Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12783
Subject:
NR_126051.2
Aligned Length:
4390
Identities:
188
Gaps:
4178

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGATTGGGGCCTGTGGAGGCCGCACTAGGATCGTAGAAGGAGTGGAGCCGTGCTCTCACCCTGTCTTAGAGGAC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCGGAAGCGCCAAGTGACTGAGGGCCGAAGACACTCACCTGTGGAGCCTGTGCACGTAGGTAGAGGCGGCGGCT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CTGAGTCCAGGAGCTCCAGTGGGCAGCTCCCCAGCACCAGCCATGAACTACGTGGGGCAGCTGGCGGAGACGGT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GTTTGGGACGGTGAAGGAGCTGTACCGGGGCCTGAACCCAGCCACACTGAGCGGCGGCATTGACGTGCTGGTGG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TGAAGCAGGTGGACGGCTCGTTCCGGTGCTCACCCTTCCACGTGCGTTTTGGCAAGCTGGGCGTCCTGCGGTCG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CGGGAGAAGGTGGTAGACATTGAGCTCAATGGGGAGCCTGTGGACTTGCACATGAAGCTTGGGGACAGCGGGGA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GGCCTTCTTTGTTCAGGAGCTGGAGAGCGATGATGAACATGTGCCTCCCGGCCTGTGCACCTCACCCATCCCTT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GGGGGGGTCTGTCTGGCTTCCCCTCGGACTCCCAGCTGGGCACTGCCAGTGAGCCTGAGGGCCTCGTCATGGCA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GGCACGGCCTCCACTGGGCGGAGGAAGAGGCGTCGCAGGAGGAAACCCAAGCAGAAAGAGGATGCAGTGGCAAC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TGATTCTAGTCCAGAGGAACTGGAGGCAGGCGCTGAGAGTGAGCTATCCCTGCCGGAAAAGCTGAGGCCAGAGC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CCCCAGGCAGTGTCCAGTTGGAAGAGAAGTCTTCACTGCAGCCCAAAGACATCTACCCCTACTCGGATGGCGAG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TGGCCCCCCCAGGCCAGCCTCTCAGCAGGTGAGCTAACATCCCCTAAGAGCGACTCGGAGCTGGAGGTGCGGAC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CCCGGAGCCCAGTCCCCTAAGAGCCGAGTCCCACATGCAGTGGGCCTGGGGGAGGCTGCCTAAGGTGGCCAGAG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CTGAGCGGCCCGAGTCCTCAGTGGTCCTTGAAGGCAGAGCTGGGGCAACCTCTCCTCCTCGGGGAGGACCCAGC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  ACTCCCTCTACCTCTGTGGCTGGCGGCGTGGACCCTTTGGGACTCCCAATCCAGCAAACAGAGGCTGGTGCCGA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CCTTCAGCCTGACACAGAGGATCCCACTCTAGTGGGTCCCCCTCTCCACACCCCAGAGACAGAGGAAAGCAAGA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CTCAGAGCTCTGGGGACATGGGCCTCCCTCCTGCCTCCAAGTCATGGAGCTGGGCCACTCTGGAGGTTCCAGTT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  CCCACCGGGCAGCCAGAGAGGGTCTCCAGGGGGAAAGGCTCCCCAAAGAGAAGCCAGCACCTGGGCCCCAGTGA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CATCTACCTGGATGACTTGCCCTCCCTGGACTCTGAGAATGCAGCGCTTTACTTCCCCCAAAGTGACTCTGGGC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TGGGGGCCAGAAGATGGAGTGAACCCAGCAGTCAGAAGTCCCTGAGGGACCCCAACCCTGAACATGAACCTGAA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CCCACTCTGGACACAGTGGATACAATAGCACTGTCCCTCTGTGGTGGACTGGCTGACAGCCGGGACATCTCCCT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  AGAGAAATTCAACCAGCACAGCGTCTCTTACCAGGACCTCACCAAAAACCCCGGACTTTTGGATGACCCAAACC  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TAGTGGTGAAAATCAATGGAAAGCATTATAACTGGGCTGTGGCTGCCCCCATGATCCTCTCCCTGCAAGCCTTC  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  CAGAAAAACTTGCCCAAGAGCACCATGGACAAGCTGGAGAGGGAGAAGATGCCCCGGAAGGGTGGGCGATGGTG  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  GTTTTCCTGGCGACGCAGGGACTTCCTGGCCGAGGAGTGCCCAGAAGGAGAAGACTGCAGCCAAGGAGCAGCAG  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  GGGGAGAAGACAGAAGTCCTGAGCAGTGATGACGATGCCCCAGACAGCCCTGTGATCCTGGAGATCCCCTCCTT  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  GCCACCCTCCACTCCACCCTCCACTCCTACCTACAAGAAGTCCCTCCGCCTCTCCTCCGATCAGATCCGGCGCC  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  TGAACCTGCAAGAAGGTGCCAATGATGTGGTCTTCAGCGTGACCACTCAGTACCAGGGCACCTGCCGCTGCAAG  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  GCCACCATCTACCTGTGGAAATGGGACGACAAGGTGGTCATCTCTGACATCGACGGCACCATCACCAAGTCAGA  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  TGCTCTGGGCCATATCCTGCCCCAGCTGGGGAAAGACTGGACACACCAGGGCATCACCAGTCTCTATCACAAAA  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  TCCAACTAAATGGGTACAAGTTCCTGTACTGCTCGGCGCGGGCCATTGGCATGGCGGACCTCACCAAGGGGTAC  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  CTGCAGTGGAGAGGTGATCGAGAAGAAACCAGAGGTGTTCAAGGTCGCCTGCCTGAGTGACATCCAGCAGCTGT  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  TTCTGCCCCACGGACAGCCCTTCTATGCTGCCTTTGGGAATAGGCCCAATGATGTCTTTGCCTACCGGCAGGTG  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  GGCCTGCCTGAGTCACGCATCTTCACAGTCAACCCCCGGGGAGAGCTCATCCAGGAGCTCATAAAGAACCACAA  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  ATCCACGTATGAGCGGCTTGGTGAAGTGGTCGAGCTCCTCTTCCCACCTGTGGCCCGTGGCCCCAGCACAGACC  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  TGGCCAACCCTGAATACAGTAACTTCTGCTACTGGCGGGAGCCACTGCCTGCTGTGGACCTTGATACCCTGGAC  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  TGAACCTGCCCTGGCTGGCTCCTCCTCCCTGGCCCGGCCCAGGACTGGCTAGGTGTCCTGGGGTATAGGAGGGT  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  GGGAATTGGAGTGTCATGGGGCAAACCCACTGAAGGGGAAGGAGGAGGCTGCAGGTTGGTTGGCAGCTAGAGAG  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  ACTCCCCCATCTTCCCCGTCATATTTTTGCCAGCTAAGCTGCAGCTGCTCCAGGCGTCAGTGTGGCACTGTCCT  2886

