Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12783
- Subject:
- NR_109783.1
- Aligned Length:
- 4239
- Identities:
- 188
- Gaps:
- 4022
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGCGGGAGGGACACGCCGATGGGAACATCCCAGCTGGTCCAGGCCTCTGCTCCCCCCAGCTCCTCCTCCCTGGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGGCAGCTCTTCTGGGCTCCTGAGGTGCTGCGCAGCCCCTTCCCTGGCCCTGGGACCCCCAGTGCCTGAGATGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAGAGGAGTTGCTTCCATGGACGGTCCCAGTGCAAGCTGGGGGGCGCTGGCCTCAGGACACCAGGCATCCAAGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CATAGGGACACCAGAAGCCCCGGCTCTGCCTCTGAGGTCCAGCAGCCCCAAAGCCCCTGCTCAGAAGCCAGCGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGGGAGGGCAGGGCCTGCCTGTGGGACCCATCATGGGCGCAGCAATCGCCAGGCCCTGGGCAGACAGCAGCACA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCCTGTGAGTCCAGGGCTGGGGAGCAGGCAGGTGACAACCAGTGTCCTACTTTCCTGCATTAAAACACCCAAAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CAACAGGACGGAGAAGGCCCGGAAGAGGGGACCTGAGGGAGCCAGCCGGGCGCTCAGCCTGCTTCGCTGGGATG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTTGTCGAGGTCGGGACGGCACCACCAAACTCACCTCTGTGCGCCCTGCGGGGCCCAGGAGACTCGGTCCTCCC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGGGCTCCCCCAGGCCTGGGGTGGACGTTGGAATAAAGTGGGGACAACACGATGAGAGACCCCAGCCCTGGAGG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGCCCTCGGCCAAAGCCCGAGATCAAAGCTGGGAGATTCGTGGCTGGACAGCACCACCTGGTGGACACGTTGGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GATTACCAAAGCCGAACAGTCAATTCGTTCTTGGTTCTGGGATTTTCTTAATTGGGTCTTAGCTGGGCCTTCCT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TTCTCTTTCCCCAGTAGCAGGGGCTTTGTGACTATCAGAAACACCTGCCAGGCCTGGGCAATATGGCGAGACCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CATCTCTACAAAAAAAAAAAAAAAAACACAAAAATTAGTGAGGCGTGGTGGTCCCAGATACTCAGGACACTGAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ATGGGAGGATCGCTTGAACCCGGGAGGTCGAAGCTGCAGTGAGTCGTGATCATGCCACTGCACTCCAGTCAGGG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGACAGAGAGAGACCCTGTCTCTAAAGAAAGAAAAGGCCGGGAGCAGTAGCTCACGCCTGTAATCCTAATACTT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TGGGAGGCCGAGGCGGGAGGATTACCTGAGGTCGGGAGTTCGAGACCAGCCTGACCAACATGGAGAAACCCCAT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CTCTACTAAAAAATACAAAAATTAGCCAGGCATGGTGGCGCATGCCTGTAATCCCAGGTACTCGGGAGGCTGAG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GCAGGAGAACCACTTGAACCTGGGAGGCAGAAGTTGCAGTGAGCCGAGATCACACCATTGCACTCCAGCCTGGG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CAACAAGAGTGAAACTCCGTCTCAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAGAGAAGAAGTCCTTGTCTT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CTAATAAGATGTTGTTGGTTTCAGAGAGCCCAATCCAGGCACTTCAAACAAGGCAGGGAAATCAATGGCCCTGA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGAAAGTTTCTCTTCGACAAGCCCCTCCCTCCCTGACACTGGCATTCTGGCATTCACCCACCAGCCCCTCCGTC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CCTGACGCTGGCACCCTGGCATTCACCCACCAGCCCCTCCCCTCCCTAATGCTGGCACCCTGGCATTCACCCAC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CAGCCCCTCCCCTCCCTGATGCTGGCACCCTGGCATTCACCCACAAGCCCCTCCGTCCCTGACGCTGGCACCCT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GGCATTCACCCACCAGCCCCTCCCCTCCCTGATGCTGGCACCCTGGCATTCACTCACCAGCCCCTCCCCTCCCT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GACACTGGCACCCTGGCATTCACCCACCAGCCCCTCCGTCCCTGACGCTGGCACCCTGGCATTCACCCACCAGC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CCCTCCCCTCCCTGATGCTGGCACCCTGGCATTCACCCACCAGCCCCTCCCCTCCCTGATGCTGGCACCCTGGC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ATTCACCCACCAGCCCCTCCCCTCCCTGACACTGGCACCCTGACATTCACCCACCAGCCCCTCCCCTCCCTGAT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GCTGGCACCCTGGCATTCACCCACCAGCCCCTCCCCTCCCTGACGCTGGCACCCTGGCATTCACCCACCAGCCC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CTCCGTCCCTGACACTGGCACCCTGGCATTCACCCACCAGCCCCTCCCCTCCCTGATGCTGGCACCCTGGCATT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CACCCACCAGCCCCTCCGTCCCTGACACTGGCACCCTAGCATTCACCCACCAGCCCCTCCCCTCCCTGACACTG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GCACCCTGGCATTCACCCACTGTCTGGGGCAACTACCCTTTCCTCCCACCACTGATGGGACGGCACCCTGGCAC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CCTGGCCTACCAGTTTTGAGGGGAAAAAAATTAGAAATCTTTGGCCAAAGAGGGGACAAATTGAGCCTAAAATC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AAGCCTTGGTGTCTCACTTTTTAAATCTACTTTTACCTTTTGTGTATTGGTTGTGTGATTTTTTGTGTACTCAT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TGTGTATGATTGCTGAATACACAATGAATACACAAAAGCTATAAATAGATTTAAAGAGAGAAAGCAAACCAAAA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CCCATCGGTAATCCACTGGAAAAACAAGCCTCCAACTCTATTCAGAACATTGTCAATTAAAAGAAAAGAATTAA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GAATTTCCCTTTTAAACTATATTTCAGGATAACTCAATAACTCTAGTGGACAACAGCAAGTATTTTTGGTTTTT 2664
Query 1 -------------------------ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCG 49
|||||||||...|||.|.||||||.||||||||.|.|||||..|.||||
Sbjct 2665 GTTTGTTTGGTTTCTTTTTTTTGAGATGGAGTCTTGCTCTATTGCCCAGGCTGGAGTGCAATGGCACAACCTCG 2738
Query 50 GCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGG 123
||||||||||.||||||.|||..|.|.|||||.||||||||||||||.|.||||.|||||||||||||||||||
Sbjct 2739 GCTCACTGCAGCCTCTGTCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGACTCCTGAGTAGCTGGGATTACAGG 2812
Query 124 CACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTG 197
|.|.||||||||.||||.||||| |||||||||||||||||||||.|||||||||||||||||||||||||||
Sbjct 2813 CGCCCGCAACCAGGCCCTGCTAA--TTTTTTGTATTTTTAGTAGAGTTGGGGTTTCACCATGTTGGCCAGGCTG 2884
Query 198 GTCTCGAACTCCTGACCTCAAG---------------------------------------------------- 219
|||||.||||||.|||||||.|
Sbjct 2885 GTCTCAAACTCCCGACCTCAGGTGATCCACCCACCTCGGCCTCTCAAAGTGCTGGGATTACAGGTGTGAGCCAC 2958
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2959 CACACCCAGCCTGTTTGGTTGTTTTATTTAAGAGACAGGGTCTCGCTCCATCGCCCAGGCTGAAGTGCAGTGGT 3032
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3033 GTAATCACAGCTCACTGCAGCCTTAACCTCTTGGGCTCAAAGGATCCTTCTGCCTCAGCCCCCGAGTAGCTGAG 3106
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3107 ACTACGGGCGCGCACCACCACACCTGGCTAATGTTTTATTTTTTTGTAGAGATGGGGTCTTGCCATGTTGCCCA 3180
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3181 GGCTGGATTCAAGCTCCTGGCCTCTCTCACCTTGGCCCACAAAAGCTCTGGGATTACAAGCGTGAGCCACCGTG 3254
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3255 CCCAGCCTTTTTTGTCGTTGTTGTTTTTAACAGAACAATTTCAGCTACTCATTGTGAAGGAGATGAGATCATGA 3328
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3329 GAGAAACCATGATTTTGCCACCTCTCATGACATAAGTATTTCTCGCAAGGGTCATGGATGAGATCAGTAATGAC 3402
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3403 AAAACTAGGGCATCACAGGGTGGATCCGGGCTATGACCACCTGGACCCACGGGGCACACTTAGCATCACAGGGT 3476
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3477 GGGCCCAGGCTGTGGCCACCTGGACCCACGGGGCACACTTAGCATCTCAGGGTGGGCCCGGGCGATGGCCACCT 3550
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3551 GGACCCACGGGGCACACTTAGCATCAGAGGGTGGGTCCGGGCGATGGCCACCTGGACCCACAGGGCACACTTAG 3624
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3625 CATTACAGGTGCTTCCATGTGGCTCTCACAGCTCTGCCCACGAAGGCTTCTGGCAAAGAAAGATGAGCCTGAAT 3698
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3699 CTAAGGGCGTTTCTGCGGCACAGCTTCCATTTGCAGGAGACACGGGGCGAGGCGACACCACAGAGAGGCAAACA 3772
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3773 GCAGCGCGATAGGCCACACATTTGCAGGACAGCTGATCTGGTTTCTGCAACAAATCACAAGTGGTGGGAGGAGC 3846
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3847 AATGGGGGTCGGGGGCGGCGCCTGATCTAGAGTAAGAGAGGTTCAAGAGGCGCCACCACAAAACTTAAACTTTG 3920
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3921 GGCCTTGTTAGGAACCTGTGTGTTCCATCTGATGGACGTAAGCAAACAATCAGGGGAATGTGATTCTGGATGGG 3994
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3995 GCCTGAGCGGGTGCCAAGGAATGACTGTTAATTTGAACATTGCCCTAAGGGAACCGCAAGTGTGTTCCAGAGTT 4068
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4069 TCCCGTACTTGGCGCCTTGCAACCTGAAGTTCATAGGAAGAAAATTTCAGAACGTTTTTGCTACAGGATGGAAA 4142
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4143 GTGCTTCAGCCACAGGGGAAAAGCAAAGAGAAAGACAACAGCAATGCATGAAACAAGTGTGGCGATTATCGATA 4216
Query 220 --------------------- 219
Sbjct 4217 AAGTATGTGTGGTGATCACTG 4237
