Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12783
Subject:
NR_023361.2
Aligned Length:
5667
Identities:
187
Gaps:
5453

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCTTTCTGGGAGTAGCCGGTGCTGAGAGAACCGTGGCTGGCAAAGATGATTCAGGCGATTCTGGTTTTCAACAA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCATGGGAAGCCACGGCTAGTCCGCTTCTACCAGCGTTTCCCAGAAGAAATTCAACAGCAGATTGTTCGAGAGA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CTTTCCATCTAGTCCTCAAGCGGGATGACAACATCTGTAACTTCTTGGAGGGTGGAAGTTTGATTGGTGGCTCT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GACTACAAACTGATCTACCGGCACTATGCTACCCTCTACTTTGTATTTTGTGTGGATTCCTCAGAGAGTGAACT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TGGAATCTTGGACCTCATCCAGCTTAAAAAAAGAGAGAGGAAGAAAAGCCAGTGCAACACCCTACAAACTGGAA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CACTAGCTCTTTGGGAACAAGGACCTGACATCAGAACAAGAAGGCTATAAGTTCCCAAACCTTAAAAGTTTTTG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TGGAAACTCTGGATAAGTGTTTCGAAAATGTGTGTGAATTGGATTTGATCTTCCATATGGATAAGGTGCACTAC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  ATCCTCCAGGAGGTGGTGATGGGTGGGATGGTGTTGGAAACAAACATGAATGAAATCGTGGCTCAGATTGAGGC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TCAAAACAGGCTGGAGAAATCCGAGGGTGGCCTTTCAGCAGCCCCTGCGCGGGCTGTGTCTGCTGTGAAAAACA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TCAACCTGCCAGAGATTCCTCGGAACATCAACATTGGCGATCTCAACATCAAAGTTCCCAACCTGTCCCAGTTT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GTCTGAGGATCAAGTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAGCACGTCTGGA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  AACAGAACCCATTTTGAGCCTTAGAAGAGTCAAGCCTCAGGACCTGGAAACTTTGTGTCTGGGGAAGACTGTTT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GGCATGGAATAGGGAAGGGATTCCTATTGACACTGCTCGGGTGCACCCAGTTCTCACATGTGCAGTCATGCCGT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TCTCTGATGCATACGGCCACTGCAGATGTGAGGGGCCCTGCCTTCCTCAGTAGGGAGTCAACATGCCCAAGTCA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TTTGCACCTTTACCTCTCACATGGATGCTCCCAAGGGTTAGGGACTGCATTGAGCAGGCCCACCTGCTTCCCAG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  AACCTCCTCACTAGGGCTGAGCACCTTCTCTGAGTAGAGTCTTCATCCTTAGCACCACAGACTTCTGAGGTCCT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GTGCCCTTTACTTGCTGGTGAGGTGTCATAGGTAGAAAAGGGCTGGCCCTTCAGATCTGGGGGTGTGGTGAGTG  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GCAAGTAAGGGCAGAATTTTAGGAGAACCAGAGTCACCCGCTGGCTCTACTGAGATTGTTACACCCAGAATCCT  1332

Query    1  --------------------------------ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCAT  42
                                            .||||||||...||||||.|||||.||||||||..||||  |
Sbjct 1333  TTTGTGTTTTTTTGTGGTTTTTTTTTTTTGAGGTGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCTGTGG--T  1404

Query   43  G--ATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGG  114
            |  ||||||||||||||||||||||||.||.||.|.||||||..||||||||.|||.||||||..|||||||||
Sbjct 1405  GCAATCTCGGCTCACTGCAACCTCTGCTTCCCGGGTTCAAGCATTTCTCCTGTCTCAGCCTCCCCAGTAGCTGG  1478

Query  115  GATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTG  188
            ||||||||||||.|.|.|||||||||.|||||   ||.||||||.|||||||||||..||||||||||||||||
Sbjct 1479  GATTACAGGCACCCACCACCATGCCCAGCTAA---TTGTTGTATGTTTAGTAGAGACAGGGTTTCACCATGTTG  1549

Query  189  GCCAGGCTGGTCTCGAACTCCT-GACCTCAAG------------------------------------------  219
            ||||||||||.||||||||||| |||||||||                                          
Sbjct 1550  GCCAGGCTGGGCTCGAACTCCTGGACCTCAAGTGATCTACCCGCCTTGGCCTCCCAAAGTGCTGGCATTACAGG  1623

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1624  TGTGAGCCACCGTGCCCGGCCACCAGAATCCTTTGGTATAGCCAAGCCTTTTGGTTACCGCCTCATGAAGAATA  1697

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1698  TGCTTCCCGCATTGTCCTAGTCCCAGTTGTATTCTCACAGGTGTTATGTGCAGGACACAATCCAAATCATAAAC  1771

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1772  CTGGCTCATGCCCAACACATTTCTGCTAATAGGGAGAGGGACCCACCACACACCCACACATGCCAGAGGTCCCT  1845

