Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12783
Subject:
NR_077240.1
Aligned Length:
2962
Identities:
192
Gaps:
2745

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TATATTTGATTCCCTCTTGCAATATGTGCTTTTGATCATGAAACTGCTGAGAAAAGGCTCCTTCTAAACCACAA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AACAAGGTTGCTGCTGGTGCTGGGGCCCGAGGAGGTCCGCGCCGGAGGAGGGCCACAGGGACTGAGCGAGTGAC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AGACGCACCACCCGTCAATGCTGCAACCCTGTAAGGCCTCCATGGACTCTCTACGTGAGTGTAGAATGAATCAA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GCCGACTCAAACACAGCAGCTATTCCACATGCAGTGGAAGATATTCAAGGAGACGACAGATGGATATCTCAGCA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CAACAGATTTGTCCTGGATGGAGAGGGCTCTGCAAAGATCTGCAGAGCCCTCTATGAACTGATCATGCAGCTGA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TGGAGGAACACCCAAGGAGAGAAACAAACCACCATTGCCTGACTGGCTCCCATCAGCGTTAATCTCTTCCCAGC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TTCCTTGATCAGTTATGCCACTGGCACTACAGAATCCATCTCTTTCTCAAAGCACTTTGCATTGCAAAATGTTC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CTGGATGTTCAGCTCTAGTGTTTGAAAGGGTGGAGGGATTTACACTGGCCTTGCACGTAGAAGGTTTATTAGAC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  ACAGGAGAAAAAATAGCCTAGGAAGATTGTTGTTTAAATTTATCTGAAACCAGAAGGAGACTTTTTAGTTGTAT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GTGTGATGCATTTGTTGAATTATCACTGTTTTTCCTAGGACAATATCAAGTCCAAGAACTGACCGATATGAAGT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TTTTTTTTCTTGGCCTTGCTTTCTATGGGTTATGTCATATGTAATAATTATCAGAATCACACCTACTTGGCTTA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  AAAACAGATTTTTATTTTAATTTTTAAAGCTCATAATTTAACCTTTTTTCTTGTTTTGCTTTATTCATATATAT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CCTCAATATTTTCTTAACATGCAGCAACAGATTGAACATGCTTGCCATTCAAATATGAGAGATGCTATAGTTAC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AAAGGAATTTGTTCCACTTTCTTAATCCTTCCTATGCATAGCAGTGAAAAACAAATTTTGCCCCATGCAGGGAA  1036

Query    1  -------------------------------------------------ATGGAGTCTCATTCTGTCGCCCAGA  25
                                                             |||||.|||||||||||.||||||.
Sbjct 1037  CCCTTTGGAAGGTTTTTTGGTTTTGTTTGTTTGTTTGTTTTTTGTTTAGATGGATTCTCATTCTGTTGCCCAGG  1110

Query   26  CTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCT-CTCGAGGTCAAGCGATTCTCCTGCCTCGG  98
            ||||||||.|.|.||||||||||||||||||||||||||||||| ||.| |.||||||||||||||||||||.|
Sbjct 1111  CTGGAGTGCAATAGCATGATCTCGGCTCACTGCAACCTCTGCCTCCTTG-GTTCAAGCGATTCTCCTGCCTCAG  1183

Query   99  CCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATG  172
            ||||||||.|||||.|||||||||||.|.|.|.||||.|||.|||||| |||||||||.||||||||||..|.|
Sbjct 1184  CCTCCGGAATAGCTAGGATTACAGGCCCCCACCACCACGCCTGGCTAA-TTTTTTTGTGTTTTTAGTAGCAACG  1256

Query  173  GGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG---------------------------  219
            ||||||.||||||||||.|||||||.|||||||||||||||||||.|                           
Sbjct 1257  GGGTTTTACCATGTTGGTCAGGCTGATCTCGAACTCCTGACCTCAGGTGATCCACCCACTTCGGCCTCCCAAAG  1330

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1331  CGCTGGGACTACAGGCGTGAGCCACCGCAGTCAGCTGGAAGGTATCATTTTTATGTTGCTAAATATCATGTCTA  1404

