Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12651
- Subject:
- NR_037590.1
- Aligned Length:
- 2777
- Identities:
- 1196
- Gaps:
- 1454
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCTTCCCTGCTTCTTTAAGCGTCCACTGGCTGCCGGGCGGCCGCAGTCTCAGCTCTGGGCATCTGGGGAGCCCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGCGGCTTCGCCCAGGCATCCGCGCGGGCGCCTGCGGTCTGTCCCACCTCCTCTGCTAACGCACCCTTGAAGTT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTGCAGCACCAGGAAAAGAGGGCAAGGAAGAAGGAGAGGGGAAGCGAAAGCATACCCTAAAACATTTACTTAAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGAGAAAAGAAAGGGGGTCGCAGAAATGGCTGGGGCAATTATAGAAAACATGAGTACCAAGAAGCTCTGCATTG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTGGAGGGATTCTTCTGGTTTTCCAAATCGTTGCCTTTCTGGTGGGAGGCTTGATCGGAGGCTAAAGCAGAAGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATCACTGTTACTTGGGGAGTGACTTCAAGGCCAGCTTCAACAACTTAGTGGGACCCTGTCTCAACTCCAGCACC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CACAACAGCAGTACCCTACACGGCAATAAAATGTGTGGATGTCCGTAAGAACCACCATAAAACAAGATGGCTGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGCCTTGGGGACCTAACAAGTGTGACAAGATCCGTGACATCGAGGAAGCAATTCCAAGGGAAATTGAAGCAAAT 592
Query 1 ------------------------------------ATGGAGATGAGTCCTTGGTTCCAATTCATGCTGTTTAT 38
||||||||||||||.||||||||.||.|||||||||||
Sbjct 593 GACATTGTGTTTTCTGTACACATTCCCCTCCCTTCTATGGAGATGAGTCCATGGTTCCAGTTTATGCTGTTTAT 666
Query 39 CCTGCAGCTGGACATTGCCTTCAAGCTAAACAACCAAATCAGAGAAAATGCAGAAGTCTCCATGGACGTTTCCC 112
|.|||||||.||||||||.||||||||.|||||||||||||||||||||||||||.|.||||||||.|||||||
Sbjct 667 CTTGCAGCTAGACATTGCTTTCAAGCTGAACAACCAAATCAGAGAAAATGCAGAAATTTCCATGGATGTTTCCC 740
Query 113 TGGCTTACCGTGATGACGCATTTGCTGAGTGGACTGAAATGGCCCATGAAAGAGTACCACGGAAACTCAAATGC 186
|||.||||||||||||....|||.||||.||||||||||||||||||||||||||||||||.|||||||||||.
Sbjct 741 TGGGTTACCGTGATGATATGTTTTCTGAATGGACTGAAATGGCCCATGAAAGAGTACCACGTAAACTCAAATGT 814
Query 187 ACCTTCACATCTCCCAAGACTCCAGAGCATGAGGGCCGTTACTATGAATGTGATGTCCTTCCTTTCATGGAAAT 260
||.||.|||||.||||||||.||||||||.||.||.|||||.|||.|.||||||||||||||||||||||||||
Sbjct 815 ACTTTTACATCCCCCAAGACCCCAGAGCACGAAGGTCGTTATTATAATTGTGATGTCCTTCCTTTCATGGAAAT 888
Query 261 TGGGTCTGTGGCCCATAAGTTTTACCTTTTAAACATCCGGCTGCCTGTGAATGAGAAGAAGAAAATCAATGTGG 334
||||||.|||||.|||||||.|||||||.||||.||||||||.|||||.||||||||.||||||||||||||.|
Sbjct 889 TGGGTCAGTGGCTCATAAGTATTACCTTCTAAATATCCGGCTACCTGTAAATGAGAAAAAGAAAATCAATGTTG 962
Query 335 GAATTGGGGAGATAAAGGATATCCGGTTGGTGGGGATCCACCAAAATGGAGGCTTCACCAAGGTGTGGTTTGCC 408
|||||||||||||||||||.||.|||||||||||.|||||||||||.|||||.|||||.|||||.||||||||.