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1846  CCTCACAGAGGAGAGGGCCTGTGTCTGTAGAAGGTTAAAGCTGACAACATGTGAAACATCCCAGAATTATGACT  1919

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1920  CTTCCCAAGTTTAAAATACATTCTCCTCATGAGAGCAGAAGGTTTGTTGCTGTGTTGTGAATGATGAGCTGCCT  1993

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1994  CCATAGGGAACCCACTGCCACCTGGGCCAGCTTCTGGAGCATGAGAACCTGAGCCAGGGTCACCCTTGTGGGGC  2067

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2068  CTGGACATGACGCACGCTGGCTGCGACTAGGAGCAGGGCTGCCTCTTCTCCCTCCCCAAGGTCTGCTTGTGGGC  2141

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2142  ACGCTCTGTTCCCTCAGGTGCCATTCTCCCAGGGCTTAGGCGCCCATAAATGTTCTTTCTGTGGTGGAGTAGGG  2215

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2216  CCTCCTGCTTCCATACTGTCGCATGGGCTAGATCTCAGGTGTGGTGTTGAGCCACCTTAAGATGAGGGCTGCTT  2289

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2290  CGCAGTAAAGTTTCCAGCCTGGGCCCCTCTTGGGCCTTCTGGCTGGGGACCCTCAGCCTCCTGATGCTGTTGCA  2363

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2364  GGGCAGGTCTGAGAGGGTGCCCAGCAGCACCCGGTGTCAGGGCCACCTTGTTTTCCATTTTTGAACAGCGCTCC  2437

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2438  CTGTGGTTTGTGCCCACTGCTCAATACAGCCTCCGATCCTCACTCTTGAAAGCTCCATGATAAGCACAGAGATG  2511

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2512  GGCAGTGTGGGTCAGAAGGTGGGCCGCTTCCTGTGGAAGAGGGAAGTGTAGGTGAATAGATATCAAAACCCCTG  2585

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2586  ATGTCATTCTTTTGAGGGGTTGGATTTTCTTTTTTCTGGCAGACATTTCAGTACATTCACATTTCTCTCACATT  2659

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2660  TGCTGAATGTGAGATCAGAATAAAGGAGATCGGCGTTTATTTCGTACCTTCTGTAAGTTGGCATGAGCAAGATC  2733

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2734  ATTCAACTGTCCTTACAACAGGCATTCTTATCCCCATTTTGCAGATGACGAAAGTAGACCCAGCTCCAGTAACC  2807

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2808  TTCCCTTAGATTACACGGGGCTGAGATCTGAGACTGTTCACTTGACTCCACTGTCCTTTTCTTTCCTCGCTGCT  2881

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2882  TAAGATGGCTTCTCCCAATGTTATCATCTTCTTTTTTATAGATAAGGAAACTGAGCCTCAGAGAGTCTGACTTC  2955

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2956  TCACAAACCGTGGTCTAAATAGGCTTGATTTTCTAAGGTGGCCAGTGATCATGTCATAGAGTATAAGAGCCAAA  3029

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3030  GAGTCGTCTGTGTCCCTCCATTTAACTGATGTTGAAGCCGAAGCCCAAGGTGGTAAATGTTATGTTGAGGGTCA  3103

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3104  CAAATCCAGAGCCACATCCCTCTTCTTGAGTTCGTTTGTTACGTGGTTTAATGCATTACTGCAGGACAGCCCTT  3177

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3178  ATGCTAGATTTCCTGGGATAGCCTAGATTTTGAATGTTTTGCCTGCCAGAAACCAATGGTTTTAAAAAATCATT  3251

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3252  GAGTGGTCCTACAGATTCAAAGCGAGCATCCAAACATCCCTCACATGGCCTCTTACAATGACATAAAACTGAAG  3325

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3326  CCCACTTTTTTATTTGGAAAACTCAATCCCTTTGGACAAGCCACAATAATTTTTCATTAACTACTTGAGGTTGC  3399

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3400  CTGCAAATTCAGCTAGCTTTCCAGCCTGCTATCAGCAAAGCCATAAACATCTTTTTTAAAAATAGGTTAAGGTT  3473

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3474  GGCCAGGTGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCAGATCACGAGGTCAGGA  3547

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3548  GATCGAGACCATCCTAGCTAACACAGTGAAAACCCATCTCTACTAAAAATACAAAAAATTGGCCAGCCGTGGTA  3621

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3622  GTGGACACCTGTAGTCCCAGCTACTCAGGAGGCTGCGGCAGGAGAATGGCATGAACCCGGGAGGCAGAGCTTGC  3695

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3696  AGTGAGCCAAGATCGCACCACTACACTCCAGCCTGGGCAACACAGCAAGACTCCGTCTCAAAAAAAAAAAAAAA  3769

