Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12783
- Subject:
- NR_104275.2
- Aligned Length:
- 3412
- Identities:
- 189
- Gaps:
- 3196
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGTACTGGGCTGGCTGCGGTGGCGCGCGGGCGCGGCACCCGGAAGTCGGCGGCGGTGGCGGAGGCGACCTCGCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACCTGTGTCAGCAGAGCCGCCCTGCACCACCATGTGCATCATCTTCTTTAAGTTTGATCCTCGCCCTGTTTCCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAAACGCGTACAGGTAACCCCCTCGCTCTGCATCTGCTGCGCCCTGCAGGGTCCTGGGTGCCCAGCCAGTTCTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATGCCACCCAAGCTGCTGTGTGCAGGAAGGTGTGTGGGCCAGGACGGGGCTGCACAGGCCTGGCACTGCCCTCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGGACAGGGTCACTCAGTGTGGGATGCTGTCAGAATGCCTCTCGGGGCGGGGACTCCAGTCAATGTACAAAGAC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTGAAGACTCAGCCACAGAAGGCAGCCACAGGCTCATCTTGGCAGCCAACAGGGATGAATTCTACAGCCGACCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCCAAGTTAGCTGACTTCTGGGGGAACAACAACGAGATCCTCAGTGGGCTGGACATGGAGGAAGGCAAGGAAGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGGCACATGGCTGGGCATCAGCACACGTGGCAAGCTGGCAGCACTCACCAACTACCTGCAGCCGCAGCTGGACT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGCAGGCCCGAGGGCGAGCACAGCAAAGGGAGACGTCATTTGCTACTATGGGAACCGAGGGGAGCCTGATCCTA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCGTTTTGACGCCAGGCAGCTGCCAGACCCGGCCATCGAGGACCAGGGTGGGGAGTACGTGCAGCCCATGCTGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCAAGTACGCGGCTGTGTGCGTGCGCTGCCCTGGCTACGGCACCAGAACCAACACTATCATCCTGGTAGATGCG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GACGGCCACGTGACCTTCACTGAGCGTAGCATGATGGACAAGGACCTCTCCCACTGGGAGACCAGAACCTATGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTTCACACTGCAGAGCTAACCCCACCTCTGGGCCTGGCCAGTGGGCTCCTGGGGGGCCCTGCCTTGAGGGGCAC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGTGGACAGGAAACCTTCCTTTGCCATACTGCATTGCACTGCCCGTGGCTTGGCCAGCATCCCCCGGATCAGGG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCCTGTGGTTTGCGTGTTACCCATCTGTGTCCCCATGCCCAGTTCAGGGTCTGCCTTTATGCCAGTGAGGAGCA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCAGAGTCTGATACTAGGTCTAGGACCGGCCGAGGTATACCATGAACATGTGGATACACCTGAGCCCACTCTTG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CACATGTACACAGGCACTCACATGGCACACACATACACTCCTGCGTGTGCACAAGCACACACATGCAAGCCATA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TACATGGACACCGACACAGGCACATGTACGTGCACAGGTGTGCTACACATGTGCACACATGCACAGTTGCACAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ACACACACACACAGGTGCACACACACGATGCCGAACAAGGCAGAAGGGCGACTCTCACCTCTCATGTGCTTCTG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GCCAGTAGGTCTTTGTTCTGGTCCAACGACAGGAGTAGGCTTGTATTTAAAAGCGGCCCCTCCTCTCCTGTGGC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CACAGAACACAGGCGTGCTTGGACTCTTGACAAGCAGACCTGCTCCTGCAGAGGAGACAGCCACATTTGGAATT 1554
Query 1 -----------------------------------------------------ATGGAGTCTCATTCTGTCGCC 21
|.|||||||...||||||.||
Sbjct 1555 GGGCACCGAGAAGACCTGAGAAAAACCCACTCTCTCTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCACC 1628
Query 22 CAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCGATTCTCCTGCCT 95
|||.||||||||.|||||||.||||||||||||||||||||||.|||||.|.||.||||||.|||||||||||.
