Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12783
- Subject:
- NR_109965.1
- Aligned Length:
- 1936
- Identities:
- 189
- Gaps:
- 1721
Alignment
Query 1 ------------------------------------------------------------------------AT 2
|.
Sbjct 1 AAATGAATTTTTGGGATGGTACAAGGTAAGAGTCAATGTTCCCTCTCTCTCTCTCCTTTTTTTTTTTTTAAGAC 74
Query 3 GGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGG 76
|||||||..||||||.|.||||.||||||||.|.|||||..|||||||.|||||||||||||.||||| |.|||
Sbjct 75 GGAGTCTTGTTCTGTTGGCCAGGCTGGAGTGCACTGGCACAATCTCGGTTCACTGCAACCTCCGCCTC-CCAGG 147
Query 77 -TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTT 149
||||||||||||||||||||.||||||.|.||||||||||||||||||.|||||.||||.||||.|||||
Sbjct 148 TTCAAGCGATTCTCCTGCCTCAGCCTCCTGCGTAGCTGGGATTACAGGCGCACGCCACCACGCCCAGCTAA--- 218
Query 150 TTTTTGTATTTTTAGTAGAGATGGGGTTTCACCAT----GTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG 219
|||||||||||||||||||||.||||||||||||| ||||||||||.|||||||||.||||||||.||..|
Sbjct 219 TTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGTTGGCCAGGATGGTCTCGATCTCCTGACTTCGTG 292
Query 220 -------------------------------------------------------------------------- 219
Sbjct 293 ATCCACCCACCTCGGCCTCCCAAAGTGTTGGGATTACAGGCGTGAGACACTGCACCCAGCCCTCTCTTAATTTT 366
Query 220 -------------------------------------------------------------------------- 219
Sbjct 367 TTTAACATACAGATAGCCAGTTCTTTCCTGATTTGTAAGTTTTTATTTAAACCAGAGTTAGAAAAATAATTAAA 440
Query 220 -------------------------------------------------------------------------- 219
Sbjct 441 ATAACACTACCTCTAAACACTCAAAACCACTGCTATGACATAATCCTGCCATTTCAGTAGAACAGAAAATCCCC 514
Query 220 -------------------------------------------------------------------------- 219
Sbjct 515 ACGCCTTCCCCTCAGCTCGGAGGGCACAGGACTGGGCAGCAAGCTCCACCAGTTTGTAGAAGGAGTTCAACTTC 588
Query 220 -------------------------------------------------------------------------- 219
Sbjct 589 CAGACAGCAGGGAAATGCCTTTCTCTGAAGTTATTACATGAGTTCACACTGAAGGGAAAGAAGAAAGTGAGCCT 662
Query 220 -------------------------------------------------------------------------- 219
Sbjct 663 TATCATTTTCCCAAGATGCTGTGAGATGTGTTGGATTTACTCTCACTCATAATTGTGCAGGATGGTTGTTTTGT 736
Query 220 -------------------------------------------------------------------------- 219
Sbjct 737 TTTGTTTTGAGGCAGGGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGTGTGGTCTCAATTCACTGCAACCT 810
Query 220 -------------------------------------------------------------------------- 219
Sbjct 811 CTGCCTCCAGGGTTCAAGCAATTCTCCTGCCTCCGCCTCCCGAGTAGCTAGAGTCACAGGTGTGCACCACCATG 884
Query 220 -------------------------------------------------------------------------- 219
Sbjct 885 CCTTGCTAATTTTTGTATTTTTAGCAGAGATGGGGTTTCATCATGTTGGCCAGGCTGGACTCCAACTCCTGACC 958
Query 220 -------------------------------------------------------------------------- 219
Sbjct 959 TGAAGTGATCCGCCCCCCTCAACCTCCCAAAGTGCTGGGATTACAGACGTGAGCCACTGTGCCTAGCCACAGGT 1032
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1033 ATGTTCGGGATGGTTTCAACCAACATCAATAGAACCAACTAAGAATAGATGGCCTTCAGCAACACAGAGGGGTA 1106
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1107 GCACAGGAGTTCCAAAGATCAGTAGTTTGAAAATCAGGTCACAGGGAGTCCACGCTATATGATCTTGGGGTCTC 1180
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1181 ACTTTGTGGCCCAGCTGGAATACCGTGGTGCAAACACGGTTCACTGCAGCCTTGACCTCCCAAATTCAAAGATG 1254
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1255 AGGTTTCACCATGTTGCCTAGGCTGGTCTCAAACTTCTGACATCAAGCAATCTGCCCACCCTGGCCTCCCAAAG 1328
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1329 TGTTGGGATTACAGCTGTGAGCCACTGCACCCGGCAAATAATCTTTTTAAAACAGATTGTGATTCCGCAGGTCT 1402
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1403 GAGGTGGCGTCTGAGATTCTGCATTCCTAATAGGCTTCCAGAGACAGCATCTCACCATGATGCCCGACTAGCCT 1476
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1477 TGAACTCCTGGCTTCAAGTGATCCTCCCCATTCGGCCTCCCAAAGCGCTGGGATTATAGGTGTGAGCCACCATA 1550
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1551 ACAGGCCCAAAAGTAACATCTGATCAAAAATCTCAAGGTGATGCGGGAACAAGCCATGAGGCTACTCAGGGAAA 1624
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1625 CGTGCTCTAAATAGAAGGAATAACAAGTACAAAAGCCCTGATATGCGAGCTAAGGTGCTCAGGGACAACAAACA 1698
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1699 AAGCCAATATGGTTGGGGTAAAACAAGCAAGGGAGAGAAGAGAAGCAGATAAAATAAGAGTTACAAAGCAGTTC 1772
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1773 ATGTGGGACTTTGTAGACGAGTATAAGGACTGTGGCTTTTTCAGTGAATGAGAATAACTGGCAGGTTCTGAGCA 1846
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1847 AGGAGGGATATGACCTGATTAATTTTAAATGGATAATGTAATCGTGTTTAAACTCAAAAAGCTGAATTAAACAC 1920
Query 220 ------------ 219
Sbjct 1921 CTGTTCCATCTC 1932
