Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12742
- Subject:
- NM_177381.3
- Aligned Length:
- 2484
- Identities:
- 1194
- Gaps:
- 1152
Alignment
Query 1 ATGGCGGAGGCGGCGCTGTTGCTGCTGCCTGAGGCGGCGGCGGAGCGGGACGCTAGGGAAAAGCTGGCTCTCTG 74
||||||||||||||||||.||||||.|||.|||||||||||.|||||||||||..|.||.||||||.|||||||
Sbjct 1 ATGGCGGAGGCGGCGCTGCTGCTGCCGCCCGAGGCGGCGGCCGAGCGGGACGCCCGCGAGAAGCTGTCTCTCTG 74
Query 75 GGATCGGAGACCGGACACGACGGCGCCGCTGACCGACAGGCAGACGGACTCGGTATTGGAGCTGAAGGCGGCGG 148
||||.|||||||.|||.|||.||||||||||||.||||||||||||||||||||..|||||||.||||||||.|
Sbjct 75 GGATGGGAGACCCGACTCGATGGCGCCGCTGACAGACAGGCAGACGGACTCGGTGCTGGAGCTCAAGGCGGCCG 148
Query 149 CAGAGAACTTGCCGGTGCCAGCTGAGCTTCCAATTGAAGACTTGTGCAGTTTAACATCCCAGTCACTGCCCATT 222
..||||||.||||||||||.||.|||||.|||||||||||..|.|||||.|||.||||||||||.|||||||||
Sbjct 149 TGGAGAACCTGCCGGTGCCCGCCGAGCTCCCAATTGAAGATGTATGCAGCTTAGCATCCCAGTCGCTGCCCATT 222
Query 223 GAACTGACTTCAGTAGTGCCTGAATCTACAGAAGACATTCTCTTGAAGGGCTTCACTTCCTTAGGAATGGAAGA 296
||.||||||.|.|||||||||||.||||||||||||||.||.||.|||||||||||||||||||||||||||||
Sbjct 223 GAGCTGACTGCTGTAGTGCCTGACTCTACAGAAGACATCCTGTTAAAGGGCTTCACTTCCTTAGGAATGGAAGA 296
Query 297 AGAAAGAATTGAAACCGCACAGCAGTTTTTCTCATGGTTTGCAAAGCTGCAAACTCAGATGGATCAAGATGAAG 370
||||||.|||||.||.||.||||||||||||||||||||||||||.||||||||||||||||||||.|||||||
Sbjct 297 AGAAAGGATTGAGACTGCGCAGCAGTTTTTCTCATGGTTTGCAAAACTGCAAACTCAGATGGATCAGGATGAAG 370
Query 371 GAACTAAATATAGACAGATGAGGGATTACTTGTCTGGGTTTCAGGAGCAGTGTGATGCTATATTGAATGATGTA 444
||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||.|||||||.||.
