Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12690
- Subject:
- NR_135275.2
- Aligned Length:
- 2305
- Identities:
- 986
- Gaps:
- 1319
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCCCCGTCCGTTGAGGGCCCGCGCCGCATGGAGGCCGGCTGAGGAGCGCCGCTGCCTCGCCTCGGCTCCCCACA 74
Query 1 ------------------------ATGGACGGGGAGGAGCAGCAGCCACCGCACGAGGCCAACGTGGAACCTGT 50
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GGTGCAGGAAGCCGCCGCCCAGCCATGGACGGGGAGGAGCAGCAGCCACCGCACGAGGCCAACGTGGAACCTGT 148
Query 51 TGTGCCGTCAGAGGCTTCAGAGCCGGTGCC-------------------------------------------- 80
||||||||||||||||||||||||||||||
Sbjct 149 TGTGCCGTCAGAGGCTTCAGAGCCGGTGCCCAGGGTGCTTTCTGGAGACCCCCAGAACCTGTCCGACGTGGACG 222
Query 81 -------------------------------------------------------------------------- 80
Sbjct 223 CCTTCAACCTGCTCCTGGAGATGAAGCTGAAGCGGCGGCGTCAGCGGCCCAACCTGCCGCGCACTGTGACCCAG 296
Query 81 --------------------CAGGGTGTACGTGGTGGGGACAGCCCACTTCAGCGACGACAGCAAGAGGGACGT 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TTGGTGGCTGAGGACGGGAGCAGGGTGTACGTGGTGGGGACAGCCCACTTCAGCGACGACAGCAAGAGGGACGT 370
Query 135 TGTGAAGACCATCCGGGAGGTGCAGCCTGACGTGGTGGTCGTGGAGCTCTGCCAATATCGTGTGTCCATGCTGA 208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TGTGAAGACCATCCGGGAGGTGCAGCCTGACGTGGTGGTCGTGGAGCTCTGCCAATATCGTGTGTCCATGCTGA 444
Query 209 AGATGGACGAGAGCACGCTGCTGCGGGAGGCCCAGGAGCTCAGCCTGGAGAAGCTGCAGCAGGCCGTGAGGCAG 282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AGATGGACGAGAGCACGCTGCTGCGGGAGGCCCAGGAGCTCAGCCTGGAGAAGCTGCAGCAGGCCGTGAGGCAG 518
Query 283 AACGGGCTCATGTCGGGGCTGATGCAGATGCTGCTGCTGAAGGTGTCTGCACACATCACCGAGCAGCTGGGCAT 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AACGGGCTCATGTCGGGGCTGATGCAGATGCTGCTGCTGAAGGTGTCTGCACACATCACCGAGCAGCTGGGCAT 592
Query 357 GGCCCCAGGTGGCGAGTTCAGGGAGGCCTTCAAGGAGGCCAGCAAGGTGCCTTTCTGCAAGTTCCACCTGGGTG 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GGCCCCAGGTGGCGAGTTCAGGGAGGCCTTCAAGGAGGCCAGCAAGGTGCCTTTCTGCAAGTTCCACCTGGGTG 666
Query 431 ACCGACCCATCCCCGTCACCTTCAAGAGGGCCATCGCAGCGCTCTCCTTCTGGCAGAAGGTCAGGCTGGCTTGG 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 ACCGACCCATCCCCGTCACCTTCAAGAGGGCCATCGCAGCGCTCTCCTTCTGGCAGAAGGTCAGGCTGGCTTGG 740
Query 505 GGCCTGTGCTTCCTGTCAGACCCCATCAGCAAGGATGACGTGGAACGCTGCAAGCAGAAGGACCTACTGGAGCA 578
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GGCCTGTGCTTCCTGTCAGACCCCATC----AGGATGACGTGGAACGCTGCAAGCAGAAGGACCTACTGGAGCA 810
Query 579 GATGATGGCCGAGATGATTGGCGAGTTCCCAGACCTGCACCGCACCATCGTCTCGGAGCGCGACGTCTACCTAA 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 811 GATGATGGCCGAGATGATTGGCGAGTTCCCAGACCTGCACCGCACCATCGTCTCGGAGCGCGACGTCTACCTAA 884
Query 653 CCTACATGCTGCGCCAGGCCGCGCGGCGCCTCGAGCTGCCTCGGGCCTCTGACGCCGAGCCCAGGAAGTGCGTC 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 885 CCTACATGCTGCGCCAGGCCGCGCGGCGCCTCGAGCTGCCTCGGGCCTCTGACGCCGAGCCCAGGAAGTGCGTC 958
Query 727 CCCTCCGTGGTCGTGGGCGTCGTGGGCATGGGCCACGTGCCTGGCATCGAGAAGAACTGGAGCACCGACCTCAA 800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 959 CCCTCCGTGGTCGTGGGCGTCGTGGGCATGGGCCACGTGCCTGGCATCGAGAAGAACTGGAGCACCGACCTCAA 1032
Query 801 CATCCAGGAGATCATGACCGTGCCCCCGCCGTCCGTCTCCGGCAGAGTGTCTCGGTTGGCCGTGAAGGCCGCCT 874
