ||||.|         ||.|.|     |.|||      
Sbjct  143  TGGCAGCGCTGGTACGCAGGGCGGGCGCCACATTGCGCCTGCG---------CCGGAAGGAGGCTGTTAGCGTG  207

Query  110  --------------------GGTTAGAGACATGTAACGC--ACCT----CCCCAATT---GAT--------CCA  146
                                |||.|.||||| ||  |||  .|||    ||.|.|||   |||        |||
Sbjct  208  CTGGACTCTGCGGACATAGAGGTCACAGACA-GT--CGCCTGCCTCATGCCACTATTGTGGATCACCGGCCCCA  278

Query  147  GGGTAAGGCACGTAGTGCTCCGAAGCCATCCCAGGCCTCTGGTCATTTCTCTGTGGAGCTGGTTCGCGGTTACG  220
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  279  GGGTAAGGCACGTAGTGCTCCGAAGCCATCCCAGGCCTCTGGTCATTTCTCTGTGGAGCTGGTTCGCGGTTACG  352

Query  221  CAGGCTTTGGCCTCACCTTAGGTGGGGGCCGGGATGTAGCTGGGGACACTCCGCTGGCCGTGCGCGGGCTGCTG  294
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  353  CAGGCTTTGGCCTCACCTTAGGTGGGGGCCGGGATGTAGCTGGGGACACTCCGCTGGCCGTGCGCGGGCTGCTG  426

Query  295  AAGGATGGCCCAGCACAGCGCTGTGGTCGTTTGGAGGTCGGGGACCTCGTGCTCCACATCAACGGAGAGTCAAC  368
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  427  AAGGATGGCCCAGCACAGCGCTGTGGTCGTTTGGAGGTCGGGGACCTCGTGCTCCACATCAACGGAGAGTCAAC  500

Query  369  GCAGGGCCTCACCCATGCCCAGGCCGTGGAGCGGATCCGAGCTGGAGGCCCCCAGCTCCACCTGGTTATTCGTC  442
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  501  GCAGGGCCTCACCCATGCCCAGGCCGTGGAGCGGATCCGAGCTGGAGGCCCCCAGCTCCACCTGGTTATTCGTC  574

Query  443  GGCCTCTGGAGACCCACCCTGGCAAGCCTCGAGGGGTGGGAGAGCCCCGAAAAGGAGTT---------------  501
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||               
Sbjct  575  GGCCTCTGGAGACCCACCCTGGCAAGCCTCGAGGGGTGGGAGAGCCCCGAAAAGGAGTTGTCCCGTCATGGCCA  648

Query  502  GATCGCAGCCCAGATCCTGGAGGGCCGGAGGTAACGGGGTCTCGCAGCAGCAGCACTTCCCTAGTTCAGCACCC  575
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  649  GATCGCAGCCCAGATCCTGGAGGGCCGGAGGTAACGGGGTCTCGCAGCAGCAGCACTTCCCTAGTTCAGCACCC  722

Query  576  TCCATCCCGGACGACGCTCAAGAAGACCCGGGGCAGCCCGGAGCCTAGTCCAGAGGCGGCCGCCGATGGCCCCA  649
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  723  TCCATCCCGGACGACGCTCAAGAAGACCCGGGGCAGCCCGGAGCCTAGTCCAGAGGCGGCCGCCGATGGCCCCA  796

Query  650  CGGTTTCTCCTCCTGAGCGCCGCGCTGAGGATCCCAACGACCAGATCCCGGGTTCCCCGGGGCCCTGGCTAGTG  723
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  797  CGGTTTCTCCTCCTGAGCGCCGCGCTGAGGATCCCAACGACCAGATCCCGGGTTCCCCGGGGCCCTGGCTAGTG  870

Query  724  CCCAGCGAGGAACGGCTCTCGCGGGCCCTAGGGGTCCGGGGGGGCAGCGCAGCTCGCTCAGGAGATGGCAGCCG  797
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct  871  CCCAGCGAGGAACGGCTCTCGCGGGCCCTAGGGGTCC-GGGGGGCAGCGCAGCTCGCTCAGGAGATGGCAGCCG  943

Query  798  GAAGGCGGAGACACTGAGCCTACCTCTGACAGCGCGGGGCTCACTAGTTACCGCCCAACCTGGATCCGGCGCGT  871
            ||||||||||||||                                                            
Sbjct  944  GAAGGCGGAGACAC------------------------------------------------------------  957

Query  872  GTGGCCGCTGGGCACTTGGCACCTCCCCAAGAGCTTCCACTTGGTTTGGTCCCCCCACCCGCTGCTCAGTGGCT  945
                                                                                      
Sbjct  958  --------------------------------------------------------------------------  957

Query  946  CTGACCACACTCCCCTCGCAGCGTCAGTGGTACGACCCTTCCAGCCGGCTAGCCTGCGCTTCTGGTTCTGGGAG  1019
                                                                                      
Sbjct  958  --------------------------------------------------------------------------  957

Query 1020  GGGGAGG  1026
                   
Sbjct  958  -------  957