Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12783
- Subject:
- NR_073037.2
- Aligned Length:
- 3276
- Identities:
- 192
- Gaps:
- 3058
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCATTCCCGGCGGCTCCGGGTTTGGCAACGAGGACGGGGGAGTGCGACTGCGTCTCGGGCAGCATGGCCGAGAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCGGCACACACGGGACTCCGAAGCCCAGCGGCTCCCCGACTCCTTCAAGGAAACTTGAACTCCAAGCATTTGGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTCACATTTCAGAAGATTATCCTTGAAGATACAACCAATAAAGTCCTAAAGTCTCAGACAATGAAAACTATACT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAACTTGTGGTCCAGTTAAAGTGAGCACTATGACAGCCCCAGTAAGGGCCTTGGACCTTGCGGATGGATTTTGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGGCGTTCTCATTCTTATTCACCGTTATAACTTTCCCAATCTCAATATGGATGTGCATAAAGATTATAAAAGAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TATGAAAGAGCCATCATCTTTAGATTGGGTCGCATTTTACAAGGAGGAGCCAAAGGACCTGGTTTGTTTTTTAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCTGCCATGCACTGACAGCTTCATCAAAGTGGACATGAGAACTATTTCATTTGATATTCCTCCTCAGGAGATCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCACAAAGGATTCAGTGACAATTAGCGTGGATGGTGTGGTCTATTACCGCGTTCAGAATGCAACCCTGGCTGTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCAAATATCACCAACGCTGACTCAGCAACCCGTCTTTTGGCACAAACTACTCTGAGGAATGTTCTGGGCACCAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GAATCTTTCTCAGATCCTCTCTGACAGAGAAGAAATTGCACACAACATGCAGTCTACTCTGGATGATGCCACTG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ATGCCTGGGGAATAAAGGTGGAGCGTGTGGAAATTAAGGATGTGAAACTACCTGTGCAGCTCCAGAGAGCTATG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GCTGCAGAAGCAGAAGCGTCCCGCGAGGCCCGCGCCAAGGTTATTGCAGCCGAAGGAGAAATGAATGCATCCAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GGCTCTGAAAGAAGCCTCCATGGTCATCACTGAATCTCCTGCAGCCCTTCAGCTCCGATACCTGCAGACACTGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCACCATTGCTGCTGAGAAAAACTCAACAATTGTCTTCCCTCTGCCCATAGATATGCTGCAAGGAATCATAGGG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GCAAAACACAGCCATCTAGGCTAGTGTAGAGATGAGCGCTAGCCTTCCAAGCATGAAGTCGGGGACCAAATTAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCTTTAACTCATAAAGAGAGGGTAGGGCTTTTCTTTTTCCATATGTCAATTGTGGTGTTCCCAGAATGTATAGC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AGTTATAAAAATAGGTGAAAGAATTGTTAGCTTGTAAATACTGAGAGATTGGTGATTTATATAAGGTAATCTGT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TAGTCTTAAAATAGTTAAAAGTTTGTATTTTTAGATTATTATGTAGTAGGTTAGATCCCTCTTGTTTTGACTTC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CACTGACTCATTCTGAACCCCCTAAGCACCCAGGCCAGAGGCAAGAACCTGGGCTGTAACTGCCACCTGACACC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GCTGACTGGCTAAATGCTTTGCAGAAAGTGATGACCTTACACCACAACCAGCTTCTCCAGGTCATATGTGCCTT 1480
Query 1 ----------------------------------ATGGAGTCTCATTC-TGTCGCCCAGACTGGAGTGAAGTGG 39
|||||||.|||.|| |||.||||||.||||||||.|.|.|
Sbjct 1481 ACCTCCAGAGAGTCTTTTTTTTTTTTTTTCTGAGATGGAGTTTCACTCTTGTTGCCCAGGCTGGAGTGCAATAG 1554
Query 40 CATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTG 113
|||||||||||||||||||||||||.|||||..|.|.|||||.||||||||||||||.||||||..||||||||
Sbjct 1555 CATGATCTCGGCTCACTGCAACCTCCGCCTCCTGGGTTCAAGAGATTCTCCTGCCTCAGCCTCCCCAGTAGCTG 1628
Query 114 GGATTACAGGCACACGCAACCATGCCCGGCTAATTT-----------TTTTTGTATTTTTAGTAGAGATGGGGT 176
