Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12692
- Subject:
- XM_011539515.2
- Aligned Length:
- 2090
- Identities:
- 776
- Gaps:
- 1138
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCAGGATGATTTACTGATGGACAAAAGCAAAACCCAGCCCCAGCCCCAGCAGCAGCAGCGGCAGCAGCAGCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCCCCAACCTGAGTCCAGCGTATCCGAAGCCCCGTCCACGCCCCTCTCCTCAGAGACCCCCAAGCCGGAGGAAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACAGCGCAGTGCCGGCCCTCAGCCCAGCCGCTGCCCCCCCGGCCCCCAACGGCCCGGACAAGATGCAGATGGAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCACCGCTCCTGCCAGGCTTGAGTTTCCATCAGCCTCCTCAGCAGCCGCCGCCGCCTCAGGAGCCCGCGGCACC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGGCGCGTCGCTGTCGCCGTCCTTCGGCAGCACCTGGTCCACGGGCACCACCAACGCGGTAGAGGACAGCTTCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCCAGGGGATCACCCCAGTCAACGGGACCATGCTCTTCCAGAACTTCCCGCACCATGTCAACCCAGTCTTCGGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGCACTTTCTCCCCGCAGATCGGCCTGGCGCAGACCCAGCACCACCAGCAGCCGCCGCCGCCTGCGCCCGCGCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCAGCCGGCACAGCCAGCGCAGCCACCACAGGCGCAGCCCCCGCAGCAGCGCCGCTCACCCGCCAGCCCCAGCC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGGCGCCCTACGCGCAGAGGAGCGCCGCCGCGGCGTACGGCCACCAGCCCATCATGACCAGCAAGCCGTCCTCG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCTTCGGCGGTTGCAGCCGCTGCTGCCGCAGCCGCCGCCTCGTCGGCCTCGTCCAGCTGGAACACGCACCAAAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CGTGAATGCAGCCTGGAGCGCACCGTCCAACCCCTGGGGCGGCCTGCAGGCGGGCCGGGACCCTCGCCGGGCGG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TCGGTGTGGGCGTGGGTGTGGGTGTCGGGGTGCCTTCCCCGCTCAACCCCATCTCGCCGCTCAAAAAGCCCTTC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCCAGCAACGTGATCGCGCCGCCCAAGTTCCCTCGCGCGGCCCCTCTCACTTCCAAGTCCTGGATGGAGGATAA 962
Query 1 -------------------------------------------------------------------------A 1
.
Sbjct 963 CGCTTTCCGGACCGATAATGGTAACAATCTGTTGCCATTTCAGGACCGGAGTAGGCCCTATGATACTTTTAACT 1036
Query 2 TGCACTCACTGGAGAGTTCACTC----ATTGACATAATGAGAG---------------CTGAAA------AT-- 48
|||||||..|||||| |||| ||.||.||.||.|| | |||||| ||
Sbjct 1037 TGCACTCGTTGGAGA----ACTCCTTAATGGATATGATAAG-GACTGATCATGAACCTCTGAAAGGACGCATGG 1105
Query 49 -GATA-----CCAT--------------TAA---------------------------------------AGGT 63
|||| |||| ||| ||||
Sbjct 1106 GGATAAATTTCCATCATCCAGGAACAGATAATATTATGGCACTTAACACCAGGAGCTATGGGCGGAGACGAGGT 1179
Query 64 CAGTCTTCACTGTTTCCAATGGAAGATGGATTCTTGGATGATGGCCGTGGGGATC-AGCCTCTTCATAGTGGCC 136
|..|||||.||.|||||..|.|||||||..|||.||||||||.|||.|||.|||| |||||..|||| .||||.