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1405  TCATAAACCTATGCCTGCAGCCTTTCCTCTTCTCTGAAGTATAAGCCCCCCTTACTCTCATGATATTACCAATG  1478

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1479  TAGAACTCATTCTTGTGTGGTATTCTGCACTATAGAGTCTGCGTAGTGTTCTGGTATGTTCTGGTATGTTTTGT  1552

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1553  TTGCTTTTCCCTGAAAATCTGCTATAGTTTCCTTTTTTTGGAAAAAAAAAACAACAAAAACCTCTGCTTTCCAT  1626

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1627  TCCATACTACCTGCCATTATTTCAAGTTTTATAATATCCCAAGGTGTACATTTTATTTTTTTTTAATTGACTTT  1700

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1701  GTTTTTAAATAAAGCAGTCCAGAAAATTTGGTCTTTTCCCGGGAGGAAACAAATGAAGCTGCTCTTCAGAATAG  1774

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1775  CCATTCTGCTTTTATCCCACCAGTTCAGTAAAAAAGAACTAGATTTGTTTAACTTTTAAGGTTTCTCATTAACG  1848

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1849  TACCTTCACCTGAAAATTTCCTTCAAGAGAGCTCTTTATAATCTTAATGTTTGCTTGGGCAACAAGAACTGCCA  1922

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1923  TGTAAAAATAAATAATGGGACGATAGATGGCATATTGTTCAATATACCTGCGGAATATGTATAAACTGGATGTA  1996

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1997  CAGACAGATATTTTGAACTAGACCAGGTGGGTATTGAAGTAACCCAACAAAATGTGATCTGCAGTGATTCTGCT  2070

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2071  TAATGTTCAAATTCAACAGCTAAGGTATATGTTTTATGTTCTGCTCGCAAGGCAAATGGCAGTACTTTTGTGTG  2144

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2145  CTGGAGGAGAGGTTGCTGATTGGTGCCAAGACCCACTTCTGATTGAGAGGGATAAAAGTTGGGCTGAATTTTCT  2218

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2219  CTAGTCAAGACTCCTTCTAGATTTTTTTTTTTGTCTTTAAAAATACATACTTTAAAAATGTATCATGTCTTCAT  2292

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2293  TAATAACAGAAAATACACATGGTGCTCACTAAATTTGTTTACTACATTAAAATTTCCTTTTTGTTTTTAGTAGT  2366

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2367  CCAGGTTCTTGAGTTTTTTCAAGGCAGAATTTTTTTATTTTATTTTATTTTTAGCTGAGGTACAGTTGTATAGG  2440

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2441  AAGGAGAATTAAGCCAGAATTTGGTGTGTGCAAAGACAATTTCCTATCCAGGTCTTTTTCTGTCAGAGAGTGAG  2514

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2515  AGTTTTGTCCAAATGAACCCATTAGGTTACTACTGAGCATGCGATTTTAGCTTTTCTTTTCACGGAGGATCAAA  2588

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2589  TATCCCTTTGTGAGCTGAGCTTCCACTTGTTTGCTTATGTATGTAAACTTCAGATATCACTATATTCTATATCT  2662

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2663  ACCACAGCTATTCAGGCAACAGTATTCTAATAGCTAGCCTTTAAATAAAAATCTGCCTCATTACTAATGTTCAA  2736

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2737  AAAAACAAAGATAAAAATAGGTCTAATCCTAGGTAGAAAAGGTGTTTTTCCATACATCAAGATTTATAGAAAAG  2810

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2811  GAGATTCAGAGTCATGCTAAGACAGAATTTCAATGCTTACATTGTTCTCCTCAAAGATAAATTCATTCATCTAA  2884

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2885  CCATCTTACAGAGTAATCTTTGTTTTTGTTTGGTTCTTTCCATTAAAAAAATTAAGATCGAAAAAAAAAAAAAA  2958

Query  220  --  219
              
Sbjct 2959  AA  2960

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