Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12783
- Subject:
- NR_126390.1
- Aligned Length:
- 3943
- Identities:
- 191
- Gaps:
- 3728
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGCGGTTTGAGACCAGCCTGGGCAATATAGCAACCGTCCTGCTGGCACACAAACCCTCCTGCCTCTAAACAGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATTTGATGGGCCCCTTGGCAAAGGCAGGTTTTAGAAACTCCTCGGGGGCTGGAGCGCAAGGAGAGTCTGAGCCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGCCAAGCCTCCCTGGGGGAACATGGCTGAAGGAAGACCTACAGACATCTCCCCTGGGTGGGAGCCTGTGTTCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAAGCAGCAGATCCAAGTCTCTGTGTGGCTGAGGAGAGGACATCCTGCTGGCAACACGGAGAATGCCATATAAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGCTAAGACAGAGATCAGAGCCATGCAGCTGCAAGCCGAAGCAGGCCAAGGATTGCCAGCAAACCAAGAGAGGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGGAAGAAGAGAGAAGGATCTTTCCCTGCTGATTTCACAGGGAGCATGGCCCTTGATCTCAGGACCTTGACCCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGAACTTTCTGGCTGCCAATACCAAGTTCCTCCTCTCCATCTCACATTCAAAGAGCACACAGAGAGGCTCTAAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGGGTCTTTCTACATCCTGTGTCCGTACAGAGCTCTCGCGTTTGGGTGGGGACTTTGCACCGTGACCAGTCTAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GATCAGCACCAGCCCCTGGTCCAATCAGCTGTGGCCAAGACCCTTGAAGACACAGAAACATGGCCAGTGTGGCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ATCTCTGATGGCAACATCAAGATGTCTAATGACATGAAGGCACACGAGTTGGTGACATCAGAGGAGGTGAAACA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GTGCAAGAAGGTAGTGCTCTTCTGACATAATGAGGCCAAGAAGAATGTCACCCTGGAAGGGGCAAGGAGATCCT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CGTAGGTGGTGCAGGCCAGACTGTTGATGGCCCTATGCCACCTTAGTCAAGATGCTGCCAGACAAGGACTGCTC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTCCACCCTCTATGACACAGCCTGAGACCAAGAACAGCAAGAAGGAAGATCTGGAGTTTATCTTCTGGGACCCT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GAGTCTGTACCCTCTAAGAGCTAAGTGACCTATGCCAGCTCCAAGGATGTCATCAAGGGGAAGCTGATGGAGAT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CAAGCATGAATCACAAGGAGGTCAAGGGCCATAGCATCCTGGCAGAGAAGCTTGGAGGCAGCGCCATCATCTCC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TGGAGGGCATGCCTTTGTGAACCCCCTCCAGCCCCCTGCCTGGAACATCTGGCAGCTCCTGACCTATCTGCAGA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GAGTTGTCTGTCCCCTTCCTCCAAGACCAGAGGGGTTTGGGGGATCCCAGCAAGGGGAAGATAATCCCCTCACC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCAGTTACCAAGCAGCCCTCACCCCCAGGCCTTCCTCCTCCCTCCATCCCTGATGGTTCTGGCTTTCCCAGGCC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ACTTTTGACCTTCTAATTCCTCTTGGATTGAAACAGACAAAGTTCCCCTCACGCACCCTAGTTTGGGAGGAGCC 1406
Query 1 -----------------------------------------ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTG 33
|..|.||||||.|||||||||||||||||||||
Sbjct 1407 TGTATTTTGTTTTTTGTTTGTTTGTTTGTTTGTTTTTTGAGACAGGGTCTCACTCTGTCGCCCAGACTGGAGTG 1480
Query 34 AAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGG-TCAAGCGATTCTCCTGCCTCGGCCTCCGGA 106
.||.||||||||||||||||||..|||||||.||||| |.||| |||||.||||.|||||||||.||||||..|
Sbjct 1481 CAGCGGCATGATCTCGGCTCACCACAACCTCCGCCTC-CCAGGCTCAAGTGATTGTCCTGCCTCAGCCTCCCTA 1553
Query 107 GTAGCTGGGATTACAGGCA--CA-CGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTT 177
||||||||||||||||||| || |.|||| ||||||.|||| |||||||||||||||.||||||||||||||
Sbjct 1554 GTAGCTGGGATTACAGGCATCCACCACAAC--TGCCCGACTAA-TTTTTTTGTATTTTTGGTAGAGATGGGGTT 1624
Query 178 TCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG-------------------------------- 219
.||||||||||.|||||||||.||.||.|||||||||||||.
