Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12783
- Subject:
- NR_073189.3
- Aligned Length:
- 6133
- Identities:
- 187
- Gaps:
- 5918
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCACAACACAAGGAGAAACTTGGTGTCCAGGGGAGGCCCCCGGCGGCTGGAGCGCGGCGGCAGCGGGCGCAGAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCCGGAGGGAGAGGAGGCGAGGGGCGGCCCGAGCGCGGGGCGGGAGCGAGGCCAGCGGTCATGTGCCCGTGCCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCTGCACCGCGGCCGCGGCCCCCCGGCCGTGTGCGCCTGCAGCGCGGGTCGCCTGGGGCTGCGCTCGTCCGCCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGCAGCTCACCGCCGCCCGGCTCAAGGCGCTAGGCGACGAGCTGCACCAGCGCACCATGTGGCGGCGCCGCGCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGGAGCCGGAGGGCGCCGGCGCCCGGCGCGCTCCCCACCTACTGGCCTTGGCTGTGCGCGGCCGCGCAGGTGGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGCGCTGGCGGCCTGGCTGCTCGGCAGGCGGAACTTGTAGGAACGCGGGGCTTCTTGGTGGGGCCGGAGCCGAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACCCAGCCGGAGCGAGCAACAGCCTACATCTGACCTCAGAATACCAGCCGCTCCGGCCTTTCTTGTGCTTTTGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TTTAATTTGGGGAAACTCATTTTTTCCCAGCTCTGAGCCCCAGGGGAGGCTCCTCTGAGGCTGGGGAGGCCTGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGGAGGATGGGTATGATTTAACCAGTCAATACTCAAAGATACAGGAGAGAGGGAACAAAAGACGCTTTATGGTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTTGAGATCTTCCCATGTCAACACGCAAAGGTTTTCCTCATCCTTTTTAATGGCTGCATGATGTTCTGTTGCTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGATGAACCAGGATTTCCTTATATGGTCACTTCCTTGGGAACATTTGCATTGTTTCCTGTTTTCTGGTTGGTGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAACCCTGTGTCCTTGGAGAAAGCTGGTTCCCGTTTTCCAGAGGGGGAGCCCAGAGCTTGAAAGGCCGCGGTTG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GCACTTCGAGAAGGAAGTGGAGAGTAAAGACAGCGCCTGGAGCGATCGTAGAAACACAGAATGGGACTGGGGAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GCCCTTTGGAAATCCAGCTGCAGAAACAGACACCCCAATGCTATTTACATACAGCTCTATATATATAAAAAAAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AAAATATGAATATTACGTATCAGTGCATGCCTTGTTGAGGACGTGGTTGCCTTCCTTTTCTGCACCTTGCGATG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TGAACTTTGATATTCTGTAATGTCTGGGGCGCCAGAAGAGAGATGCCTGCTGTGTACTTAGAAACTATTTGCAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AGACTGGTGGGAATTAGCCCCAGCATCGGCCAACTGCCTGGGGATAGATGCTGGTGGAATAAGAGGTAACAGTG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CAAAAGGCATGATAGAAAAAAAAAGTGAGGACTTGGGACCGATTGTGTAGGGGCAGTCTGGGATGCCTCCATTT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTTGACTCGTCCTAGCCTCTCCCTCTGTACTTACCTAGGTCGATCGCTAGATCCCACTGTCACGTCAAGAGAAA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGGGATTTTTGTGTCTCTGGTGCTTCACTTAAAATTTTGCTGGTGCTAAGTGCGTTCCTGCTGGTGCTGCTGTG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GTATTCTGTTGACAGACTTGGAAGGCCAGGGGACAAGAGAGATTTCTATTTTGCTGTTTCAGATTCTTTTTTTT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TTTTTTTTAAGGGACAAGTTGCAAAAGTGCCACTTGAGAGTCTCTTCTCTTCTTCTACCTGGGGACGAATATCC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AGAGGTGGTTTGGAGCAAACCTTGGGGTCTAGGAGGGAGGATGGCATTGAGAGGCTTGCTGGTTATGAGGCAGA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AAGCTGACCTCATGCATGACTTGGTTGCTATCTCCCCCACCCCCACAAAAGTGTCCTCGGAGTTCAGCCCACAG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CCTCCTCCACTCCCCAAGGGGATTTCAGGGTTTAGGTTTTATGGATTAAAGAGCCAAGAAATGGCTACATTCTG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TTCAAAGATGATTTATAACCGGGGGATGTTGTGGGAGGGAGTGGGCCATTTAAATGAAATGCACCAGCATCTCA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CTGATTGACAGAGGTCTGATTTTTTTCCCCCCAAGGATAAGCTACTATTTTCAGAAGTTTCTAGAAGGGCTAAA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AAAAGATGTGTGCTGGACGGAGACTTGGCTGCAAAGACTCTTCAGGGAGCAGTGATTATTTTTTGCTTTCATTT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TCGAAAAATCCAACATAAGCAGGTATTCTTCCTCTGTGCAGGATACCACACACTGCCATTTTCAAAGCCGAGGT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GGCGAGGTGTCAGGCTGCAGATTCGGACGGTCATTCTCCAAGGCTGGATTTGCAGGTCACCACCCGGTACCTAT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 