Sbjct 371 GAACTAAATATAGACAGATGAGGGATTACTTGTCTGGGTTTCAGGAACAGTGTGATGCTATACTGAATGACGTG 444
Query 445 AACAGTGCTCTTCAGCATCTGGAGTCTTTGCAGAAACAGTATCTTTTTGTGTCCAATAAGACAGGAACCCTACA 518
|||||||||||.|||||||.||||||.|||||||||||||||||||||||||||||||||||||||||.||.||
Sbjct 445 AACAGTGCTCTGCAGCATCAGGAGTCGTTGCAGAAACAGTATCTTTTTGTGTCCAATAAGACAGGAACTCTTCA 518
Query 519 TGAAGCCTGTGAACAGCTCCTAAAAGAACAGTCGGAACTTGTTGATCTGGCTGAAAACATTCAACAAAAGCTTT 592
||||||||||||||||||||||||||||||||||||.||||.||||||.|||||..||||.|||||.|||||.|
Sbjct 519 TGAAGCCTGTGAACAGCTCCTAAAAGAACAGTCGGAGCTTGCTGATCTTGCTGAGCACATCCAACAGAAGCTGT 592
Query 593 CCTATTTTAACGAATTGGAAACTATTAACACAAAATTGAATTCCCCTACATTGTCGGTGAATAGTGACGGATTT 666
|.||||||||.||.|||||.||.||||||||||||||||||||||||||.|||||.|||||||||||.||||||
Sbjct 593 CTTATTTTAATGAGTTGGAGACGATTAACACAAAATTGAATTCCCCTACGTTGTCTGTGAATAGTGAAGGATTT 666
Query 667 ATACCTATGCTGGCCAAGTTAGATGATTGTATAACATATATCTCATCTCATCCTAATTTTAAAGATTATCCCAT 740
||.||||||.|||||||||||||||||||||||||||||||.|||||.|||||||||||||||||||||||..|
Sbjct 667 ATCCCTATGTTGGCCAAGTTAGATGATTGTATAACATATATTTCATCGCATCCTAATTTTAAAGATTATCCTGT 740
Query 741 ATATTTGCTGAAGTTTAAACAGTGTCTTTCTAAAGCTTTGCACCTCATGAAGACATATACTGTGAACACACTAC 814
|||.||.||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct 741 ATACTTACTGAAGTTTAAACAATGTCTTTCTAAAGCTTTGCACCTCATGAAGACATATACTGTGAACACACTGC 814
Query 815 AGACCCTCACAAGTCAGTTACTGAAAAGGGATCCTTCATCTGTACCTAATGCAGACAATGCCTTCACATTATTT 888
||||.|||||||.|||||||||.||||||||.||.|||||.||.||||||||||||||||||||||||.|||||
Sbjct 815 AGACTCTCACAAATCAGTTACTAAAAAGGGACCCCTCATCAGTCCCTAATGCAGACAATGCCTTCACACTATTT 888
Query 889 TATGTGAAATTTCGAGCTGCTGCCCCCAAAGTCAGAACTCTTATTGAACAAATAGAACTGCGGTCTGAAAAAAT 962
|||||||||||||||||.||||||||.||||||||||||||.||||||||.|||||.|..||.||||||||.||
Sbjct 889 TATGTGAAATTTCGAGCCGCTGCCCCTAAAGTCAGAACTCTAATTGAACAGATAGAGCAACGATCTGAAAAGAT 962
Query 963 ACCTGAATACCAACAACTGCTAAATGATATCCACCAGTGTTACCTTGATCAGCGGGAGCTCCTTTTGGGCCCTA 1036
|||.||||||||.||.||.||.|||||.||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct 963 ACCCGAATACCAGCACCTTCTCAATGACATCCACCAGTGTTACCTTGATCAGCGGGAGCTCCTTTTGGGCCCAA 1036
Query 1037 GTATTGCTTGCACTGTTGCAGAGTTAACCAGCCAAAATAATAGAGATCACTGTGCCTTGGTTCGTAGTGGCTGT 1110
|||||||.|.||||||..||||||||||||||||.||.||.|||||.||.||||||||||||||.|||||||||
Sbjct 1037 GTATTGCCTACACTGTCACAGAGTTAACCAGCCAGAACAACAGAGACCATTGTGCCTTGGTTCGCAGTGGCTGT 1110
Query 1111 GCCTTCATGGTTCATGTCTGCCAGGATGAACACCAACTTTACAATGAATTTTTCACAAAACCAACATCAAAATT 1184
|||||.|||||.|||||||||||.|||||.|||||||||||||||||||||||||||||.||||||||||||||
Sbjct 1111 GCCTTTATGGTCCATGTCTGCCAAGATGAGCACCAACTTTACAATGAATTTTTCACAAAGCCAACATCAAAATT 1184
Query 1185 AGATGAGCTTTTGGAGAAACTGTGTGTGTCATTGTATGATGTCTTCAGGCCATTGATCATTCATGTTATTCACT 1258
