Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12783
- Subject:
- NR_023361.2
- Aligned Length:
- 5667
- Identities:
- 187
- Gaps:
- 5453
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCTTTCTGGGAGTAGCCGGTGCTGAGAGAACCGTGGCTGGCAAAGATGATTCAGGCGATTCTGGTTTTCAACAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCATGGGAAGCCACGGCTAGTCCGCTTCTACCAGCGTTTCCCAGAAGAAATTCAACAGCAGATTGTTCGAGAGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTTTCCATCTAGTCCTCAAGCGGGATGACAACATCTGTAACTTCTTGGAGGGTGGAAGTTTGATTGGTGGCTCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GACTACAAACTGATCTACCGGCACTATGCTACCCTCTACTTTGTATTTTGTGTGGATTCCTCAGAGAGTGAACT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGGAATCTTGGACCTCATCCAGCTTAAAAAAAGAGAGAGGAAGAAAAGCCAGTGCAACACCCTACAAACTGGAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CACTAGCTCTTTGGGAACAAGGACCTGACATCAGAACAAGAAGGCTATAAGTTCCCAAACCTTAAAAGTTTTTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGGAAACTCTGGATAAGTGTTTCGAAAATGTGTGTGAATTGGATTTGATCTTCCATATGGATAAGGTGCACTAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ATCCTCCAGGAGGTGGTGATGGGTGGGATGGTGTTGGAAACAAACATGAATGAAATCGTGGCTCAGATTGAGGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCAAAACAGGCTGGAGAAATCCGAGGGTGGCCTTTCAGCAGCCCCTGCGCGGGCTGTGTCTGCTGTGAAAAACA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCAACCTGCCAGAGATTCCTCGGAACATCAACATTGGCGATCTCAACATCAAAGTTCCCAACCTGTCCCAGTTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GTCTGAGGATCAAGTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAGCACGTCTGGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AACAGAACCCATTTTGAGCCTTAGAAGAGTCAAGCCTCAGGACCTGGAAACTTTGTGTCTGGGGAAGACTGTTT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GGCATGGAATAGGGAAGGGATTCCTATTGACACTGCTCGGGTGCACCCAGTTCTCACATGTGCAGTCATGCCGT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TCTCTGATGCATACGGCCACTGCAGATGTGAGGGGCCCTGCCTTCCTCAGTAGGGAGTCAACATGCCCAAGTCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TTTGCACCTTTACCTCTCACATGGATGCTCCCAAGGGTTAGGGACTGCATTGAGCAGGCCCACCTGCTTCCCAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AACCTCCTCACTAGGGCTGAGCACCTTCTCTGAGTAGAGTCTTCATCCTTAGCACCACAGACTTCTGAGGTCCT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GTGCCCTTTACTTGCTGGTGAGGTGTCATAGGTAGAAAAGGGCTGGCCCTTCAGATCTGGGGGTGTGGTGAGTG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GCAAGTAAGGGCAGAATTTTAGGAGAACCAGAGTCACCCGCTGGCTCTACTGAGATTGTTACACCCAGAATCCT 1332
Query 1 --------------------------------ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCAT 42
.||||||||...||||||.|||||.||||||||..|||| |
Sbjct 1333 TTTGTGTTTTTTTGTGGTTTTTTTTTTTTGAGGTGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCTGTGG--T 1404
Query 43 G--ATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGG 114
| ||||||||||||||||||||||||.||.||.|.||||||..||||||||.|||.||||||..|||||||||
Sbjct 1405 GCAATCTCGGCTCACTGCAACCTCTGCTTCCCGGGTTCAAGCATTTCTCCTGTCTCAGCCTCCCCAGTAGCTGG 1478
Query 115 GATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTG 188
||||||||||||.|.|.|||||||||.||||| ||.||||||.|||||||||||..||||||||||||||||
Sbjct 1479 GATTACAGGCACCCACCACCATGCCCAGCTAA---TTGTTGTATGTTTAGTAGAGACAGGGTTTCACCATGTTG 1549
Query 189 GCCAGGCTGGTCTCGAACTCCT-GACCTCAAG------------------------------------------ 219
||||||||||.||||||||||| |||||||||
Sbjct 1550 GCCAGGCTGGGCTCGAACTCCTGGACCTCAAGTGATCTACCCGCCTTGGCCTCCCAAAGTGCTGGCATTACAGG 1623
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1624 TGTGAGCCACCGTGCCCGGCCACCAGAATCCTTTGGTATAGCCAAGCCTTTTGGTTACCGCCTCATGAAGAATA 1697
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1698 TGCTTCCCGCATTGTCCTAGTCCCAGTTGTATTCTCACAGGTGTTATGTGCAGGACACAATCCAAATCATAAAC 1771
