Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12783
- Subject:
- NR_077240.1
- Aligned Length:
- 2962
- Identities:
- 192
- Gaps:
- 2745
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TATATTTGATTCCCTCTTGCAATATGTGCTTTTGATCATGAAACTGCTGAGAAAAGGCTCCTTCTAAACCACAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AACAAGGTTGCTGCTGGTGCTGGGGCCCGAGGAGGTCCGCGCCGGAGGAGGGCCACAGGGACTGAGCGAGTGAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGACGCACCACCCGTCAATGCTGCAACCCTGTAAGGCCTCCATGGACTCTCTACGTGAGTGTAGAATGAATCAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCCGACTCAAACACAGCAGCTATTCCACATGCAGTGGAAGATATTCAAGGAGACGACAGATGGATATCTCAGCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CAACAGATTTGTCCTGGATGGAGAGGGCTCTGCAAAGATCTGCAGAGCCCTCTATGAACTGATCATGCAGCTGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGGAGGAACACCCAAGGAGAGAAACAAACCACCATTGCCTGACTGGCTCCCATCAGCGTTAATCTCTTCCCAGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTCCTTGATCAGTTATGCCACTGGCACTACAGAATCCATCTCTTTCTCAAAGCACTTTGCATTGCAAAATGTTC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTGGATGTTCAGCTCTAGTGTTTGAAAGGGTGGAGGGATTTACACTGGCCTTGCACGTAGAAGGTTTATTAGAC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACAGGAGAAAAAATAGCCTAGGAAGATTGTTGTTTAAATTTATCTGAAACCAGAAGGAGACTTTTTAGTTGTAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTGTGATGCATTTGTTGAATTATCACTGTTTTTCCTAGGACAATATCAAGTCCAAGAACTGACCGATATGAAGT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TTTTTTTTCTTGGCCTTGCTTTCTATGGGTTATGTCATATGTAATAATTATCAGAATCACACCTACTTGGCTTA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAAACAGATTTTTATTTTAATTTTTAAAGCTCATAATTTAACCTTTTTTCTTGTTTTGCTTTATTCATATATAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCTCAATATTTTCTTAACATGCAGCAACAGATTGAACATGCTTGCCATTCAAATATGAGAGATGCTATAGTTAC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AAAGGAATTTGTTCCACTTTCTTAATCCTTCCTATGCATAGCAGTGAAAAACAAATTTTGCCCCATGCAGGGAA 1036
Query 1 -------------------------------------------------ATGGAGTCTCATTCTGTCGCCCAGA 25
|||||.|||||||||||.||||||.
Sbjct 1037 CCCTTTGGAAGGTTTTTTGGTTTTGTTTGTTTGTTTGTTTTTTGTTTAGATGGATTCTCATTCTGTTGCCCAGG 1110
Query 26 CTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCT-CTCGAGGTCAAGCGATTCTCCTGCCTCGG 98
||||||||.|.|.||||||||||||||||||||||||||||||| ||.| |.||||||||||||||||||||.|
Sbjct 1111 CTGGAGTGCAATAGCATGATCTCGGCTCACTGCAACCTCTGCCTCCTTG-GTTCAAGCGATTCTCCTGCCTCAG 1183
Query 99 CCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATG 172
||||||||.|||||.|||||||||||.|.|.|.||||.|||.|||||| |||||||||.||||||||||..|.|
Sbjct 1184 CCTCCGGAATAGCTAGGATTACAGGCCCCCACCACCACGCCTGGCTAA-TTTTTTTGTGTTTTTAGTAGCAACG 1256
Query 173 GGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG--------------------------- 219
||||||.||||||||||.|||||||.|||||||||||||||||||.|
Sbjct 1257 GGGTTTTACCATGTTGGTCAGGCTGATCTCGAACTCCTGACCTCAGGTGATCCACCCACTTCGGCCTCCCAAAG 1330
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1331 CGCTGGGACTACAGGCGTGAGCCACCGCAGTCAGCTGGAAGGTATCATTTTTATGTTGCTAAATATCATGTCTA 1404