|||||||||.|||||||||.||||.|||||.|||||||||||.|||.||||.||||||||.|||||.|||||||
Sbjct 1185 AGATGAGCTATTGGAGAAATTGTGCGTGTCGTTGTATGATGTGTTCCGGCCCTTGATCATCCATGTCATTCACT 1258
Query 1259 TAGAGACTCTGTCGGAACTTTGTGGGATTCTTAAAAATGAAGTGCTTGAAGATCATGTGCAGAACAATGGTAAA 1332
||||||||.|.|||||.||.|||||||||||||||||.||||||||||||||.||.||.|||.||||.|.|.||
Sbjct 1259 TAGAGACTTTATCGGAGCTCTGTGGGATTCTTAAAAACGAAGTGCTTGAAGACCACGTACAGCACAACGCTGAA 1332
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 1333 CAACTGGGGGCATTTGCAGCTGGAGTAAAGCAGATGTTGGAAGATGTACAAGAGAGGCTTGTGTATCGAACCCA 1406
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 1407 TATCTACATTCAGACGGACATCACAGGCTACAAACCAGCGCCTGGAGATCTGGCATATCCTGATAAGCTAGTCA 1480
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 1481 TGATGGAGCAAATCGCACAGAGTTTAAAGGATGAGCAGAAGAAGGCGCCTTCAGAAGCTTCCTTTTCAGATGTA 1554
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 1555 CGGTTAGAAGAAGGAGAAGCCAGTGGTTTAAGAAAGTCTGGTTCAACAGACTCCCTCAATCCTAGACCACAGAC 1628
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 1629 GACGATCTCTCCAGCAGATCTTCACGGGATGTGGTATCCCACAGTTCGAAGGACACTTGTCTGTCTCTCCAAAT 1702
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 1703 TATATAGATGCATAGATAGGGCGGTGTTCCAAGGATTATCACAGGAAGCCTTGTCTGCCTGCATACAGTCCTTG 1776
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 1777 CTAGGAGCATCAGAGTCTATCAGCAAAAACAAGACTCAGATTGATGGACAACTTTTCTTAATTAAACACCTTTT 1850
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 1851 GATTCTTCGAGAACAAATTGCTCCATTTCACACTGAATTCACCATTAAGGAAATTTCCCTGGACCTCAAGAAAA 1924
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 1925 CTAGAGATGCAGCATTTAAAATCCTGAACCCTATGACTGTTCCACGATTTTTTAGGCTGAATAGCAACAATGCC 1998
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 1999 TTGATAGAGTTCTTGTTGGAGGGGACTCCTGAGATCAGAGAACATTATCTTGACTCTAAGAAGGACGTAGACCG 2072
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 2073 GCACCTGAAGTCAGCCTGTGAGCAGTTCATTCAGCAGCAGACCAGGCTGTTTGTAGAGCAGCTGGAGGAGTTCA 2146
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 2147 TGACAAAGGTATCAGCATTGAAAACCATGGCCAGCCAGGGAGGCCCCAAGTACACCCTCTCACAGCAGCCGTGG 2220
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 2221 GCACAGCCAGCAAAGGTCAATGACCTCGTGGCCACTGCCTACAAGACAATAAAGACGAAGCTGCCGCTGACACT 2294
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 2295 GAGAAGCATGGCTTTGTATTTGTCCAATAAGGACACGGAGTTCATCTTGTTTAAGCCTGTCAGGAATAACATTC 2368
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 2369 AGCAAGTCTTCCAGAAGTTCCACGCTCTGCTAAAGGAAGAGTTCAGTTCTGAAGACATCCAAATCATTGCTTGT 2442
Query 1333 ------------------------------------------ 1332
Sbjct 2443 CCTTCCATGGAACAGCTGAACCTCCTGCTGTCAGTTTCAAAG 2484