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3770  AAAAATAGGTTAAGGTTGTATAGAATACTAGGCTTTCCTTTTTTTGTGAGATGGGGGTCTCACACTGTGGCTCA  3843

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3844  GGCTGGAGTGCAGTGGTGTGATCATGGCTCACTGCAGCCTCGAAGCCCCGGGGTCAAGTGATCCTCTCACCTCA  3917

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3918  GCCTCCTAGGTAGCTGGAACCACAGGCACGCAACCACCACTCCTGGCTAGTTTTATTTTTTTAGTAGAATAAGG  3991

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3992  TCTCACTATGTTGCACAGGCTGGTCTCTAACTCCTTACCTCAAGCCATCCTCCCGCCTTGGCCTCCCAAACATG  4065

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4066  TTGGGATTACAGGTGTGAGCCACTGGACCTGGCCAAATACTGGGTTTTCAGTGCTCACTGCCACTAATAAAAAT  4139

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4140  CTGAAATTCTTTCATTATGCAATTTCTAAGTGCCTGGTGAGGGCCAAGCTCAGTTCTAGGCTCTGAAGATTAAG  4213

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4214  AGAGAAACAAGGCTCTGTCTGCTCCTGTTGTCTCTGTGAGCATCTTTGACAGAGTGCTCAGATTGTTGGGATAT  4287

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4288  AGTGCATCGGACTGGCAGCCTGAATTTGTGGAGACCGCAGTCAGTAACTTTGTGATATATGGAATATTTAGAGG  4361

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4362  ACAGTAACCCATTTCCCTACGCCCTACCTGATCACATCGTGCCCTGCTGGGCCATACCCCAAACAGCCCACCTT  4435

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4436  CCTCTAGGCCTGGCCATGGCCCTGTGCCTGCCACATTGAGGATTAAGTCAGGATATCTTGAGCCCTCTCAAATC  4509

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4510  CCTGTTTATTCAGGCCTCTGCCACATATAGAGCCAGCCTTCTGTCCCCACCACTTCCACTACCATGGAGCCCAC  4583

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4584  TTAGTAAAACGCTCTCTGGGCCCAGCTTCGCCAGAAAAGACACCAGGGGAGCAAGGCTCAAACCAGGGGCAGCT  4657

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4658  AAATCTGATCTTGTGGACCAGTCTCTAGTAAGGGCTTTCAGCGTGGCTGTCTGTCCATTGCTTTCCAAATAGGA  4731

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4732  TGCAGCAATGATTGGTACATGGGTATTAAGATCGGTAGTAGGGGCTAGTCCAAGTTTAGCAATAGCCAAACTGG  4805

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4806  AGAGCCTCTGAAGTATGAGAGTCCCAGAGGGATTTGTCAGCTCCTGGCAGACATCCTGATTTTCACCTTCCTGA  4879

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4880  GTCTACCCTACCCCAGAGGGTGCCAGTCTCACTGTGGTGATGGTTAGCCCAGTGTGTGCTGCACTCACACACCA  4953

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4954  GCACGGGGTCCGTGCTTGCAGGCTGGTGGATGCTGTCCTCTGGGTTAAGACTGTCTCCCTTCTCGGGAGCACTG  5027

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 5028  GAGGGTTCTCCATCTGCGTGTTTCAGTGGAAGTTGGCAGATACGAAAACAGGCCCCTATAGGGAAGCAGTTCCA  5101

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 5102  TGAAAATGATTAATTCTTTCCAAAAGACTTAAAATTTTTTCCTATTTCAATTTTCCTTTCAAAAAAGGAAATAC  5175

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 5176  ATTCATGTAGTTCAAAACTTAAGAAAACAAAAGTCTGTTCAGCAAAAGACTCCCACTCCGGTTCCCCAAACGCT  5249

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 5250  GAGCCCCACCCCCCATCCCTGGTAGCAAGAAGTGTTTCCAATTTTAAGGTTAAGAAACAAAGTCCCTGGATTTG  5323

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 5324  TGTTAGGGATGTCTTCCTGAGAGTGGGTTGTGTTCCGTTTGACCCTGGCGGTTGACCTCGGCCCACTAGGATCA  5397

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 5398  TGCCGCCCTCTCCAGGGAGGAGGGCCTCCCCATCACCCTGTACAGTGGCACCCCAGCCCTGGCACTGCCCGCCC  5471

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 5472  TTGCTCAGCGTACCTTTCCCATGGCACTCTGACGTACTGGATGTTTGGTTTCTGAAGTTACTGGCTGTTTACCC  5545

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 5546  TGCCGGGATGTAAGCCCCTCCAGGGCAGGGGCTTGTCTCGTGTTCAGTGCTGCATCCCAGCTGCTGGGCACGGT  5619

Query  220  -------------------------------------------  219
                                                       
Sbjct 5620  ACCTGGTCCATGGCGTTCAATAAATAACTGTTGGATGAGTGAA  5662

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