Sbjct 1625 CCACCATGTTGACCAGGCTGGCCTTGAGCTCCTGACCTCAAATGATCCACTCGCCTCAGCCTCCCAAAGTTCTG 1698
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1699 GGATTACAAGCATGAGTCACTGCACCCAGCCTAGCCTACATTTTTTTTTAACAACACCCATTTTTTTTTTTTTT 1772
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1773 TTTTGAGACAAAGTTTTGCTCTTGTTGCCCGGGCTGGAGTGCAATGGCGTGATCTTGGCTCACTGCAACCTCTG 1846
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1847 CCTCCCGGTTCAAGTGATTCTCCCGCCTCAGCCTCCCGAGTAGCTGAGATTACAGGCATTCGCCACCATGCCCC 1920
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1921 ACTAATTTCGTATTTTTAGTAGAGACGGGGTTTCTCCATGTTGGTCAGGCTTATCTCGGCCTCAGGTGATCCAC 1994
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1995 CCACCTCAGCCTCCTAAAGTACTGGGATTACAGGCATGAGCCACTGCACCTGGCCACCCCATGCTACCAACTTC 2068
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2069 TAATCACAATAACTGTTGACTCTGTGCTTGTGTGTTCCATTCTGTGTGTGAGTGGAATGTGGTAGAGGTGACCC 2142
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2143 TCCCTGGGCCGGCTGATTCCTCTCCCTTTTCACCTGGTCACCGCCACTCGTAGAAGCAGGACCAGTAAGGGACT 2216
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2217 TCAATTAGAAAACAAAACAAGACAGATTATAGGAATAGCAGATGTAGAGAAAAAACACTACCTCTAGGGCCGAG 2290
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2291 GCAAAATATTCAAGGAAGACAAGCTTGGACGAAGCCTCCCCTCCAAGGCTGAGATGCACATCGTTGATGAAAGA 2364
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2365 TGTGGCCACTGGATGGGATAAGAGTTTGCTGAGGTGCTGCAGACCATGGCTGGCAAGCAGAAAACCACCTGCTG 2438
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2439 GGTGCTGGGGAAACTTTCCAGGAAGCCTCCTGTTGGGGTGACAGTGAACCTTCCAGGAGGGTTCACATCTCTGG 2512
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2513 GTCTCCCACTGGCCCCACCAGCTGCAGTATTGCAGGAGCAAGAGGAAAAACACTGGGACCAGGAAGAAAGCCTC 2586
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2587 TGCCACTTGCAATGTCCCTCAGTGGCTGGCTACTGACAAAACGTAACATCGTGGCAGGTGGCAAGGGAGGAACA 2660
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2661 TTTACAGAGTCCATCTCTGATGTCACCAGCAGGGCCAGGAAGGGTTGATCTGGAGCTTGGAGGCCATACATCAG 2734
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2735 TAACTGGTTCAAATGGGACACTCCACAGTGGAAGAGCCAGTCCAACTAGATACATGACCTGTGAAAGTGCATGC 2808
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2809 ATGGAGGCCATTATCTTAAGCCAATTAATGCAGGAACAGAAAACCAAACACCACATGCTCTCACCCATAAGTGG 2882
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2883 GAGCTAAACATTGGATACACATGGACACAAAGATAGAAACAACAGACCCCGGGAACTACTAGAGTGGGGAGAGA 2956
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2957 GGGAGGAGACCAAGGGCTGAAAAACTACCTGTTTGTTACTATGCTCTTTACCTGGGTAATGGGATCATTTGTAG 3030
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3031 CCCAAAGCCTCCATGTTGCTGGAAAGGACATGATTTCATATATATATATGTATGTGTGTATATATACATACATA 3104
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3105 TATATATATACACATATATATATATATTTTTTTTTTGAGACGGAGTCTTGCTCTGTCACCCAGGCTCGAGTGCA 3178
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3179 GTGATGCTATCTCGGCGCACTGCAACCTCTGCCTCCCGGGTTCAAGCAATTCTCCTGCCTCATCCTCCCAAGTA 3252
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3253 GCTGGCATTACAGGCACATGTCACCACACCCAGCTAATTTCTTTTGTATTTTAATATAGACGGGGTTTCACCGT 3326
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3327 GTTGCCCAGGTTGGTCTCCCGAGCTCAGGCAATCCACCTGCCTTGATGGGCACCTAGGTTGGTTTCACGTCCTT 3400
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3401 GCTGTTGTGACTGGTGCTGCGATGTACATATGAGTGCATGTTTTTTTGGTAGAATGATTTGTTTTCCTTTGGGT 3474
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3475 ACATACCCAGTAACGGGATTGCTGCATCGAATGGTAGTTGTGTTTTCAGTTCTTTGAGAAATCTCCCACATTTT 3548
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3549 GAATCACATGTTTTAATTTTCAGATATATGACAACCTCCCCACACAGCCTATATTTTTGCTTCATTATTCCTAT 3622
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3623 TTTTATTTGTACATAAATTAGGTCACTTTCCTGCCCTGATCTACTGAAACTTCTAAATTTGCTACTTCCAAAGT 3696
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3697 CAATGCCAAATTCAGACTGGCTTTGGTCAGGGGAGGAAGTTAGGCAAGCCAGGATAAAAATTTAGTCTGGCCCA 3770
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3771 ACAACCTCCTCAGGAATGCGGGTTTAGTCTTAGCTCCTCCATTCCCTGGGACAATTATACTTGATTTCAAGTCA 3844
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3845 GGTTTTCTTAATTCCCAGTCAGCTGCTGTCACACTAACTGTCATTTGTTCTTTTATAAACTAGAAGATTTGCAG 3918
Query 220 --------------------- 219
Sbjct 3919 ATTAAAAAAAAAAAAGAAAAA 3939