AGACAGAGGGTCCAGCAGGCTGGTTAGCAGACACCGCTCCAGTTCTAAGACGCCAGCAGTGGGATCCATGTTTA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AGGTGGATGCGGCTGAAATGGGAATTATCCCCCCACAGGCTTTGCTGTACAGTTCTAAGAAGCCAGCAGTGGGA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TCCACATTTGTTAAGGTGGATGCGGCTGAAATGGGAATTATCCCTCCATAGGCTTTGCTGTAAATGACCAGGTC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CTTTAGAATGTACAACCTCTCAGTGCTGCTGCAAGCTGGGAGCTGGATTTCTTTCTGTCTTCCTTTTAAAATCC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GTTCCTTGTGTTTTCCTAAATAGCCCTTTAAAGAGAAATGCAACCCCAGGGCTGCTGAATGCCAGGGAAGACTC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CCCCACCCCGCAGCTTTGAACTCAGCAAACCAAAAAAAAAAAAAGAAGAATAATGCTTATTTTGGGAGAACGTG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TTTCTCCTCATTACTCGTGCCCTCCCCCTAGCTGATGTTTGCAGGGGACCCTCGCTTAGCTGGGGACTGCAGAG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 AGCAGTGGGTAATATTCCCACAAAGCTACGAACTTAGAGAAGGCAAATTCATTAGAATAATATGAAATACAGTC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 ACTGCTTCTATTTAATCACTTTCTTAGCCACAGACTAGGGTCTTTCCAGCTCCCCCCATTTTCTGGGGAGGGGC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GTCCATTACTACACAGCTGTATCCAATCACAGTTCTCTGCTTCTTTAAGGCTGTACCTTCAAGATCGTAGTGGG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GGCATGCTGACCACCTGTAGACACAGGAGAAGATGAAAGGTGAGAGGATCCCTTTTTCAGCCCCGACTTGCCTA 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 CTGGCTTTTGATGTTTCCCCTGGAGGATACAAACTCCAAACGCTGGGGTTGGCATTTTGGGTGATTTTGATTTC 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 AATGAAGCCACTTTGCTGAGAGAACTGGGGCACCCACGACCTCCTGATAGAGCTTCTCAGCCAAGTCCCTTGTA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 GATATTCTCCTGTTTTATTAGAGACCACGTATTTATCGAATCCTGACCTTTCCTTGCACATCATTCATTGGAGT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 GCACTTCTCGACTGCCCCGATTTTTGACACGGGGTTGTTTTTAATGCTTGTTTTTATATGAGATTTGACTTCTT 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 GATGGACATTTGTATTAGGAAATTGAAGCATGATATATATGTATATATTGTCTCCACCATCTCTCCTGTTGTAT 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 TACTTGGATTGCATGAGATAGTGGGGTGGTTCTTGTTTTTTAAAAAATATTTCCACAGTGTGCAAAGTGCTGGC 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 AACATCCCTCCCTCTCCTCCACCGCTCCCCCACTTTTCTCTGGCTGCCAAGGAGTCATTGATTTTGATTAGCTT 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 CACTGCAGAGCGTCTGTGAAGAGAGAGAGAGAGAAAGGGAGGGAGGCTTTGAAATAAATTTTAAAAAAGACCTC 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 ATATCGGGTTTCAGCAGACAGCAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAC 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 CGTACAAGCAGAGGGAGGCCTCTGAGATCATCGTTTAGGTAGCTTGCTGCATAATGAGATGAAGAGACTTTTGC 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 CTCTTCATTTCTGATGGTGCTGCTTGCTCTCAGAGAGTGGGGAGCCAGGAACCGCTGGGACTGGAGCCCCCGGG 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 ACTTCAACACTCCGAATGAGATCCAGTCCTTTCTGGAAGCTTCTCACCCCCACCTGATCTCCCACAAACAAATA 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 CAATCTCTTCAAATTTGGGGGTCCGTTTCCTATTCTCTTTGTTATTGGTGTAGCTTGAGTAGGAAGTTTCTCTG 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 GGGAGCCCATTGGCCCCAATGGCTGCTGTCCATGGTCCTAGGCCGTGCGCATGTCCTAGACCCCAGTTCCTGTT 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 TTGTTTTTTTTTGGGTTTTTTTTGGCCCTGCGCATCTCTTAGAGCCCAGTTCCTGTTTTTTTGTTCGTTTTTTT 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 TTTTTTTTTTTAGCCGCCTTCATTTGGATACTGGGGACTTCTTTTCCACTTCTTCTTCTTCTTCTATTTTATTT 4218
Query 1 ----ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTC 70
|..||||||||.||||||.|||||.||||||||.|||||...||.|||.|||||||||||||||..||||