Sbjct 1180 CGATCTTCTCTCTTTCCCTTTGAAGATGCCTTCCTGGATGATAGCCATGGTGATCAAGCCTTGTCAT-CTGGCT 1252
Query 137 TGGGTTCACCTCACT-GCTTCAGTCACCAGAATGGGGAAAGAGTGGAACGATATTCTCGAAAGGTGTTTGTAGG 209
|..||||.|| |||| ||| || ||.|||||||||.||||.|||||.||.|||.|||||||||||||.||
Sbjct 1253 TAAGTTCTCC-CACTCGCT---GT---CAAAATGGGGAACGAGTAGAACGCTACTCTAGAAAGGTGTTTGTTGG 1319
Query 210 CGGATTGCCTCCAGACATTGATGAAGATGAGATCACAGCTAGTTTTCGTCGCTTTGGCCCTCTGATTGTGGATT 283
.|||.|.|||||.||.||||||||||||||||||||.||.||.|||||..|.|||||.|||||..|.||.||.|
Sbjct 1320 AGGACTTCCTCCTGATATTGATGAAGATGAGATCACTGCCAGCTTTCGCAGGTTTGGACCTCTCGTAGTAGACT 1393
Query 284 GGCCTCATAAAGCTGAGAGCAAATCCTATTTTCCTCCTAAAGGCTATGCATTCCTGCTGTTTCAAGATGAAAGC 357
|||||||.||||||||.|||||.||.|||||||||||||||||||||||.||.||||||||.|||||.||||||
Sbjct 1394 GGCCTCACAAAGCTGAAAGCAAGTCTTATTTTCCTCCTAAAGGCTATGCCTTTCTGCTGTTCCAAGAGGAAAGC 1467
Query 358 TCTGTGCAGGCTCTCATTGATGCATGCATTGAAGAAGATGGAAAACTCTACCTTTGTGTATCAAGTCCCACTAT 431
||.||.||.|||.|.||.|||||.|||.|.|||||||||||.|||||||||||.|||||.|||||.|||||.||
Sbjct 1468 TCAGTACAAGCTTTGATAGATGCCTGCCTAGAAGAAGATGGGAAACTCTACCTGTGTGTGTCAAGCCCCACCAT 1541
Query 432 CAAGGATAAGCCAGTCCAGATTCGGCCTTGGAATCTCAGTGACAGTGACTTTGTGATGGATGGTTCACAGCCAC 505
||||||.||||||||.||.|||||.||.|||||.||.|||||||||||||||||.|||||||||||.|||||..
Sbjct 1542 CAAGGACAAGCCAGTGCAAATTCGACCATGGAACCTAAGTGACAGTGACTTTGTAATGGATGGTTCTCAGCCTT 1615
Query 506 TTGACCCACGAAAAACTATATTTGTTGGTGGTGTTCCTCGACCATTACGAGCTGTGGAGCTTGCGATGATAATG 579
|.|||||..||||||||||.||||||||.||.|||||.|||||..|.||||||||.||.||.||.|||||.|||
Sbjct 1616 TGGACCCCAGAAAAACTATCTTTGTTGGGGGAGTTCCACGACCCCTTCGAGCTGTTGAACTGGCAATGATCATG 1689
Query 580 GATCGGCTATATGGAGGTGTGTGCTACGCTGGGATTGATACCGACCCTGAGCTAAAATACCCAAAAGGAGCTGG 653
||.||..|.||.||.|||||.|||||.|||||.||||||||.|||||.|||||.||.|||||.|||||.|||||
Sbjct 1690 GACCGTTTGTACGGTGGTGTCTGCTATGCTGGCATTGATACGGACCCAGAGCTGAAGTACCCCAAAGGTGCTGG 1763
Query 654 GAGAGTTGCGTTCTCTAATCAACAGAGTTACATAGCTGCTATCAGTGCCCGCTTTGTTCAGCTGCAGCATGGAG 727
..|.||.||.|||||.|||||.|||||||||||.||.||.|||||.||.||.|||||.|||||.|||||....|
Sbjct 1764 CCGCGTGGCATTCTCCAATCAGCAGAGTTACATTGCAGCCATCAGCGCTCGTTTTGTGCAGCTTCAGCACAATG 1837
Query 728 AGATAGATAAACGGGTGGAAGTTAAGCCATATGTCTTGGATGATCAGCTGTGTGATGAATGTCAGGGGGCCCGT 801
|.||.||.||||||||.|||||.|||||||||||..|||||||||||.||||||||||.||.|||||..|.||.
Sbjct 1838 ACATTGACAAACGGGTTGAAGTAAAGCCATATGTGCTGGATGATCAGATGTGTGATGAGTGCCAGGGCACACGC 1911
Query 802 TGTGGGGGGAAATTTGCTCCATTTTTCTGTGCTAATGTTACCTGTCTGCAGTATTACTGTGAATATTGCTGGGC 875
|||||.|||||.|||||.||.||.||||||||.||.||.||||||||||||||||||||||||||.||||||||
Sbjct 1912 TGTGGTGGGAAGTTTGCCCCGTTCTTCTGTGCCAACGTCACCTGTCTGCAGTATTACTGTGAATACTGCTGGGC 1985
Query 876 -TGCTATCCATTCTCGTGCTGGCAGGGAATTCCACAAGCCCCTGGTGAAGGAAGGCGGTGACCGCCCTCGGCAT 948
.|| ||.|||||.||.||.||..||||.||||||||.||.|||||||||||.||.||.|||||||||||.||.
Sbjct 1986 GAGC-ATACATTCCCGAGCCGGGCGGGAGTTCCACAAACCGCTGGTGAAGGAGGGAGGCGACCGCCCTCGTCAC 2058
Query 949 ATTTCATTCCGCTGGAAC 966
.|..|.||||||||||.|
Sbjct 2059 GTCCCGTTCCGCTGGAGC 2076