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1772 CTGGCTCATGCCCAACACATTTCTGCTAATAGGGAGAGGGACCCACCACACACCCACACATGCCAGAGGTCCCT 1845
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1846 CCTCACAGAGGAGAGGGCCTGTGTCTGTAGAAGGTTAAAGCTGACAACATGTGAAACATCCCAGAATTATGACT 1919
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1920 CTTCCCAAGTTTAAAATACATTCTCCTCATGAGAGCAGAAGGTTTGTTGCTGTGTTGTGAATGATGAGCTGCCT 1993
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1994 CCATAGGGAACCCACTGCCACCTGGGCCAGCTTCTGGAGCATGAGAACCTGAGCCAGGGTCACCCTTGTGGGGC 2067
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2068 CTGGACATGACGCACGCTGGCTGCGACTAGGAGCAGGGCTGCCTCTTCTCCCTCCCCAAGGTCTGCTTGTGGGC 2141
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2142 ACGCTCTGTTCCCTCAGGTGCCATTCTCCCAGGGCTTAGGCGCCCATAAATGTTCTTTCTGTGGTGGAGTAGGG 2215
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2216 CCTCCTGCTTCCATACTGTCGCATGGGCTAGATCTCAGGTGTGGTGTTGAGCCACCTTAAGATGAGGGCTGCTT 2289
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2290 CGCAGTAAAGTTTCCAGCCTGGGCCCCTCTTGGGCCTTCTGGCTGGGGACCCTCAGCCTCCTGATGCTGTTGCA 2363
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2364 GGGCAGGTCTGAGAGGGTGCCCAGCAGCACCCGGTGTCAGGGCCACCTTGTTTTCCATTTTTGAACAGCGCTCC 2437
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2438 CTGTGGTTTGTGCCCACTGCTCAATACAGCCTCCGATCCTCACTCTTGAAAGCTCCATGATAAGCACAGAGATG 2511
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2512 GGCAGTGTGGGTCAGAAGGTGGGCCGCTTCCTGTGGAAGAGGGAAGTGTAGGTGAATAGATATCAAAACCCCTG 2585
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2586 ATGTCATTCTTTTGAGGGGTTGGATTTTCTTTTTTCTGGCAGACATTTCAGTACATTCACATTTCTCTCACATT 2659
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2660 TGCTGAATGTGAGATCAGAATAAAGGAGATCGGCGTTTATTTCGTACCTTCTGTAAGTTGGCATGAGCAAGATC 2733
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2734 ATTCAACTGTCCTTACAACAGGCATTCTTATCCCCATTTTGCAGATGACGAAAGTAGACCCAGCTCCAGTAACC 2807
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2808 TTCCCTTAGATTACACGGGGCTGAGATCTGAGACTGTTCACTTGACTCCACTGTCCTTTTCTTTCCTCGCTGCT 2881
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2882 TAAGATGGCTTCTCCCAATGTTATCATCTTCTTTTTTATAGATAAGGAAACTGAGCCTCAGAGAGTCTGACTTC 2955
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2956 TCACAAACCGTGGTCTAAATAGGCTTGATTTTCTAAGGTGGCCAGTGATCATGTCATAGAGTATAAGAGCCAAA 3029
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3030 GAGTCGTCTGTGTCCCTCCATTTAACTGATGTTGAAGCCGAAGCCCAAGGTGGTAAATGTTATGTTGAGGGTCA 3103
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3104 CAAATCCAGAGCCACATCCCTCTTCTTGAGTTCGTTTGTTACGTGGTTTAATGCATTACTGCAGGACAGCCCTT 3177
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3178 ATGCTAGATTTCCTGGGATAGCCTAGATTTTGAATGTTTTGCCTGCCAGAAACCAATGGTTTTAAAAAATCATT 3251
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3252 GAGTGGTCCTACAGATTCAAAGCGAGCATCCAAACATCCCTCACATGGCCTCTTACAATGACATAAAACTGAAG 3325
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3326 CCCACTTTTTTATTTGGAAAACTCAATCCCTTTGGACAAGCCACAATAATTTTTCATTAACTACTTGAGGTTGC 3399
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3400 CTGCAAATTCAGCTAGCTTTCCAGCCTGCTATCAGCAAAGCCATAAACATCTTTTTTAAAAATAGGTTAAGGTT 3473
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3474 GGCCAGGTGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCAGATCACGAGGTCAGGA 3547
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3548 GATCGAGACCATCCTAGCTAACACAGTGAAAACCCATCTCTACTAAAAATACAAAAAATTGGCCAGCCGTGGTA 3621
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3622 GTGGACACCTGTAGTCCCAGCTACTCAGGAGGCTGCGGCAGGAGAATGGCATGAACCCGGGAGGCAGAGCTTGC 3695
