Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12783
- Subject:
- NR_110049.2
- Aligned Length:
- 2319
- Identities:
- 188
- Gaps:
- 2103
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGGAAAACGACAGTGTCCGGAAGCCTCTGCAATGCCCTCTTAGGATTGTCCAAGAAGATGGCGAAACATTTGCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCAGCGATAGGAGTTGAGGGAATGTGCGGGCTGAAACTAAGTAGAGACGGGGTTTCGCCATGTTGGCCAGTCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGTCTGGAACTCCTGACCTCAAGTGATCCGCCCTCCTCGGCCTCCCAAAGTGCTGAGATTACAGAAGCTGGAGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCAATAGTGCAATCTCAGCTCACTGCAACCTCCACCTCCGGGTTTCAAGCTATTCTTCTCCCTTAGCCTCCCAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GTAGCTGGGATTACGGGCGCCTGCCACCACACCCAGGTAATTTTTGTATTTTTAGTAGAGACGGGTTTTCACCA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGTTGGTCAGGCTGGTCTCGAACTCCTGACCTTCAGATGATCCACCCGCCTCTGCCTTCCAAAGTACTGGGATT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AACAGGCGTGAGCCTCCACACCCAGCAACTATTGCATTTTATTTTACTGTATGTATGTAATACCTTAACCACAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACAAAAAATTACCTTGTTCAAATTTTCCAGAATTAGAATTCTACCAGTTCCCCAAAGTCTTGCTGTTTCTCCAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCCCCTTAGCCCTTACCAGCTGCTAGAGCTGTCTTTTCATCCTTTGCACCCTGGCACACTCCTACTCATCCCTC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGAACCCAAATGTCACCTCTTATCTCTAAAATGTTCCTTGACATCCTTCTGCCAAATACTAGCCCCTTCCTCTC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGTTTACAATGCAGATTCGGTCCTAGTGAATTACTGTTATTTTCTACTCTGCCTCACTCATGAAGGCACAAGAC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TTGATTTACATACGCTGTCCTCTTCAGGCCCTGCCACAGGGCCACAGAAGGACCTCACACATTTCATGTCAATT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GAGGTCACTGGACTGACCTGGGAATGAGGAGCCTGGGTTGTTACTCCACTTTTGCACATAGATGTGTGACCTTG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ATTATTTTCCACCACGTCCTGGCCTCGGTTTCCTTATCTGTTAAAAGGGAATGACACCACAGGCCTTGCAAAAT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGAAGGGATTATTTCTTTGAAGACCAACAGGCGATAGGGGGCAGTAGTGTCCCAGGATCCAGTTTCCCGCTTCA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GGTTTCAAGAAACAGGAGCAGCTGCAGTGATGAAGTTTTCCCGACTATGACAGTGTACAGTTGACCTTGAACAA 1184
Query 1 -----------------------------------------------------------------ATGGAGTCT 9
|||||||||
Sbjct 1185 CGTGGGGGTTTGGGGCACCGACCCCTGCACAGTCCAAAATCCTGGGGTCTTTTTTTTAATTTGACATGGAGTCT 1258
Query 10 CATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCG 83
|..|||||||||.||.||||||||.||||||..||||||.|||||.|||||||||||||||.||.|.|.||||.
Sbjct 1259 CCCTCTGTCGCCAAGGCTGGAGTGCAGTGGCGCGATCTCAGCTCATTGCAACCTCTGCCTCCCGGGTTGAAGCA 1332
Query 84 ATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTA 157
|||||||||||||.|||.||..||||||||.||||||.|||.|.|||.||||||||||||||| ||||||||
Sbjct 1333 ATTCTCCTGCCTCAGCCGCCCAAGTAGCTGAGATTACGGGCGCCCGCCACCATGCCCGGCTAA---TTTTTGTA 1403
Query 158 TTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG------------ 219
|||||||||||||.||||||||||||.||||||||.|||||||.||||||||||||||||.|
Sbjct 1404 TTTTTAGTAGAGACGGGGTTTCACCAGGTTGGCCAAGCTGGTCACGAACTCCTGACCTCAGGTGATCCACCCGC 1477
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1478 CTCGGCCTCCCAAAGTGCTGTGATTACAGGCATGAGCCACTGCGCCTGGCCTCATTTTTGACTCCCCAAAAACA 1551
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1552 ACTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTTTTGCTCTTGTCGCCCAGGCTGGAATGCAATGGCACGATCT 1625
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1626 CGGCTCACTGCAACCTCCACTTCCCAGTTCAAGCAGTTCTGCCTCAGCTTCCTGAGTAGCTGGGATTACAAGTG 1699
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1700 CCCACCACCACGCCTGGCTAATTTTTATATTTTTAGTAGAGACTGGGTTTCGCCATGTTGGCCAGGCTAGTCTC 1773
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1774 GACTCCTGACCTCAGGTGATCTACCCGCTTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCGCC 1847
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1848 CAGCCCAAAAACTTAACTATTGACAGCATACTGTTGACCAGAAGCCTTACCAATGACAGTTGATTAGCATTTTG 1921
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1922 TTTGTTTGTTTTTCGTTTTTGTTTTGAGATGGAATCTCGCTCTGTTGCCCAGGCTGTAGTGCAGTGATGTGATC 1995
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1996 TCGGTTCACTGTAACCTCTGCCTCCTGGGTTCAAGTGATTCTCCTGCCTCAACCTCCCAAGTAGCTGGGACCAC 2069
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2070 AGGCACCCGCCACCATGCCAGGCTAATTTTTGTAGTTTTAGTACAGATGGGGTTTCAACATGTTGGCCAGGGTG 2143
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2144 GTCTCGAACTCCTGGCCTCAAGTGATCCACCCACTCTGGCCTTCCAAAGTGCTGGGATTACAGGCATCAGCCAC 2217
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2218 TGTGCCTGGCCAATGACAGTTGATTAGCATATTTTGTATGTTATATATATTACATGCTGTATCCTTACAATAAA 2291
Query 220 ------------------------- 219
Sbjct 2292 CCAGAGAAAAGAAATTGTTATTAAG 2316
