Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12783
- Subject:
- NM_001308339.1
- Aligned Length:
- 4048
- Identities:
- 89
- Gaps:
- 3950
Alignment
Query 1 ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATT 148
|..|||||.|.|.|||||||||.|||||
Sbjct 1 --------------------------------------------ATGGGCACCCACCACCATGCCCAGCTAA-- 28
Query 149 TTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG--- 219
|||||||||||||||||||||||.|||||||||||||||..|||||||||||||||||||||||||||||
Sbjct 29 -TTTTTGTATTTTTAGTAGAGATGAGGTTTCACCATGTTGATCAGGCTGGTCTCGAACTCCTGACCTCAAGCAA 101
Query 220 -------------------------------------------------------------------------- 219
Sbjct 102 TTCACCTGCCTCGGCCTCCCGAAGTGCTGAGATTACAGTTGTGAGCCAACATGCCCAGCCAGGATTTTTGTACC 175
Query 220 -------------------------------------------------------------------------- 219
Sbjct 176 AATGGCTAGAAGCAGATCGTCATGGCAAGAGCCAAGGTGCTGCAAATACGACTTCAGGCGAAAATTTTGACCAG 249
Query 220 -------------------------------------------------------------------------- 219
Sbjct 250 AGTCCTTTGAGAAGAACATTCAAATCCAAAGTTCTCGCCCACTATCCTCAGAATATAGAATGGAACCCTTTTGA 323
Query 220 -------------------------------------------------------------------------- 219
Sbjct 324 TCAAGATGCGGTGAACATGTTGTGCATGCCTAAAGGGCTATCTTTCAGGACACAAACGGACAATAAAGACCCCC 397
Query 220 -------------------------------------------------------------------------- 219
Sbjct 398 AGTTTCACTCATTTATAATTACCAGGGAAGATGGTTCTCGCACCTATGGTTTTGTTCTCACTTTTTATGAAGAA 471
Query 220 -------------------------------------------------------------------------- 219
Sbjct 472 GTTACAAGTAAGCAAATCTGCACAGCAATGCAGACACTTTACCAGATGCACAACGCTGAGCATTACAGCAGTGT 545
Query 220 -------------------------------------------------------------------------- 219
Sbjct 546 GTATGCTTCATCTTCCTGCAGTATGGACTCATTGGCAAGTAGTCTTGATGAAGGAGATACAACTTCCCTTTTGA 619
Query 220 -------------------------------------------------------------------------- 219
Sbjct 620 AACTCCAGCGATACAACTCCTATGATATTAGCAGAGACACCCTGTATGTTTCAAAAAGTATATGCTTGATCACA 693
Query 220 -------------------------------------------------------------------------- 219
Sbjct 694 CCGTTACCATTCATGCAGGCCTGCAAGAAATTCCTTATCCAGCTTTACAAGGCTGTTACCTCACAGCAGCCACC 767
Query 220 -------------------------------------------------------------------------- 219
Sbjct 768 ACCCTTGCCACTTGAAAGCTATATCCACAATATTCTTTATGAAGTACCCCTTCCACCTCCAGGGAGGTCACTGA 841
Query 220 -------------------------------------------------------------------------- 219
Sbjct 842 AATTTTATGGTGTTTATGAACCTGTCATCTGCCAGAGGCCTGGGCCCAGTGAACTCCCCCTCTCTGATTACCCC 915
Query 220 -------------------------------------------------------------------------- 219
Sbjct 916 CTTCGGGAGGCATTTGAGCTCCTGGGATTAGAGAACCTGGTGCAGGTGTTTACCTGTGTTCTTTTAGAGATGCA 989
Query 220 -------------------------------------------------------------------------- 219
Sbjct 990 AATCCTTCTCTACTCACAAGATTATCAACGCCTGATGACTGTGGCAGAAGGCATCACCACACTTTTGTTCCCAT 1063
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1064 TTCAATGGCAACATGTTTATGTGCCCATTCTACCTGCTTCTCTGCTACATTTTCTTGATGCTCCTGTCCCTTAT 1137
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1138 CTGATGGGCCTTCAGTCAAAAGAAGGAACTGACCGTTCTAAACTAGAACTTCCTCAAGAGGCTAATTTGTGTTT 1211
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1212 TGTGGACATTGACAACCATTTTATTGAGTTGCCTGAAGAATTTCCACAGTTCCCCAATAAAGTGGATTTTATCC 1285
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1286 AAGAACTCTCTGAGGTTCTTGTTCAATTTGGGATCCCTCCTGAGGGCAGCCTACATTGCAGTGAGAGTACCAGC 1359
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1360 AAACTGAAGAATATGGTTCTGAAAGACTTGGTCAATGACAAAAAGAACGGCAATGTCTGTACTAATAACATCAG 1433
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1434 CATGTATGAGTTACTGAAGGGCAATGAAACCATAGCCCGCTTGCAGGCTCTGGCCAAGCGTACTGGTGTGGCTG 1507
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1508 TGGAAAAAATGGACCTCTCTGCTTCTCTGGGTGAAAAAGACAAGGATTTAAAACTGCATTGTGAAGAGGCAGAA 1581
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1582 CTAAGGGACTACCAGCTCAATGTACAGCTCCGAGAGGTCTTTGCTAACCGTTTTACACAGATGTTTGCAGATTA 1655
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1656 CGAAGCATTTGTCATTCAGACTGCCCAGGACATGGAATCCTGGCTGACCAACCGGGAACAGATGCAGAACTTTG 1729