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3696 AGTGAGCCAAGATCGCACCACTACACTCCAGCCTGGGCAACACAGCAAGACTCCGTCTCAAAAAAAAAAAAAAA 3769
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3770 AAAAATAGGTTAAGGTTGTATAGAATACTAGGCTTTCCTTTTTTTGTGAGATGGGGGTCTCACACTGTGGCTCA 3843
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3844 GGCTGGAGTGCAGTGGTGTGATCATGGCTCACTGCAGCCTCGAAGCCCCGGGGTCAAGTGATCCTCTCACCTCA 3917
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3918 GCCTCCTAGGTAGCTGGAACCACAGGCACGCAACCACCACTCCTGGCTAGTTTTATTTTTTTAGTAGAATAAGG 3991
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3992 TCTCACTATGTTGCACAGGCTGGTCTCTAACTCCTTACCTCAAGCCATCCTCCCGCCTTGGCCTCCCAAACATG 4065
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4066 TTGGGATTACAGGTGTGAGCCACTGGACCTGGCCAAATACTGGGTTTTCAGTGCTCACTGCCACTAATAAAAAT 4139
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4140 CTGAAATTCTTTCATTATGCAATTTCTAAGTGCCTGGTGAGGGCCAAGCTCAGTTCTAGGCTCTGAAGATTAAG 4213
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4214 AGAGAAACAAGGCTCTGTCTGCTCCTGTTGTCTCTGTGAGCATCTTTGACAGAGTGCTCAGATTGTTGGGATAT 4287
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4288 AGTGCATCGGACTGGCAGCCTGAATTTGTGGAGACCGCAGTCAGTAACTTTGTGATATATGGAATATTTAGAGG 4361
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4362 ACAGTAACCCATTTCCCTACGCCCTACCTGATCACATCGTGCCCTGCTGGGCCATACCCCAAACAGCCCACCTT 4435
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4436 CCTCTAGGCCTGGCCATGGCCCTGTGCCTGCCACATTGAGGATTAAGTCAGGATATCTTGAGCCCTCTCAAATC 4509
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4510 CCTGTTTATTCAGGCCTCTGCCACATATAGAGCCAGCCTTCTGTCCCCACCACTTCCACTACCATGGAGCCCAC 4583
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4584 TTAGTAAAACGCTCTCTGGGCCCAGCTTCGCCAGAAAAGACACCAGGGGAGCAAGGCTCAAACCAGGGGCAGCT 4657
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4658 AAATCTGATCTTGTGGACCAGTCTCTAGTAAGGGCTTTCAGCGTGGCTGTCTGTCCATTGCTTTCCAAATAGGA 4731
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4732 TGCAGCAATGATTGGTACATGGGTATTAAGATCGGTAGTAGGGGCTAGTCCAAGTTTAGCAATAGCCAAACTGG 4805
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4806 AGAGCCTCTGAAGTATGAGAGTCCCAGAGGGATTTGTCAGCTCCTGGCAGACATCCTGATTTTCACCTTCCTGA 4879
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4880 GTCTACCCTACCCCAGAGGGTGCCAGTCTCACTGTGGTGATGGTTAGCCCAGTGTGTGCTGCACTCACACACCA 4953
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4954 GCACGGGGTCCGTGCTTGCAGGCTGGTGGATGCTGTCCTCTGGGTTAAGACTGTCTCCCTTCTCGGGAGCACTG 5027
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5028 GAGGGTTCTCCATCTGCGTGTTTCAGTGGAAGTTGGCAGATACGAAAACAGGCCCCTATAGGGAAGCAGTTCCA 5101
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5102 TGAAAATGATTAATTCTTTCCAAAAGACTTAAAATTTTTTCCTATTTCAATTTTCCTTTCAAAAAAGGAAATAC 5175
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5176 ATTCATGTAGTTCAAAACTTAAGAAAACAAAAGTCTGTTCAGCAAAAGACTCCCACTCCGGTTCCCCAAACGCT 5249
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5250 GAGCCCCACCCCCCATCCCTGGTAGCAAGAAGTGTTTCCAATTTTAAGGTTAAGAAACAAAGTCCCTGGATTTG 5323
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5324 TGTTAGGGATGTCTTCCTGAGAGTGGGTTGTGTTCCGTTTGACCCTGGCGGTTGACCTCGGCCCACTAGGATCA 5397
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5398 TGCCGCCCTCTCCAGGGAGGAGGGCCTCCCCATCACCCTGTACAGTGGCACCCCAGCCCTGGCACTGCCCGCCC 5471
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5472 TTGCTCAGCGTACCTTTCCCATGGCACTCTGACGTACTGGATGTTTGGTTTCTGAAGTTACTGGCTGTTTACCC 5545
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5546 TGCCGGGATGTAAGCCCCTCCAGGGCAGGGGCTTGTCTCGTGTTCAGTGCTGCATCCCAGCTGCTGGGCACGGT 5619
Query 220 ------------------------------------------- 219
Sbjct 5620 ACCTGGTCCATGGCGTTCAATAAATAACTGTTGGATGAGTGAA 5662