Sbjct 963 GAATTGGGGAGATAAAGGACATTCGGTTGGTGGGAATCCACCAAAACGGAGGTTTCACTAAGGTATGGTTTGCT 1036
Query 409 ATGAAGACCTTCCTTACGCCCAGCATCTTCATCATTATGGTGTGGTATTGGAGGAGGATCACCATGATGTCCCG 482
|||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ATGAAGACCTTCCTTACACCCAGCATCTTCATCATTATGGTGTGGTATTGGAGGAGGATCACCATGATGTCCCG 1110
Query 483 ACCCCCAGTGCTTCTGGAAAAAGTCATCTTTGCCCTTGGGATTTCCATGACCTTTATCAATATCCCAGTGGAAT 556
|||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct 1111 ACCTCCAGTGCTTCTGGAAAAAGTCATCTTTGCCCTTGGGATTTCCATGACCTTTATCAATATCCCTGTGGAAT 1184
Query 557 GGTTTTCCATCGGGTTTGACTGGACCTGGATGCTGCTGTTTGGTGACATCCGACAGGGCATCTTCTATGCGATG 630
|||||||.||.||.|||||||||||||||||||||.|.||||||||||||||||||||||||||||||||.|||
Sbjct 1185 GGTTTTCTATTGGATTTGACTGGACCTGGATGCTGTTATTTGGTGACATCCGACAGGGCATCTTCTATGCAATG 1258
Query 631 CTTCTGTCCTTCTGGATCATCTTCTGTGGCGAGCACATGATGGATCAGCACGAGCGGAACCACATCGCAGGGTA 704
|||||.||.||||||||||||||||||||||||||||||||||||||.||.||.|||||.|||||.||||||||
Sbjct 1259 CTTCTTTCTTTCTGGATCATCTTCTGTGGCGAGCACATGATGGATCAACATGAACGGAATCACATTGCAGGGTA 1332
Query 705 TTGGAAGCAAGTCGGACCCATTGCCGTTGGCTCCTTCTGCCTCTTCATATTTGACATGTGTGAGAGAGGGGTAC 778
.|||||||||||.|||||.|||||.||||||||||||||||||||||||||||||||||||||.|||||.||||
Sbjct 1333 CTGGAAGCAAGTTGGACCAATTGCTGTTGGCTCCTTCTGCCTCTTCATATTTGACATGTGTGAAAGAGGAGTAC 1406
Query 779 AACTCACGAATCCCTTCTACAGTATCTGGACTACAGACATTGGAACAGAGCTGGCCATGGCCTTCATCATCGTG 852
|||||||.|||||.|||||||||||||||||||||||..||||||||||.|||||.|||||.||||||||.|||
Sbjct 1407 AACTCACAAATCCTTTCTACAGTATCTGGACTACAGATGTTGGAACAGAACTGGCTATGGCTTTCATCATTGTG 1480
Query 853 GCTGGAATCTGCCTCTGCCTCTACTTCCTGTTTCTATGCTTCATGGTATTTCAGGTGTTTCGGAACATCAGTGG 926
||.||.|||||||||||||||||.|||||||||||.||||||||||||||||||||.|||.|.|||||||||||
Sbjct 1481 GCAGGTATCTGCCTCTGCCTCTATTTCCTGTTTCTGTGCTTCATGGTATTTCAGGTATTTAGAAACATCAGTGG 1554
Query 927 GAAGCAGTCCAGCCTGCCAGCTATGAGCAAAGTCCGGCGGCTACACTATGAGGGGCTAATTTTTAGGTTCAAGT 1000
|||||||||.|||||.|||||.|||||||||||||||.||||.|||||||||||.||.||.||.||||||||||
Sbjct 1555 GAAGCAGTCTAGCCTCCCAGCCATGAGCAAAGTCCGGAGGCTGCACTATGAGGGTCTGATCTTCAGGTTCAAGT 1628
Query 1001 TCCTCATGCTTATCACCTTGGCCTGCGCTGCCATGACTGTCATCTTCTTCATCGTTAGTCAGGTAACGGAAGGC 1074
||||||||||||||||||||||.||.||||||||||||||.|||||||||||||||||||||||..|.||||||
Sbjct 1629 TCCTCATGCTTATCACCTTGGCTTGTGCTGCCATGACTGTTATCTTCTTCATCGTTAGTCAGGTGTCAGAAGGC 1702
Query 1075 CATTGGAAATGGGGCGGCGTCACAGTCCAAGTGAACAGTGCCTTTTTCACAGGCATCTATGGGATGTGGAATCT 1148
||||||||||||||.||.||||||||.|||||||.||||||.||.|||||.||.|||||||||||||||||.||
Sbjct 1703 CATTGGAAATGGGGTGGTGTCACAGTTCAAGTGAGCAGTGCTTTCTTCACTGGAATCTATGGGATGTGGAACCT 1776