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1730 ACAAAGCTTCCTTTCTGTCTGACCAGCCTGAGCCTTACCTGCCATTTCTTTCACGCTTCATTGAAACACAGATG 1803
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1804 TTTGCCACCTTTATTGATAATAAAATTATGTCTCAGTGGGAAGAGAAAGATCCTTTGCTTCGGGTCTTTGACAC 1877
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1878 TCGGATTGATAAGATAAGGCTGTATAATGTAAGGGCACCCACCTTGCGGACATCTATATATCAGAAATGCAGCA 1951
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1952 CTTTAAAAGAAGCAGCCCAATCAATTGAGCAGAGACTGATGAAAATGGATCACACTGCAATCCACCCACATCTA 2025
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2026 CTTGATATGAAAATTGGTCAAGGCAAATATGAGCAGGGGTTCTTTCCAAAGTTACAGTCCGATGTCTTGGCAAC 2099
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2100 AGGACCAACCAGTAACAATCGCTGGGTAAGTCGGAGTGCCACTGCACAGCGCAGGAAAGAACGCCTTCGCCAGC 2173
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2174 ATTCTGAGCATGTTGGGCTGGACAACGACTTGAGGGAGAAATATATGCAAGAGGCACGAAGTTTAGGAAAAAAC 2247
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2248 CTGAGGCAACCCAAACTGTCAGACCTCTCTCCTGCAGTTATTGCACAGACCAACTGTAAATTCGTAGAAGGCTT 2321
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2322 ATTAAAAGAATGTAGAATGAAGACAAAGCGCATGTTGGTGGAGAAGATGGGACATGAAGCGGTGGAACTTGGCC 2395
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2396 ATGGAGAAGCAAACATCACCGGCCTGGAGGAGAACACCTTGATCGCCAGCCTTTGTGACCTGCTGGAGAGGATA 2469
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2470 TGGAGCCATGGCTTGCAGGTCAAGCAGGGGAAGTCGGCTTTGTGGTCACATTTAATTCAATTTCAGGACAGAGA 2543
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2544 AGAGAAACAAGAGCACCTTGCAGAATCACCAGTTGCCCTCGGACCAGAAAGAAGAAAATCTGACTCAGGAGTTA 2617
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2618 TGTTGCCAACGCTCAGGGTCTCTCTTATTCAGGACATGAGGCATATTCAAAACATGAGTGAGATCAAGACTGAT 2691
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2692 GTTGGACGAGCTCGGGCGTGGATAAGACTGTCTCTAGAAAAGAAGCTCTTGTCCCAGCATCTTAAGCAGTTGCT 2765
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2766 TTCTAACCAACCACTCACCAAGAAGCTTTATAAGCGATATGCTTTTCTACGTTGCGAAGAAGAAAGAGAGCAGT 2839
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2840 TTCTTTACCACCTTCTTTCTCTCAATGCTGTGGACTATTTCTGCTTCACCAGTGTGTTCACCACTATCATGATT 2913
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2914 CCGTATAGGTCAGTGATCATCCCAATCAAAAAGCTGAGCAATGCAATAATCACATCAAACCCTTGGATCTGTGT 2987
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2988 ATCAGGAGAGCTGGGAGACACAGGAGTAATGCAGATTCCCAAAAACCTCCTCGAAATGACCTTTGAGTGCCAGA 3061
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3062 ACTTGGGGAAGCTGACCACTGTTCAGATTGGTCACGATAACTCAGGACTGTTAGCCAAATGGCTAGTGGATTGT 3135
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3136 GTCATGGTCAGAAATGAAATCACAGGACATACATACAGATTCCCATGTGGGCGGTGGCTGGGGAAAGGCATTGA 3209
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3210 TGATGGGAGCCTGGAGAGAATTCTTATTGGAGAGTTGATGACATCAGCATCAGATGAAGATCTAGTAAAGCAGT 3283
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3284 GTCGGACTCCACCCCAGCAGAAGTCACCCACCACGGCTAGGAGATTGAGCATCACTTCACTGACAGGAAAAAAC 3357
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3358 AACAAACCCAATGCTGGGCAGATACAAGAAGGAATTGGAGAAGCTGTGAACAATATTGTGAAACATTTTCATAA 3431
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3432 ACCTGAAAAAGAGAGAGGAAGCCTCACCGTGTTGCTGTGTGGAGAAAATGGCCTGGTTGCAGCCCTTGAGCAAG 3505
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3506 TTTTCCACCATGGGTTCAAATCTGCCCGCATCTTTCACAAGAATGTCTTCATCTGGGACTTCATAGAGAAAGTG 3579
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3580 GTTGCTTATTTTGAAACAACTGACCAGATTCTAGATAATGAAGATGATGTCCTTATTCAGAAATCATCCTGCAA 3653
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3654 AACCTTCTGCCACTACGTAAATGCTATTAATACTGCACCCAGGAACATTGGGAAGGATGGCAAATTCCAGATTT 3727
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3728 TAGTTTGCCTTGGAACAAGGGATCGCCTGCTCCCACAGTGGATTCCATTGTTAGCTGAGTGTCCTGCCATCACT 3801
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3802 CGAATGTATGAAGAGAGCGCTCTCCTGCGAGACCGCATGACTGTCAACTCCCTTATCCGAATTCTGCAGACCAT 3875
Query 220 ---------------------------------------------------- 219
Sbjct 3876 TCAGGACTTCACCATAGTCCTAGAAGGATCACTCATCAAAGGAGTGGATGTG 3927