|||||||||||.||.||.|||||||||.|||||||| ||.|||| |||||||||||||.|||||
Sbjct 1629 GGATTACAGGCTCATGCCACCATGCCCAGCTAATTTTTGTATTATTATTATTGT-TTTTTAGTAGAGACGGGGT 1701
Query 177 TTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG------------------------------- 219
||||||||||||||||||||.|||.|||||||||.||||||.|
Sbjct 1702 TTCACCATGTTGGCCAGGCTAGTCACGAACTCCTAACCTCAGGTGATCCACCCACCTCTGCCTCCCAAAGTGCT 1775
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1776 GGGATTACAGGCATGAGCTACCACACCTGGTTTGGAGAGTCTTAATTAAGGAAATTTCCCTAATGTTCATTTAT 1849
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1850 TTTCTAAATCCAGACCGTGTTTCAGAATAATCCTTACTTGAGAGTAGCCATTTTCTTGCCTGTACTTGTCAGAA 1923
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1924 CTAGAGGAAATAGCCAAGACTAATGAAAAAGATTACTCTAACCCTTAAAAGACTTTTAAATTCACTACTAGAGT 1997
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1998 GGTCATTTTAAAAATACATCCATGTTTTAACTTATTTGAGCCTTCTTTATGAGTAAATGATTCCTCCTTGTTCT 2071
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2072 GTCTTTCAAACCAGCTAAATATTTGTCACAAAAGTGCTTTTTTCTCACTGTTGCCTATTTTCATATATCAGGTT 2145
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2146 TTAAATAGTTTTAATTTTTTAATAAAATTTTCTCTACGTTCTATATGCAATTGTTATATATCTATTTGAATAGC 2219
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2220 TGAAGGACTAAAATACTTTTTTAAGAGATAACTTCAGGAAACCATTATATTTTACTATCTGCATGCTGTTAACT 2293
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2294 GTGGTACACTGTGAAATATGTTGATTACAAACCCATTCATTACATAGTATAAGGAATTCACAGTATATTGACTA 2367
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2368 TATAGTGTCTAATGATCTTGGGCAGATACTGTCAAACTTACAATATCTATATAGATGTAGGTCTTTTTAAATTT 2441
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2442 ACCTAGTCATTCTTCTATCATGTATATTGATGCTGAAAGAGGAACTGGTCAGCTCCTCTGGACAACAAATTCTT 2515
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2516 AGTCTATAATATTAGGAGACATCTTCTGTTTTGCAAATGTCTGTGAATCTGAGCAACCTGGCATTCTGCTTACT 2589
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2590 GGCCAGAAAGCTGGCGGGTGACATTTGTAACATTTCCTCTTTGAGACTCTGAGTTCACCTAGAGAAGTCTAAGC 2663
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2664 ATAACAGCTTTCTTTCCCAGCACGAGCCTTTATAGCTCTCTTTAGCTCAACCACTCTGTCCATCCAGCCAATGG 2737
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2738 ATGTCCCTTCCCCTGTACCCCAATTTCAAGCTTATTTTAGGAAGCCTTGAACTACCATGTATCCTGGCTCCTAG 2811
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2812 CTGAGTTTATTAGAGGTATGGAGCAGTGCAACTTAAACTCAAGTTGCACTTACATTTTGAATTTTAAAATGATG 2885
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2886 GTTTTATCTGTTGTGTGAAGTGGTTCACCCTTGAGGACCAGGAGCCTCCATATCCTGACTGAAAACCTTTTCTG 2959
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2960 AGACTTAGAGTAACAGTGCTTTTGGTTCCTTGAGTTCTCCTGTCTCCAGATACCAAATGACCTTGACTTTTCTG 3033
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3034 CCTTGTGAATTCGTAGTCCAATCAGCTGAAATTAAATCACTTGGGAGGGACGCATAGAAGGAGCTCTAGGAACA 3107
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3108 CAGTGCCAGTGCAGAAGTTTCTCCAGGTGGCCTCCCTTTCCAACAATGTACATAATAAAGTGTATGCACTTTCA 3181
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3182 CTAATATTTTTGGGGTGAGAGTCTGTTTCGGCCTGTATTGAATGTCTGTGGATTTCCGTTTTCAGAAGTAGTAC 3255
Query 220 -------------------- 219
Sbjct 3256 ATTAGATCCTCCGGTTCTGA 3275