Query 1149 GTATGTCTTTGCTCTGATGTTCTTGTATGCACCATCCCATAAAAACTATGGAGAAGACCAGTCCAATGGCGATC 1222
|||||||||||||.||||||||||||||||||||||||||||.||||||||.|||||||||||.|||||.||.|
Sbjct 1777 GTATGTCTTTGCTTTGATGTTCTTGTATGCACCATCCCATAAGAACTATGGGGAAGACCAGTCTAATGGTGACC 1850
Query 1223 TGGGTGTCCATAGTGGGGAAGAACTCCAGCTCACCACCACTATCACCCATGTGGACGGACCCACTGAGATCTAC 1296
||||||||||.||.|||||||||||.|||||.||.||||||||.||||||||.||.|||||.||||||||||||
Sbjct 1851 TGGGTGTCCACAGCGGGGAAGAACTGCAGCTTACTACCACTATAACCCATGTAGATGGACCAACTGAGATCTAC 1924
Query 1297 AAGTTGACCCGCAAGGAGGCCCAGGAG----------------------------------------------- 1323
|||||||||||.||.||.||.|||||.
Sbjct 1925 AAGTTGACCCGTAAAGAAGCACAGGAATAGGAGGCTATGGTATGGCACTGAGCTGGAATTGTCTCTCTATCCAG 1998
Query 1324 -------------------------------------------------------------------------- 1323
Sbjct 1999 CCTCTTCCCCTGGAGTAGAGATCCTACTATACAGAGCTCAGTGAAAAGTGGATACCTAGTGCTTCTTAGGTATA 2072
Query 1324 -------------------------------------------------------------------------- 1323
Sbjct 2073 GTTTCTTAAAACAACAGATGGACATTTGTCAGATGACCTCCAATGGTGGCTGTTGCAAAACTTCTGCCACTACT 2146
Query 1324 -------------------------------------------------------------------------- 1323
Sbjct 2147 ATATAGCACATGTTAACAAAAACTGATATGACACATTTCCTGTGATCATTGTTAATTAGTGACATAGCAGCATC 2220
Query 1324 -------------------------------------------------------------------------- 1323
Sbjct 2221 TGTAGCAGGTGGGTTAGTAACCCTCACATAGAGGGGTATACTCCTTGGGATGGTTTGGGCCAATAGGGGCTATA 2294
Query 1324 -------------------------------------------------------------------------- 1323
Sbjct 2295 TTGAGTAGTTTGTGACTTTTTTCTGCTTTTGATTCTGGGATATGTTTAAACATTCTTTGCAGTCCAACATTTGC 2368
Query 1324 -------------------------------------------------------------------------- 1323
Sbjct 2369 TGATGTCATAGTCTTTTTACTCTCCTCCATGGGCACTTTTTTCTATTTATATCACCAAGTAGCCAAATGAGTTA 2442
Query 1324 -------------------------------------------------------------------------- 1323
Sbjct 2443 TTTAAGTTGTCAGTACAAATATGTCAACTTTTTAAAAAATGGATTACTATAAAATAACCAAACTTCATGAGAAA 2516
Query 1324 -------------------------------------------------------------------------- 1323
Sbjct 2517 TTTTATCTTACCAGAGGCATTTCAGCTTTGGAACCAAATCTGTGTATTTGATACTAATCTGTCTGTTTGTTTGT 2590
Query 1324 -------------------------------------------------------------------------- 1323
Sbjct 2591 GGATTTTGAGAAATATTTGCTTAACTACCCAAATAGGATTTCTGGTATTAAATGGCCTTTGGGTCCTAAAAGCT 2664
Query 1324 -------------------------------------------------------------------------- 1323
Sbjct 2665 TTTTTTAACTTCTTGCTTAAAATGTGTTTTCTTTTGATAAGATTCTTCAAACAATCTCCAAAAGTGTAAATCTA 2738
Query 1324 --------------------------------------- 1323
Sbjct 2739 ATCATGTGAATAAAATGAATGTAAATATGCAAAAAAAAA 2777