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1405 TCATAAACCTATGCCTGCAGCCTTTCCTCTTCTCTGAAGTATAAGCCCCCCTTACTCTCATGATATTACCAATG 1478
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1479 TAGAACTCATTCTTGTGTGGTATTCTGCACTATAGAGTCTGCGTAGTGTTCTGGTATGTTCTGGTATGTTTTGT 1552
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1553 TTGCTTTTCCCTGAAAATCTGCTATAGTTTCCTTTTTTTGGAAAAAAAAAACAACAAAAACCTCTGCTTTCCAT 1626
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1627 TCCATACTACCTGCCATTATTTCAAGTTTTATAATATCCCAAGGTGTACATTTTATTTTTTTTTAATTGACTTT 1700
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1701 GTTTTTAAATAAAGCAGTCCAGAAAATTTGGTCTTTTCCCGGGAGGAAACAAATGAAGCTGCTCTTCAGAATAG 1774
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1775 CCATTCTGCTTTTATCCCACCAGTTCAGTAAAAAAGAACTAGATTTGTTTAACTTTTAAGGTTTCTCATTAACG 1848
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1849 TACCTTCACCTGAAAATTTCCTTCAAGAGAGCTCTTTATAATCTTAATGTTTGCTTGGGCAACAAGAACTGCCA 1922
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1923 TGTAAAAATAAATAATGGGACGATAGATGGCATATTGTTCAATATACCTGCGGAATATGTATAAACTGGATGTA 1996
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1997 CAGACAGATATTTTGAACTAGACCAGGTGGGTATTGAAGTAACCCAACAAAATGTGATCTGCAGTGATTCTGCT 2070
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2071 TAATGTTCAAATTCAACAGCTAAGGTATATGTTTTATGTTCTGCTCGCAAGGCAAATGGCAGTACTTTTGTGTG 2144
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2145 CTGGAGGAGAGGTTGCTGATTGGTGCCAAGACCCACTTCTGATTGAGAGGGATAAAAGTTGGGCTGAATTTTCT 2218
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2219 CTAGTCAAGACTCCTTCTAGATTTTTTTTTTTGTCTTTAAAAATACATACTTTAAAAATGTATCATGTCTTCAT 2292
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2293 TAATAACAGAAAATACACATGGTGCTCACTAAATTTGTTTACTACATTAAAATTTCCTTTTTGTTTTTAGTAGT 2366
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2367 CCAGGTTCTTGAGTTTTTTCAAGGCAGAATTTTTTTATTTTATTTTATTTTTAGCTGAGGTACAGTTGTATAGG 2440
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2441 AAGGAGAATTAAGCCAGAATTTGGTGTGTGCAAAGACAATTTCCTATCCAGGTCTTTTTCTGTCAGAGAGTGAG 2514
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2515 AGTTTTGTCCAAATGAACCCATTAGGTTACTACTGAGCATGCGATTTTAGCTTTTCTTTTCACGGAGGATCAAA 2588
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2589 TATCCCTTTGTGAGCTGAGCTTCCACTTGTTTGCTTATGTATGTAAACTTCAGATATCACTATATTCTATATCT 2662
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2663 ACCACAGCTATTCAGGCAACAGTATTCTAATAGCTAGCCTTTAAATAAAAATCTGCCTCATTACTAATGTTCAA 2736
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2737 AAAAACAAAGATAAAAATAGGTCTAATCCTAGGTAGAAAAGGTGTTTTTCCATACATCAAGATTTATAGAAAAG 2810
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2811 GAGATTCAGAGTCATGCTAAGACAGAATTTCAATGCTTACATTGTTCTCCTCAAAGATAAATTCATTCATCTAA 2884
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2885 CCATCTTACAGAGTAATCTTTGTTTTTGTTTGGTTCTTTCCATTAAAAAAATTAAGATCGAAAAAAAAAAAAAA 2958
Query 220 -- 219
Sbjct 2959 AA 2960
