Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12783
- Subject:
- NR_110386.1
- Aligned Length:
- 3005
- Identities:
- 190
- Gaps:
- 2790
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGCCTTTGATGGGGAGAGTCTGAGATGGGACCCAGGAACATCACCATGAAGCTGTCCAGGATGGATGTGGGACC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCTGTCAGACCAGGCCAGTTCTCTTAATGTAAGATCAGCAGGCCAAGGTCCTGGGATATGGGAGCTCCCAGGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGTGGACTGGGATGCCTGAGGGATCCAAGAATTAGCAGTGTCCTGTGTGGTCTCGCTGAGGGAAGCCAGGCAAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATCTAGCGGCTCAGCTGTAACAGCCGGAGCTCTTGGCTCCCAAGCAACAGGAAACAATTCTGGCTTATTTAAGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGAAAAGGACTTTATCAAAAGGATCTTGGGGAACTCACAAAATAACCAAGAGGGCTGAAGAATACAGTTGGTGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTCGACCAAGGAGGCTGCACAGCAGTCAGGACCACAGCCAAAGTCAGGCAATCCAGGGATGACCTCGCTGCCAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATCCAGGACTCCCTGGCATACACTGCCACCTTGGGACGTGGATATGGTCCCTGTCGCCCCAGGAACTGGAATGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CATTGACTTGGCGACTGCCACCATCCACCAGAATGGACTTCTGTGCTCCTTGCATCTCTGTATTATTAGTTCCC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AACTCCAAGCCTTTGATGGGGGCATCTGATGGATTGAGCCTAAGGATTCTGATGGTGCCTGTTGGCTGCTTCCG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGATGTCTGGAGTTGCAAAATGTGCCAGAAAGCAGAAGGATACACCGCTATTCAGAGAGGATTTTCTTAGGGAC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TTGAAGAAATTGACCTCAAAATTTCAGTAGATGAGAGGACTGTGGCTGGCCTGTGTCTTTGGCACTGGTTGTTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GAGCCCAATGAAAAATTCTACATTGAAGACTAAGGGAAAAAGAGGTTTCATTATAGAGCTGGGACTGATTGCAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTTCAAAAGGTGGCTGCAACAATATCCCACACACTTTTCTGCTGTATAATCTGCCACTTCTCCATCAAGTAGAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GAGACAATTTCTCCCCTCCTTTGAATCTGAGTGAGTTCTGTGACTGTTTTGACTGATAGAATGATGTGGAAGAC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGACTGTGTGACCTGAAAGGTGAGGTCACAGAAAGCCTTGCAACTTCCACCTGGCCTGTGAAGAACACTTGCTC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TTGGGATACTCCTTCTTGGAACCCAGCCACCATGCTGTAAGAAGCCCAATCTACATGCAGACACCACATATAAG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GCATCGTAGTCAACAGCCACAGTTAAGTTCCCAGCCGGCAGCCAACATCAACTACCAGTCTTGTGAGTGAGCTA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCTTGGACATCCAGCTTGGTTAAACCTTCAGATGACTCCAGCCCCAGCTGACACCTGACTGCAACCACATGAGA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AACCAGGAATGAAAATCCACCAGCTGAGCCCAGTCAACTCATAGAACTGTGAGAGATAATAATAAGTTGTGGTA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CTAAGCCACTAGGATTGGGGCACCATGCAATAATAGGTAACCAAGACAGTAGCAACTTTGGTTAGACACATGAG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CCATGGGATGACACATAATTAGGTATATTTTTAAAAACTTGGATTCAGCTTTAGGGCAATGTGTCCCTAACATA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GAGAGGCACTATTTCAGTTCACATCTGCTGCCTCTGATCAAAACACTCTCTTGCACTTCCAGAGAGAGAGAGAG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AGAGAGCAAATGTGTGTATTTACTGACAGGTGTCCCTTTGTGTCCCCATCTGTGTGACTGTGGAGCTCAGTGTC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TCTCACACATTCTAGTATGATACTTGGTGCCATATTTGCAGGTCCTGAGGTAAGAACCCATGCTGTTGTCTTCA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GAGAGTTTCATGGGTTGGACTGTGCCATATATGGGCAAAAATCCACCCACACGTTTTCTTTTAATCACCTTTAT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GGATGTATAATTTACATATATACTTTTTTCTTATTACTTTTTATTTATGTAATTTATTCATTTTTTGAGATAGG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GTCTCACTCTCTTGCCCAGGCTGGAGTGCAGTGGAGTGATCATGGCTCACTGCAGCCTTGACCTCCTGGGCTTA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AGCAATCCTCCCACTTCAGCCACCTGAGTAGCTGGGACCACAGGCACACACCACCACTCCTGGCTAATTTAAAA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AGTTGTTTTTTTTTTTTTTTTTGTAGAGACAGGGTCTCACTATGTTGTCAAGGCTGGTCTCAAACTCCTGGGCT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CAAGCGATCCTAGTGCCTCAGCCTTCCAAAGTTCCGGGATTACAAGCATGAGCCACCATGCCTGGCATCTTTTG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TGGATGTGTAATTTACATACGTACAATAATATGTACCTATTTTAAGTATACAGTTTGATGAGCTTTGACGAATG 2294
Query 1 ------------------------------------------------------------ATGGAGTCTCATTC 14
|.|.||||||..||
Sbjct 2295 TAGCCCACGAAACCACCACCATAATCGAAGTATAGAACTTTTTTTTTTTTTTTTTTTGAGACGAAGTCTCTCTC 2368
Query 15 -TGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGG-TCAAGCGATT 86
||||.|||||.||||||||.|.||||||||||.||||||||||.|||.||.||||| |.||| ||||||||||
Sbjct 2369 TTGTCACCCAGGCTGGAGTGCAATGGCATGATCCCGGCTCACTGAAACTTCCGCCTC-CCAGGTTCAAGCGATT 2441
Query 87 CTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTT 160
||||||||||.||||||.||||||||||||||||||||||..||.||||.||||.||||| |||||||||||
Sbjct 2442 CTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCTGCCACCACGCCCAGCTAA---TTTTTGTATTT 2512
Query 161 TTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG--------------- 219
||||||||||..|||||||||||||.||||||||||||||||||.||||||||||||.|
Sbjct 2513 TTAGTAGAGACAGGGTTTCACCATGCTGGCCAGGCTGGTCTCGAGCTCCTGACCTCAGGTGATCCCCCCTCCTC 2586
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2587 GGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACTGCGCCCGGCCTATAGAACATTTTAATCACCCCAGAG 2660
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2661 ATGTGCCCCCTGTGCAGCCAGTTCCCTCCTCTCACCCCCCAGCCCCTGGCAAGCATTGATTTGCTTTGCCACTA 2734
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2735 TCAATCAATTTTTGTCTTTTCTGGTATTTCATATGAATGGAATCATATAGGATAGATTTTTATGTGACTACACA 2808
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2809 CTATTTTAGCATAATATTTTTGAAGTTCTTCCATGTTGTTGTGTATATCTATAGTTAATTTCTTTTTCTCACTG 2882
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2883 AATTGTATACCACTGTATGATGTATCACAATTTGTTTATTCATTCTCCCGTTGCTGGACATTTGGACTGTTTAT 2956
Query 220 --------------------------------------------- 219
Sbjct 2957 TGTTTGGGGCTACTATGAATAAAACTGCTATGGATGTTTATGTAC 3001
