Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12783
- Subject:
- NR_046702.1
- Aligned Length:
- 3107
- Identities:
- 192
- Gaps:
- 2894
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATTTTGATCTCAGCATGTGCTGATGGAGTAATGAAATAAAGACAACACTCTGCAAATGGCTGGATACATTAAGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAGAAGCAACTTGTAAAGCACCCAGGAAAATATCTGACACATTGAAGATGGCAGGATCTGCCTCAGGGATCTGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCAAGCAACGTGGGATCCCCACTTTTTCACTCTGCTGAATACTCGACCATATTACAAGGCAACAACTGTTCTAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCTGGAACTAGAGCATGAACTGGAATGAGGAAGGACCAGTAAGGCAAAGTGAAACACCCAAACCACCAGCATGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCCCATCCAGAATGGTACCTGTTCAGGCTTCAGACCCGGCGGGACCCAGGCATACTCTTCCAAAGCACAGCCTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGTCATCATCTGAGGTCGAGTTCCTCTGAAAGTCAAACATGAGTTTGCTGATGGTCTTCTCCATCTCCAGCGGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATCACTGTCACCATGTGCTCCTCCTGGGGACACTTGCAGTGCAGGCAGATCTTCCTGCAGGCAGTAAAGGTAGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGGTGAGAAAGAGGAAAAAACCTTTTTTTTTTTCCAAGAGCCTGCCAGTCACTAGCCCCTGGATCCCAAACCAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AAACACATTCCTTGGCAATGGGCATCGGGCAAAGGCATCGCGAGCAGTGTTCCAGAACATGACTGTCTTTGCAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGGGCGTGGTACACGCATGTGAAAACAGCATGAAAGGTCAGAGGCCACCAGGTAAGCATGCTAAGGGTGTTTAC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ATGTGGACCCCAGCCTTCTCTTCTAAATCAATACCCCAAGAGGAATGGTAATATAGTTTTTATTTTACTAGGTA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GACCACTGGATATGGCCCATGACCACAATTTCCTTGACTGCAATAGCAATTAAATATACATAATACATATGTTG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ACCTGAAGTGTTACTTGTAGATTTAACAAATACTGACAACATACTGCTTTTATAAAAGGTTCCTAAGCCCTGGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AAATGGAGAAAATGGTTTTAAAAATGCAGGTAAAATGTTCTTTAAGAAGAAGAGCAAACATACATATTTTTTCT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CATGAAACGTATCTGGCCCTAAGATCTCATAGGAAAGACAATTTCACCTCCATTAAAGATCCCTGTAGGTTTGG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AATTCTAATTAGAAACCCAAATTTTCCCTATGTTGGTGGGGTTTTTTATATACAAGAAGATCATGCATGTGAAT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TATTTCAAAAGGTAGCAGCCAAAGATAAAAATCTCCCAAACTGAACATTTCTCTTTTAAGGTTACCATCTGTTC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCTTATCCATAGCTACAGAAATGATGAAGCAATAAATATGTTGATGTCAGCAACACAAAAGCATTTCTAGCTTC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CACCAATAAAATAAAAAGAGAGAAAAAAAGAATAGAGGAGGAAAATTTTAAGGAAATAAGTTATTCCATGTTCA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CTCTTTTTAAAATTATTAGTTTCCGTAGCACCTTATAAAGGTGATAAAAGAGCCCAGAATTTTAATCCCCAGAT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GTGCCTGAACGTTCTGATAACAGCTTTGTGAAGATACAATGTACAAACCATAAAACTCACCATTTCAAAGTGTA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CAATTCATGGACTCTTAATACATTCGGAATTGTGAATCATCACTATCTAATTTTCATCCCCTCCCCAAAAGAAA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CCCCAGGAGCATTGGCAGTTATTTCCCATATCCCTCTGCCCCCAGGCTCTAACAACCACTAATCTATTTTCTGT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CTCTATGGTTTTGCCTATTTTGGACATTTCATATAAATGCAATCATATAATATGTGGTTCTTTTGAAGTTGGCT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TCTTTCACACAGAATGACTTTTCAAGGTTAATCCAAGTTATAGCATGTATCAATCCTTCATCCCCTTTTATTGT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TGAATAATATGCCATTGTATAGATATACCACATTTTCATTGATCAGTTGTGCACATTTGGACTATTTTCACCTA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TGGCTTTTATGAATAATGATGCTCTGATTACTTATGTATAATTTTTTGTGTGGATATTTGTTTTGTTTTGTTTT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GTTTTTTGAGACAGGTTCTCATTGTTTCCCAGGATGGAGTGCAGTGATGCAATCACGGCTCACAGCAGCCTTGA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CCTCCTGGGCTCAAGCGATCCTCCTGTCTTAGCCTCCCAAGTAGCTGGGACCACACAGGGGCATGCCACCACGC 2146
Query 1 ---------------------ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATG--ATCTCGGC 51
|..||||||||.||||||||||||.||||||||.||||| || |||||.||
Sbjct 2147 CTGGCTTTTTTTTTTTCTGAGACAGAGTCTCACTCTGTCGCCCAGGCTGGAGTGCAGTGG--TGCCATCTCAGC 2218
Query 52 TCACTGCAACCTCT-GCCTCTCGAGG-TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGG 123
|||||||||||||| |||.| |.||| ||||||.||||||||||||.|||||||.||||||||||||.||||||
Sbjct 2219 TCACTGCAACCTCTGGCCGC-CCAGGTTCAAGCAATTCTCCTGCCTTGGCCTCCTGAGTAGCTGGGACTACAGG 2291
Query 124 CACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTG 197
||..|.|.||||.||||.||||| |||||||||||||||||||||.||||||||||||||||||||||||||
Sbjct 2292 CATGCACCACCACGCCCAGCTAA---TTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTG 2362
Query 198 GTCTCGAACTCCTGACCTCAAG---------------------------------------------------- 219
||||.|||||||||||||||.|
Sbjct 2363 GTCTTGAACTCCTGACCTCATGATCCACCCGCGTCAGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACTG 2436
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2437 CCCTCAGTCGGATATATGTTTTTAATTTTTTTTTTTTTTTTTGAGATGGAGTCTTGCTCTGTCGCCCAGACTGG 2510
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2511 AGTGCAGTGGCACGATCTCGGCTCACTGCAAGCTCCACCTCCTGGGTTCGTGCCATTCTCATGCCTCAGCCTCC 2584
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2585 CGAGTAGCTGGGACTACAGGTGCCTGCCACCATGCCTAGCTAATTTTTTGTATTTTTAGTAGAGACCGGGTTTC 2658
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2659 ACCATATTAGCCAGGATGGTCTTGATCTCCTGACCTCGTGATCCGCCTGCCTCGGCCTCCCAAAGTGCTAGGAT 2732
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2733 TACAGGCATGAGCCACCACGCCTGGCCAAAGTTTTTAATTCTTTTGGGTATATTCCTAGAAATGAAATTGCTAG 2806
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2807 GTCATGTGGCAACTTTAGATTTAACATTTTGAGGAACTCCCAAATTGTTTTCACAAAATATCTGTACCTTTGTA 2880
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2881 CATTCCCACCACTGATGAATGAGTGTTCCATTTTCTCCATATTCTTGTCACATTTGTTATTGTCTGTCTTCTTT 2954
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2955 TATTGTAGCTACTATAGTGGGTATAAAACAGTATTTAATTGTGGTTTTGATTTGCATTTCCCTAACGTCTAATG 3028
Query 220 ------------------------------------------------------------------------- 219
Sbjct 3029 ATGTTGAATATCTTTTTATGTGCTTATTATGTATCTTCTTAGAATAGAGACATGTCTATACAAAAAAAAAAAA 3101