Query    1  ---------------------------------------------------------------------ATGGA  5
                                                                                 |..|.
Sbjct 2887  GGGGCAATTAGCTTGTCATCTGGGCCCTTGCAGGGTTCTTTTTTTTTTTTTTTTTTTTTTTTTCCTGAGACAGG  2960

Query    6  GTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGA--TCTCGGCTCACTGCAACCTCTGCCTCTCGAGGT  77
            ||||..||||||.||||||.||||||||.||||||||||  ||||||||||||||||||||.|||||.||.|.|
Sbjct 2961  GTCTTGTTCTGTTGCCCAGGCTGGAGTGCAGTGGCATGATCTCTCGGCTCACTGCAACCTCCGCCTCCCGGGTT  3034

Query   78  CAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACG----CAACCATGCCCGGCTAAT  147
            ||||||||||.||||||||.||||||..||||||||||||||||||    ||    |.||||.|||.|||||| 
Sbjct 3035  CAAGCGATTCACCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGG----CGTGTACCACCACGCCTGGCTAA-  3103

Query  148  TTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG--  219
              ||||.||.|||||||||||||||||.||||||||..||||||||||||||||||||||||||||||||||  
Sbjct 3104  --TTTTCGTGTTTTTAGTAGAGATGGGTTTTCACCACATTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGTG  3175

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3176  ATTTGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCTACCATGCCAGGCCTCCTTGCAGGGTT  3249

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3250  TTCTATGCCCTTGATATCTGTCTCCCTGTCAACCTGGGACCTTGCTGTAAGTCTTGATAGGACAGGGAGAAGAG  3323

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3324  GGAGGCCCTACCGAGGCTCGAGGCTTCAGTGAAGGGTGACAGCAGTGGGAGTGTGGTACAGCCTCTGGAAGGAC  3397

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3398  ACAGTGTTCTCCCCGCCCCTTGTCTGGGAGCCAGGACTGTACCCTCCGAAGCCAGACATCACTGCCAACATATC  3471

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3472  CCCCTTGCTGGTGCCCTGGCATCTCAGCACATGACACACACCCACACCTGCAGGCTGTGGTTCCGGCTTGGCCT  3545

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3546  GCTCCCCGTCCGGCTGCTGCCGCTGCCTCTCTCCAGACCTCGCTTAAGGACAGTCCCAAACTCAGCTGGGGCAG  3619

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3620  GTGTTGGCCTGAAAGTCCTCCCCCAGCCTCTGCTGGCCAGCTTGGTGCTCACAGCTGCTGGGTAAGCTCTTGCC  3693

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3694  TAAGGAGCTGTGGGAAGCAGGGCTGATGCCCCAGCAACCTCTCCTCCCACTGTCTTTGAAGAAAGTAGCTTTAG  3767

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3768  ACCGGCTAAAAGCTTTAATCCAGAGCCTGCCCTACTCTGATAGTACCAGAGTGGAGGGCAGAATACCAAATGTC  3841

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3842  CAGGAACCAAAGGCAGGGCTGTGGGGACCTGAAGAGCAGCACAGTGGGGCCCGTGCTGCTGTGGGGGAAACTGA  3915

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3916  GGCTGGGAGCCTCAGCAGAGACCGGTGTCAAGAGTCTCTGGGAACTGCATAGGCCTGAGGAACATGCATTTTCA  3989

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3990  AGTTGTCCATTGATGGTTTCGTACCTGAATTTCTCACCTTTTGTGAACATCTTGGGAGGGTGGGGGTTTTGCAG  4063

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4064  GGGTGTTAAAAGCAAGGCTTGGAGCCCCTTTCCTCCAGCTGGTGGCTCCTTCTCAGGGCCTGGCCTCATTCAGG  4137

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4138  CCACTTTGTAGAGAAATGCCCTGACCTCGCAGGAAGGATTTCCCCACCCCCAAGTGGAAGGAAGAGGACAGTGT  4211

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4212  GGGCACCAGAGGGCCCTGGAAACATCTTAGGGGAAGGAAAGGAAAAGGATAAATTTGGAGTGGGGGGTCTCTAA  4285

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4286  ACAGATTGCCTGGATTCCGTTCTTTCCTGGGGTTCTACAGCTGCCTAAGCCCTCACCTTGGGGGAGGATCAAAG  4359

Query  220  ------------------------  219
                                    
Sbjct 4360  GGAATAAAGAGAACTCTTGGCTGA  4383

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