Sbjct 4219 TGAGACAGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGTGCGAGCTCAGCTCACTGCAACCTCCACCTC 4292
Query 71 TCGAGG-TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGC 143
|.||| ||||||||||||||||||||.||||||.||||||||||||||||||||||.|.|.||||.||.||||
Sbjct 4293 -CCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCCACCACCACGCTCGGC 4365
Query 144 TAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCA 217
||| ||||||||||||||||.||||||||||||.||||||||||||||..||||.|.|||||||||.|||||
Sbjct 4366 TAA---TTTTTGTATTTTTAGTGGAGATGGGGTTTTACCATGTTGGCCAGAGTGGTTTTGAACTCCTGGCCTCA 4436
Query 218 AG------------------------------------------------------------------------ 219
||
Sbjct 4437 AGTGATCCACCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGAGCTCAGCCTCCACTTCT 4510
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4511 TATTTTGATTCTTTTCTGTTTTGATGGTGAGAGGAAAGGGTGATTTACCCAATACTGTCACAGAAAAATGAAAC 4584
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4585 TGTGACTGGTTTTCACAATGTATGTAGCTGATCTCATGTTCTCCTATTATTATGTTTCTGACAGTGATAAAATA 4658
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4659 TCACTCTCCCTCCCTGGGGCATTAGAGGAGTCCTCACCCACCCACCTCCTACACAAGTATCTTTTAGGGACAGT 4732
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4733 GGCTCACCATTGTGGACTTTTTGAGTGTCCACCTGATATTACAAGTTGCATTGACCAGAACACAGATTTTGCTC 4806
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4807 TTCTGTGTCAATACCCATTTCTTTTCTGAAGGTCAGAAGTTGGTTAAGGGTTTGGGGGACCAGCTAGACACTCT 4880
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4881 TCTTAGTCCCATGGAGCTGACTGGAAGTTCCATGAGGGGAGGAAATTGATGTCAAAGTGTCATTTTAAAGCTTA 4954
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4955 AGCTGAAAGTTTATTTTTTAAATTCTCATTCATTCATTTAGCATATATTGATTGAGCATCTACAATGTGCCAGT 5028
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5029 TGTAGAATTCCATCTCAGAAGAGACTTGACTTGTGGATGGTGGAGGGGCAGTCCTGCTCGGAAGCAGATGATGT 5102
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5103 GAAATGTTCCTTTCCAGTCTGGTTCACGATGTTTAACAGATTTGTCAGGTCACCACTGTGACCCCAAGCTTTGC 5176
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5177 TGGCAGATTGTTATATAGTATTTACTGAGAGCCCTGCTATCTGGTAAAGGCAGTTAAAAAGCCTGCAATCTCGA 5250
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5251 CTCATTTCCAGCATGAACAGACTGGTCCTTGCTGCTTTACACAATAATCAAAGCTACCTTTTATGGCGTGCTCG 5324
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5325 CCACTCCCAAGCACTGGGCGAAGTGCTTTACCCGTCTTCCCCTCCGCGATGCCTCATGCCCACTTTAGCAGATA 5398
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5399 GTACTGTTAGCATTCCCATTTTACAGTGGAGGAAGCTGAGGCTCAGAGAGGTTAAGCAACTTAGCTGAAGGCCA 5472
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5473 CACCACCAGCGAAGTGCCTGAGCCAAGATTTGGACTCGAGTCCATGGGACCCCCACGCTCGTGAGCTGACTGCT 5546
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5547 CTGCTCCACTGGGTCCCTTCATGAGGTCGTCCCACAGCACTGCTAGTTCCAGGGCGAGTGCCAGCACATGGCCC 5620
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5621 CACTGGGAGCCGGGGCCTGACTTAGGTCTACTGGAAAAAGTGTCACCTTTGGGGACACTCAAGGACAGGCTGGT 5694
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5695 TGGTTTCGTTGTGGATTTTATATACTCATGCCCTAACCCTGTGTTCCTGGTTTCTATAAGGCCCCGGGGAAGGT 5768
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5769 GCAAGGAATTTGCAAATAGGGCCTGTATGACTTATTTCCTAGGACACGGGAAGCTTTTCTTACCTCCTTTCTAC 5842
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5843 CCTCTTCTCCAACCTGAACTCCCAAGTTTCTTCTCCTGAAGGTCTTTGCACTATAAGCGCCAAGGAGCCCGTGT 5916
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5917 GCGTGGCAGGGGCGGCTGGGAGGGTATCTGGAGAACCTTAGTGAGGCCTCTGGCCTAGCCAGAGAGGCAATAAG 5990
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5991 CTTGGGGACGTTCCGTTCTGGGTTCTGACGTTGTTGGTTCTGACGTCGTTGTGCTCTTTTGTAAGAGGAATTTC 6064
Query 220 ----------------------------------------------------------------- 219
Sbjct 6065 ATACCTTGGAGACGCTTTGTACATATTTGTAATGACTTTATTAAAAAACTGATTGTGCACTTCTA 6129
