Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12783
- Subject:
- NR_033374.1
- Aligned Length:
- 3848
- Identities:
- 187
- Gaps:
- 3635
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATTCTCCATCCCTGCATTCCTCCATCGCAGCATCCCTGCATGCCTCCGTTCTCTGCATCCCTCCACCCCAGTAT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCCTGCACCTCTTCATCCCTCCATTCCTGCATCCCTCTATTTTTCCATCCCTCCATTCCTGTATCCCTGTGCCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCCATCCTCCATCCCAGCATCCCTCCATCCCTGCTCCCCACTCTCACTTCCCTTCCCTTCACAGACAGGCTTTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCTGCCATCCTCAGACCCCACCCAGGGTTACCTGATGCCTTTCCAGCTGCACACGGGGACTGACTCACCTCTCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTTTCTCAGTCCCAAAGTCCCGAAAGAGAGCATCTGATGTGGTCAGCTTGTGACAAGGCGTCCACCTTCTGTCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATGACATGGAGGCCAGGGGAAGGTCTCACTGCCCAGCACCCCACCCTGTGCTCCCAGGCCTTTTGAATGTTCCT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCTGCTCAGCCCAGTGACTGCGGGCTGTGGCTCCTCCTCCAGCCTCCCCTCGAGGTCCTGGTCTTACTTAGGAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCCCCGGGTGTAGATGCCTTCCCACCCACCAGGCATTGCCCCTTTTCCTGGCTTCACAGACTCGGGAATAAAGT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTCCTTCTGTTTCCCCTCTTGCAGAAGGAGATCCGGTTGGCAGCTAAACCGCGCTGGGAACAGGGGCCTGAGTC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTGGACTAGGGCTCTTTCCCCGGGGCTGCTGCAGATGGGGAGGAGCCTACACCCGCCTCCCGAGTGCTAATCAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACCTGACAGGCTGGAGAATGGCCAGTCAGCCTGAGGCCACCGCGGGACACCACCTAGGCCCAGCTTCTCCCCCC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ACCAGAGGGCGCCAGAGCCCGCCAAGCCTCGTAGGAGATGGCAACAGGGCCTGCTGCTGCCACCTAGCGGCCAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTCCGGGAATGAATCTCGGCACGCTCATTACCCAGCGACTCTGCCCATCTTGACCCTTTATGTGAAGCAGAACA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GCCGCTTCCGCAGTGAGCTGTCAGAAGGCGTCGTGCCTGTCTTGCTAGTGGGGAAACTGAGGCTCAGAGAGGCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GAAGACTTGCCCAAGATCACACCACCGGGACCCAGGATTCAAGCGCAGGCCTGCCCAGGCTCTCTGTGGCCTCC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TGGCTGCGAGGAGGCAGCCAGGGACCAGGTGCCACCCTTCTGAGACACCTGAGATCCCAGGCCCGAGAGGATGA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AGGCGGGATTACCTGGAGCGTGTCTGAATGCTGGAGGAAGAAGGGCAGCTGGGAGATGAAGCTGTCAGGATGGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCGCATCCCATTTCCTGCCTCGTTTCAGTTCAACTTTCCAACAGACCTCCCTGGCTCGTCTTGCTCTTCTCTAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGGACAAACAAACAGGCTCAGAGAGGTGGTGTGACTTGCCCAAGGTCACTCAGCTTGGATGCTATGGAACAGGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ACGTCCACTGTCCCAGTCTGTTTATGGGAAGCCGCTCTGCAACTGTCCTGACCCACCACATGCCCCACCGCTGT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TTCTCTTGCCCTGACCCCTTGTTCCCTGGACCAGGGTGGCACAGCTCCAGGCTCTTGGGCCCTTCCCGAGGGCA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GGCACCTGTGACTGTGTCCCCAAAGACCTGAGTGGCTGAGGGGGCCCCACAGAGCTTGGACTTCCTGGAGGACA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AGGAGGGGTCTGCCAGCCACCCCCACCACGCCCGCCCCAGGGCTCCCCTGGAGCTTCCATGCCAGCCGGACTCA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GGTGGGTCTGGAGGAGCACCGTGCCTCCAATCAGACCTTGAGATGTGCCCCCTGCCCCCACTGTGCCCTCCCCT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GCCCAGGAGTCTGGTTGCAAACCCTGATTAAGGGGATTTTATCTCCACCAGAGGGCCAGTAGGTGGGAAGTAGC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TTAAACAATGCAGGTTTATAATCTCACAGTTCTGGAGGTCAAGAGTCTGAAATGGGCCTCATGGGGCTAAAACC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AAGGTGTCTGCAGGGCTGTGTTCCTTCTGGAGGCTCCAGGGCAGGAAGGGGAGGATCCACTTCTGTGCCTTTCC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AGCTTCTAGAGGCTGCCTGCGTTCCTTGGCTCGTGGCCCCTTCCTCCACCTTCAAGCCAGCAGCGGAGGCCTGA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GTCCTTCTCATGCCATCTCTCTGTTCTCTCTCCTGCCTCCTCCTCCACACTGAAGGACCCCTGTGATCACACTG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GCCCCCCCACCGGATGACCCAGGATAATCCATCTCCCTGTTTGAAGGTCGGCTGATTAGCAACCTTCATTCCAT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CTGCCTCCTTCATTCCCCCTGGCCATGTAATGGGATTCACAGCTTCTGGGGATTAGGACATGGACATCTTGTGG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CGGGGGCATAATTCTGTCGACGACACCAAGAAACACTTGGATGTTAAGGATTCACCGAACACTGTTCAGGCTGA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GGCAGGAGAATTGCTTGAACCTGGGAGGCAGAGGTTGCAGTGAGCCGAGATCATACCATTGCACTCCAGCCTGG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GCAACAAGAGTGAACCTCCATCACAAAAAACAAACAACAAAAAAAATCAGGTATAATTACATACAGTGAAACAT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 ATGGTGACTCAAGTACACAGTTCAGTGTTTTTTTTGTTTTTGTTTTTTTTTAAGATGGACTCTTGCTCTGTCGC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CCAGGCTGGAGTTCAGTGGCGCGATCTTGGCTCACTGCAACCTCTGTCTTCCAGGTTCAAGCAATTCTGCCTCA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GCCTCCCAAGTAGCTGGGACTACAAGTGCACGCCACCATGCCTGGCTAATTTTTGTATTTTTAATAGAGATGGG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GTTTTTTTTTCTTTCTTTTTTTTTTTTTTTGAGACAGGGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGTCA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CAATCTCGGCTCACTGCAACCTCTGCCTCTTGGGTTCAAGCAATTCTTCTGCCTCAGCCTCCTGAGTAGCTGGT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 AGCTGGGACTATAGGCACGTGCCACCACACCCAGTTAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCGG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GTTAGCCAGGATGGTCTCAATCTCTTGACCTCGTGATCTGCCCGTTTTGGTCTCCCAAAGTGATGGGATTACAG 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 GCGTGAGCCACCGCGCCAGGCTGAGATGGGGTTTCACCACGTTGGCCAGGCTGGTCTGGAACTCCTGACCTCAG 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 GTGATCCGCCTGCCTTGGACTCCCAAAGTGCTGGGATTACAGACGTGAGCCACCGTGCCCGGCCAGTTCTATGA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 GTTTTGATGAATGTGTCCTGCTTCTTCCCAGGCTCCACCATCTCTTCCCCTAAAGGCAACCACCATTCTGATTT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 CTCTCACCAAAGACTGGAAAAATATCCCAATACCTGGATGTATGCCTCACGTGTCCCGCTGGCCCCAGCACCCA 3330
Query 1 -------------------------------------------------------------------ATGGAGT 7
|| |||
Sbjct 3331 GGTATAGTTAGTTACTGCTGTGCCTGGCTTCACTCTCACTTTTTTTTTTTTTTTCTTTTTTTGAGACAT--AGT 3402
Query 8 CTCATTCTGTCGCCCAGACTGGAGTGAA--GTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGG-TC 78
|||..|||||.||||||.||||||||.| ||||||..|||||.||||||||||||||...|||| |.||| ||
Sbjct 3403 CTCGCTCTGTAGCCCAGGCTGGAGTGCAGTGTGGCACAATCTCAGCTCACTGCAACCTTCACCTC-CCAGGTTC 3475
Query 79 AAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTT 152
||||||||||||||||||.|||||..|||||||||.||.||||||..|.|.|.||||..||.|||||| |||
Sbjct 3476 AAGCGATTCTCCTGCCTCAGCCTCTCGAGTAGCTGCGACTACAGGTGCCCACCACCACACCTGGCTAA---TTT 3546
Query 153 TTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG------- 219
||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct 3547 TTGTATTTTTAGTAGAGATGGGGTTTCACCTTGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGTGATCCA 3620
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3621 CCTGCCTCAGCCTCCCAAGGTGCTGGGATTGCAGGCCGGCCTTACCTGGTATGGTTTTTAGGTTCATGTTGATG 3694
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3695 CCTGGAGTTTCAGTAATTCCCTCCCATTCGTTGCTGAGTAGCACTGCAACACATGCAGGCAGCTATTTGGGGAT 3768
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3769 CTTTTCACCTGTTGATGGGTGTCTGGACTGTTTCCAGTTTTTGGCTGTTACAAATGAAGCCTCTGTGAGCCACG 3842