Sbjct 1629 CAGGCTGGAGTGCAGTGGCACGATCTCGGCTCACTGCAACCTCCGCCTCCCAAGTTCAAGCAATTCTCCTGCCC 1702
Query 96 CGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAG 169
|.||||||.||.|||||||||||||||||....||.|||||||||.||||| |||||||.||||||||||||
Sbjct 1703 CAGCCTCCTGATTAGCTGGGATTACAGGCGTGTGCCACCATGCCCAGCTAA---TTTTTGTGTTTTTAGTAGAG 1773
Query 170 ATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGA----------------CCTC---------AA 218
|.||||||||||||||||||.|||||||||||.|||||||||| |||| ||
Sbjct 1774 ACGGGGTTTCACCATGTTGGTCAGGCTGGTCTTGAACTCCTGACGTGGTGATCCACCTGCCTCGGCCTCCCAAA 1847
Query 219 G------------------------------------------------------------------------- 219
|
Sbjct 1848 GTGCTGGGATTACAGGCGTGAGCCACCACGCCTGGCCGAAAAACCCACTCTCATAACAGAAGTGCAGACTCATT 1921
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1922 GCTAGATTCAGTGCCCTTGAGTGTGCCAGAGGTCCTCTGTGTTTGAGACAATCCTGTGTGTGCCAGGAGGCTCC 1995
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1996 GTGTGCACCAGGGGCTCTCAGAATCCCGCTTACCCAGCTGGAGACCATGCCTCTGGCAGCCCCATCTCAGCCAG 2069
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2070 CCCTGCTCTCTCCCTCTTCCCTCCAGGTGAGGCAAACTTCATAGGAATCTGTACCTGAATGTGAGCTCCTGATA 2143
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2144 ATAAAACTCTGAGGCTTTGGTGAGCGCATTTCGAGGCCTTTCCCTTGTATGCAGGGTGCCAGTGGGAGCTGCTA 2217
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2218 TGTCTCCTGTGCAGCCAGACACCCTGGACGAGGCCCTTCCCACCTCCCCCTTTCCTCACGGCTTCTTCAGCACC 2291
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2292 ACATGTGGATGCCTGTGGGTCAGTCCATCTGTCCATGGGCAGGGGCCGCTGTGAGAGACCCCATGCGCGTGGGA 2365
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2366 TGTGGTAGATGCTGATTATGGGGCCAGCCACCCATACAGGTCTATCAGGTCGCAATGGAGGCCCCACTGGAGCG 2439
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2440 GGAGGCAGGCTGGCCTGGACTTCTGTTGGATGATGGGGGCCAGGGGATGGTAGGAGGGGCAGGAGAGCAGGTCT 2513
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2514 GCATCTGTCTCAGCCCCAGGAGCTCCTGGTTTGGGGCCAGCTCTAAGGAGCTTCATCCCTGAGCCTGGCCGAGT 2587
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2588 ATAAGGGGGTCCCGGATATCCAATGCTGAGACCTAGACTTTTCTAAGCCTCTGCACCCAACCCCTAACTTGGCC 2661
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2662 TTTTCAGACCCATGAGAGTGCAGGGTGGGTGTGGACCTGCGCCAGGGCTTCCCAGCCTGATTGTGACATGATGT 2735
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2736 GAGTCCACCTAGGGAGGAGCAGGGGCCTCCCCGTCTCTTCCCCTTCTTGCCCAGACCACTTTGCTGGGCTCAGA 2809
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2810 GCCTTCCATGGCTCACTTTGAACTCAGAAGAGTTTCCCAGCTGCGACCCAGGCTGCACCCCCAGGCCTGAGGAG 2883
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2884 AAACTGAGGCCCCACATCCCATACGTGTCCTCTGAGTCAGGACAACAGGCTCCCGGCTGGGGGCACTGCCCTTG 2957
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2958 CTGCCAACACATTCACCTGCCCCAGTGGCTACCATGTCCTGTGCCGGTGACCAGTGCCAGTCCCCAACCTGGAT 3031
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3032 GGTGCCCTGCCCTCATGAAGAGCCCCCCGGATGTTCACCTCTGCCCAGAGACCCGGCCTGCCCAGGAAGAGCAG 3105
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3106 TCTCTGCTCTTGTGTGGGTCCCTCTGCCCCCACCCTGCCCAGGGCTCCCCAGCAGCCTGAGGCCCCTAAGGAAG 3179
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3180 AACAGCCCTCAATGGTGATTCTATTGGTGTTATGAGTTGTGTCCCCAAAGAGATATATCAGTGTCCTGACCCAC 3253
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3254 AGTACCTCAGAATGTGACTGCATTTGGAGATAGGGTTCTTCCAGGGGTAACCAAGGTAGAATGAGGTCGTTAGT 3327
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3328 GTGGGCCCTAATCCAATATGACGGCTATCCTTATAAAAAGAGGAACATTTAGGCTGGATACAGTGGCTCATGCC 3401
Query 220 -------- 219
Sbjct 3402 TATAATCC 3409