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1033 CATCCAGGAGATCATGACCGTGCCCCCGCCGTCCGTCTCCGGCAGAGTGTCTCGGTTGGCCGTGAAGGCCGCCT 1106
Query 875 TCTTCGGCCTGCTGGGCTACAGCCTGTACTGGATGGGCCGCCGCACCGCGAGCCTGGTCCTGTCGCTGCCCGCC 948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1107 TCTTCGGCCTGCTGGGCTACAGCCTGTACTGGATGGGCCGCCGCACCGCGAGCCTGGTCCTGTCGCTGCCCGCC 1180
Query 949 GCGCAGTACTGCCTGCAGAGGGTGACCGAGGCCCGGCACAAG-------------------------------- 990
||||||||||||||||||||||||||||||||||||||||||
Sbjct 1181 GCGCAGTACTGCCTGCAGAGGGTGACCGAGGCCCGGCACAAGTAGGAGACTGCTCCCCGCCCGCTCGGGCCCCT 1254
Query 991 -------------------------------------------------------------------------- 990
Sbjct 1255 GAGGAGCCAGTGCCCCCGCGGCACTTCTGGGTGCCAGGTGCATCCTAGCCCGCCCGAGGCCCCTGCCACCCCCC 1328
Query 991 -------------------------------------------------------------------------- 990
Sbjct 1329 ATGGGGGTCTGGGCCCGGCCTCGCCTGCCCTCCTGGGCCAGTCACCCCTCCCCCAGCCCACCCAAATAAAGGAT 1402
Query 991 -------------------------------------------------------------------------- 990
Sbjct 1403 TATTTAACTGTCTGAGCTCAGGCCTCCCGGCAGCCCCTCCCCTCCCACACTGCAGGGGCCGTTCCCCAGCTTCT 1476
Query 991 -------------------------------------------------------------------------- 990
Sbjct 1477 GGACAAGACACCCAGCTCCGAGGGGGCAGGGGCTTATAGGAGGGGCCGAGGCGTGCGCTGCCCTCTCAGCCCTG 1550
Query 991 -------------------------------------------------------------------------- 990
Sbjct 1551 GTGGCAGGCGGGGGACAATGGCCACTGTCCCTACCTCACTGTGCCTTCCTGTGCTCCGGCCACAGGAGCGTCGG 1624
Query 991 -------------------------------------------------------------------------- 990
Sbjct 1625 CCCAGGGGCGGCTCCTGGGGGCTCCAGGGCAGGCGAGACTGGGAAAGGCCCAGCCCTGGAGCTCCAGCCGACCC 1698
Query 991 -------------------------------------------------------------------------- 990
Sbjct 1699 CACCGTGCCCCTGGCATCCTGGCCCTGGCCGCCACCTCCCTGGCACCGTCTGCCTGCAGGGATTCTGTGTTTTT 1772
Query 991 -------------------------------------------------------------------------- 990
Sbjct 1773 GGCTTTTTTAATGTCTTAAAATCTTTTACTCAGGTAATTTTAATTTCAGAGAGAAAAACTGAAGTAAATGTCAA 1846
Query 991 -------------------------------------------------------------------------- 990
Sbjct 1847 AAAACACCAGCCTTAAATCCAAAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCC 1920
Query 991 -------------------------------------------------------------------------- 990
Sbjct 1921 AAACATCAGCTCTGGGTCCAGGCGTGGCCTCAGCTGGGAGCCTGTGTCCTGAGCCCCCGGAGCGAAGGGGTGCC 1994
Query 991 -------------------------------------------------------------------------- 990
Sbjct 1995 TGGGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAAGGACATGGGCTGTGGCCA 2068
Query 991 -------------------------------------------------------------------------- 990
Sbjct 2069 GGCCTGTCCCGCTCAGGCCCCCTGCCCGGCGGCCGTCTGTGTGCGGGGCCTCCCTCCTGGCTGTCCAGGACACA 2142
Query 991 -------------------------------------------------------------------------- 990
Sbjct 2143 GCCCGTGCAGCCCCAGCCTGGACCCAGGCCATCTCTGGTTGTGTCTGTGCCGACTCGGTGTTGAATCAAATCAG 2216
Query 991 -------------------------------------------------------------------------- 990
Sbjct 2217 GTGTGCGTCAGGAGCCGGCTGTGTCCTTCCTGCCACACTCGGGGATTCATTCCTTAGAAACTGAAATAAATTCT 2290
Query 991 ----------- 990
Sbjct 2291 AATTTTGGAAA 2301
