Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12783
Subject:
NR_110375.1
Aligned Length:
1986
Identities:
189
Gaps:
1772

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TGTTGGGATTATAGGGGTGAGCCACCCTGCCCAGCCTGCTCCAGCAAATCTTAAATATCCATGCACACTGAATA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AACATGCACCTGAAACAGGTGCACGTTTCAGGAAGTGAATGGAACTCTCCAGGAGAGTTTGGGTCCCATCATGT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GTACCTTAGAAACAGAAGTCTCAAAAGTCTCAACAACATCCACAAAAACATCTGCATCTGTTTTCCAGATACTT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GCAACCAAAAATAAAACTTCACAGGAACACTACACAAGAAGTGGTAGACAGCTAAATCTTCTCCAAACTGAGAC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CTGGACCATAAGGTCTTGGTTGTAGCAGGTCTGGCAGGGGTTATCTATAAACCTGCACGCAGGGCACTGTGAGC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GGGTTGCCAGGGTACATCTGTGGCCAGGTAAGGGCCACAGAGACAGTCGTGATCCCCAGCAGCTTCAAAGCTGC  444

Query    1  -------------------------------ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATG  43
                                           |||.|||||...|||||.|||.||.||||||||.||||||.||
Sbjct  445  AAAATGCTGGGCTTTTTTTTTTTTTTTTAAGATGAAGTCTTGCTCTGTTGCCTAGGCTGGAGTGCAGTGGCGTG  518

Query   44  ATCTCGGCTCACTGCAACCTCTGCCTCTCGAGG-TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGA  116
            ||||||||||||.||||||||..|||| |.||| ||||||.|||||||||||||.||||||.|||||||| |||
Sbjct  519  ATCTCGGCTCACCGCAACCTCCACCTC-CCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCT-GGA  590

Query  117  TTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGA-TGGGGTTTCACCATGTTGG  189
            .|||||||||.|.|.||||||||.|.||||   ||||||||||||||||||||| .||||||||||||||||||
Sbjct  591  CTACAGGCACCCACCACCATGCCTGACTAA---TTTTTGTATTTTTAGTAGAGACGGGGGTTTCACCATGTTGG  661

Query  190  CCAGGCTGGTCTCGAACTCCTGACCTCAAG--------------------------------------------  219
            ||||||||||||.|||||||||||||||.|                                            
Sbjct  662  CCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCCATACTCCTCGGCCTCCCAAAGCGCTGGGATTACAGGCA  735

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  736  TCAGCCACTGCGCCTGGCCTAGGGCTTTCTTTTTTAAAAAACAAGTCCTAACAAAAGGGGGTTTCTACCAGCCC  809

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  810  CTGAGCCACACCTTCTGAAACTCCCTTGCCCAGGATCCCCACAGCTGTCCACCTCGCAAGTCCCACTCTCTGCC  883

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  884  CACAGAGACTGCCTAAAAGGAGGACACAACAGATTTCAGATAAAAAGCACCTGTGTATCGTAAATATTTCAGGA  957

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  958  AAAAGAATTCAGATCTTTTCAAAGGCTTGCTTATTGCTGCTAATTGTTCCTGAGGATCTTTCTAAGCAGCAATA  1031

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1032  TACTTGAGAATATTAGCTGCTACTGTTTGTTTTCCCTCTAAGGTCCTGAGGAAATCAAAAGAAAAAAAAAAAAA  1105

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1106  CCCTCAAGGGTATAGCTTTTGTATATAGCCCTAGTGAGCAAACTGCAAATTGGGACATGCAGTAGATTCTGGAG  1179

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1180  CAATCTCCAATCCTTACCAGGTACTTCCTGGCATCAAATCCCCAGGACATTTCTTGGCCCCTCCTTGCATTTTC  1253

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1254  CGTTTCAAAATGTTGAGGTTAAAATACATCGAAGCACAGAGGGAAGAAAATCTCAGGTCTTCTAGAAATGGCGA  1327

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1328  TGTCTTCATTTAAAAATAGGACTGATGGGGGCTTGGCAGGGGTCTCTAGGATCCAAAAGAGGTTGAGTTGCATC  1401

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1402  CTGCAGCCCAACTGTCCACATTTAGAAGTGACAACATTCATGAACTAAGTCAACATCCACCAAAAATAACATGA  1475

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1476  AATAAAGCTCACAGTTTGGGAACATGAAAATAACGCACACAGACCTCACCCACCAATCCCTAAGCTGTGAAAAC  1549

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1550  AAACGCTCGCATTTAAACTTTTCTCAAATGTCAAATTAGCATATTCTTCCCCTCCATGTAAAGTTTTAATAAAC  1623

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1624  TTGACTCAATCTGCCTTTATTAAAAAACCTTACAAAAGATGTATTTAAATGCTTGAAAAAATTAACTTTATGCT  1697

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1698  CTATGCACAGATAAATTTCTCTTACTGTACAACTAAATATGGTTATATCCTTTGTTTAAAAAATATTTTTTCCC  1771

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1772  CCACTAATTACACTTCGTGTGTAGTTCCACGTCAATGATCTTTCCGCTCTTCTGGGAATGTGTCCTAAGAGCTG  1845

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1846  CCGGGTGGGTGGAAATAGCCCTACACAGCGCCACTTTCTTGCTCAGTCGTGTTTATTAAGATTGTTTGGGGTTT  1919

Query  220  --------------------------------------------------------------  219
                                                                          
Sbjct 1920  GGGGTTTTTTTCCTCCGTTTTCGTTTTCTGAGACAGCGTGCTGGTAACTGTGGACCCGCCCG  1981

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