Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12783
- Subject:
- NR_110064.1
- Aligned Length:
- 2292
- Identities:
- 188
- Gaps:
- 2075
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGCTGAGACAGATTCCCTAAGAGGTATATGGAAGACTCTTGAAAATAAAGGACAGAAAAGCCTTAGGAAATACA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GATGCATTCAGGAATCAGTACGACCAATACATATCATCTTTAAGGTTTTAAAAAGAAAGCCAGAACATGTATTT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTCTTGCTTATCCCAGGCAGGATCTAAATATGCAAATATGCCACTTTTCTACAAGATAACTCACTGTGAGTCAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTGCAGGACAGACACAATACAATGGAGCCCGAATTTCTCAGGCAAAGAAATGTGGATATGGACATCTAAGAGCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTTAGAATATAATTTCAAAGGCAGGACTGATTCTGTGAAAAGCCATCAAATGTACTGTCTGACAGCTGTTCCTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCCAGCAAATGAACAGGATACCTACGACACGGTGACTACCATGTCATCAGGGCCATGAGATGTACAGAGTTGAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CAGGAAGCAACAGAAATGTAACTCAAAACCTCAAAACAGAAAACCACGTAGCCTATGACAGTGGTCGCTGGAGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ATATATTTTACTCTTGCGGATTAGAAAAAAATCTCAAGCCGTCAAAGATAGAAAAGAAAAACTGGGGAAAACAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGAATTGAAATCAACATATAAGAGACAAGACTACAATTGCTACATTTATAGTATTAGAAGGAAAAAAAAAACAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TTCAAGGTGAGGGAAAAAAAACTGGATCAGAGTTCAGAAATCCCTCCAGGGCATGAGCAAAATGAAGTGAGAGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTCCTAGGTAGGAAGATAATACCATGCCTGAAGTTAGCAAAGTTCTAGACGTGATATAACAGAGATATCATGCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GTTGAAAAACAATTCCTGGGGTCACGTCATACAGATGGTTGCCCCACACCGCTCCAGGAATTCAAACCAAGACG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GCATTCTGGGGGAGGCTGGACAAGGAACAAATGGCTCTGTTGTAAAAGTTAAATGAGATTCCATGCCTGCCACT 962
Query 1 ------------------------------------------------ATGGAGTCTCATTCTGTCGCCCAGAC 26
.||||||||||.||||||.|||||.|
Sbjct 963 CCAATGGCTCAGGGCACACCTCTAACTATTTTTTTTTTTTTATTTGAGGTGGAGTCTCAGTCTGTCACCCAGGC 1036
Query 27 TGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCGATTCTCCTGCCTCGGCC 100
||||||..|||||..|||||||.|||||||||||.||||||||||||.|.|||.||.|||||||||||||.|||
Sbjct 1037 TGGAGTCCAGTGGTGTGATCTCAGCTCACTGCAAGCTCTGCCTCTCGGGTTCACGCCATTCTCCTGCCTCAGCC 1110
Query 101 TCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGG 174
|||.||||||||||||.|||||||.|.|.|.||||.|||||||||| ||||||||||||||||||||||||||
Sbjct 1111 TCCCGAGTAGCTGGGACTACAGGCGCCCACCACCACGCCCGGCTAA--TTTTTTGTATTTTTAGTAGAGATGGG 1182
Query 175 GTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG----------------------------- 219
||||||||.||||.||||||.|||||||||.|||||||.|||..|
Sbjct 1183 GTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGATCTCGTGATCCGCCCGCCTCAGCCTCCCAAAGTGCT 1256
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1257 GGGATTACAGGGGTGAGCCACCGTGCCTGCCCCAATTTGTTTATTTTTAATTGGTCCTCAGCAGCATCACCATA 1330
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1331 GGAATAGGAAAAACTAAAGTGGACCTGCGTCAGGACACCATCATCCACAAAAACCCAGCCTTGTTCCCTCAGGC 1404
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1405 TGCAACGGGCAGTAGGTTGGGGGACTACTTTAACAAGGGAAAACGATGGCAACAACGGACAGGCAAAATCTCCC 1478
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1479 ATGCTTTCTGAGGAAATAGACGTAAAAAAAACATGGAAGAAAATATTCATTAAATTTTTGTGTCTTAGCAATTG 1552
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1553 CAGATATAAATTAAGGTGCATTTAAAATGCCACCTTAAGATGTCTGATGTGTCCTGGGTGGGATGAGTGTATGC 1626
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1627 ATGTATCGCACCTTGTATTATGTAATGACTAGGCTGCTTGGTTCTACTGGAATATTCTGCCACACCCGTATTCA 1700
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1701 ACATCCAACAGATCTGTACTGAACACCTGCTGTATACATGGAATGATTCTAAGTCCTGGGGATAGAACAGTGAA 1774
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1775 TACAGCAGACAAAATTTCTGCCTTCATGGAACTTATATTCTTATTAGCAAGATAGAAAAAAATGTACAATATAC 1848
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1849 ATCCTATATAAGCACTATAGAGAAAATAAAGAATATAGCAGGGTAAATTAAACCACTTGTGATAGGAGCAATAT 1922
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1923 TTGAGATAGGTCACTTAGACAAACCCTCTCCGAGAGGAATTGAGCCATGATACATATACCACCGTATATAAATA 1996
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1997 CTATCTAGGACAGAGGGAATAGCCAGGGCAAAAGCCCCTGTGCTTATTATATTCAAGAACCACTGTGAGGCCAA 2070
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2071 AGAAATGACAGACACTTGGACCAGCATGCTGTCCATGGAGTTGTGAGAAGTGTTTAGTAATAAGTGAAATACAT 2144
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2145 TTTGAAGGTAAAGTTGGCATAGCATGACTTCTTTCTTTCTAACCCAGAAACCCCACACACCAGATTTCCTTTCT 2218
Query 220 ------------------------------------------------------------------------ 219
Sbjct 2219 CATATGGACATTTGTGACAGGCTCTCTAAATTGAATCCCCTTAGGCTATTAACTGAAAGGAGCATGGTGCTT 2290
