Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12783
Subject:
NR_133668.1
Aligned Length:
2610
Identities:
193
Gaps:
2396

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CAGCCGTTGACGGCAGCGGCACGTGAAAGTACCGACCTTTCTGGCCTTTGTGACGGACCTTTGGAGGCGGGTGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TTTCAGATTCGTGCGCTCCGGCCTTTCAGTGTCTCTGGAAGAAGACCAGCTACAAGGAAATACTTCTGAAAAAT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CACTCTGAACCCCAAGCTGGAGTGAATCTTCTCCTGAGCTCTCTCATTCCAGAATGGCAATCTTGTTTCAGGAG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AGATCTCTAATAGTGACTGATGGTAAAGGAAGAAGGCTGTGCCTAGAACAAAGAATCAGGCTGGCAAAGAAATC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  ACAGGTCTTTCCTCAAACTTTAAATTGCTACTCTCTGGAGATAGCTACCTGGACTTTACAGAGCTGTCAGAAGA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CTTGGGAAGGTTTGCCAGCATTGGAAAAAGCCACTTGGACTTCACAGAGCTGTCAGAAGACTTAGGAAGCTTTG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CCAGTAGTTCCTGAGACCAGAAATACATATTATGAAGCAGGTGCTGGAACAGGCCCTGGCCCCTACTTGTGAAG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CTGCAGATATAGATGGTGTTACTGAGAAGGAAACTAAGGACTTGGCTCCAAAACAAAACAAAACAAAATCTGGA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GATGCTGAATTTTGTTGGGGGGAATGTCTGTAGAACTGCAACATCAATGCAGTAAGTGTAGTAAAAGCTTTAGT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TTATGGTGAGTCATTACTCAGCATCATGGAGTCCACGATGAAGAGAATCTCTTTTCAATCTGTGCAATCAACAA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GTTTTTGAAAGGCTTTTGTTTATAGTGGAACCCTCTTTTCCCCCTAGAAGAACCACCACAAGGAAAAATGCTGT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CACCATAAGGAATGTGGGAAAGTTTTCAGCCACATGGCCTTATTTGACTTCAAAGAATCCACATGAGAGAGAGA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CTGCATAAATGTAATAACTGAGGAGGCCTTTGTTCAGCAAAGAAACCTTATACAAACTCGTATAAAGAATGTAG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GAAGACCTTCACCCAGAAGCCAGGACTGACTGTGCACCAGAGAATCTGCACAATAAACATGATGAATGTGGAGA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TGCTTGCTTCAGCATTGGAGAATTCACAGTAAAGGGAAACCCTGCCAGTGTGATGAGTACGGAAAAGTCTTCAG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  AGGTTGGAACTTGGGAAAAATCAGTGAGTGAATTCATATTAGAGAGGCTCTTATAAATGAGAGGATTGTGGAAA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CTTGTATAGACAGAGATCAGACCTCAACAAGGGAGCCTCCACAGTATTGAAAAGTTAATATAATTAATGTAAGT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GGGCAAGTTGTATGGGGAATGGGTAGTCTAAATTGCTCATTTTAGCCAGTAAAAACATTAAATTAGTTTCTTAG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  ATCAAGAAAAGGAAATGTTAGAAGTTATTTTTCCCTTCCAGAGGGGTCTATATGTGTAAGCAACCAGGACTTTT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GAAATAAGTTGCATCTCTGGATTTGTGATCTGTCTCCTGGATGATTATCTCTGTTTTGGGAGACAGGTATTTTT  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TCTTCATGCCTGCTCTAGTCTCATCTCATATCTTTAATTCATTCAGCAAGTATACACAATAGTATTATCGTCTA  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  CTGTTTGTTGTAAATATATATATATTATTTTCTTTTTGGTCTGAGTAGGCTTGTATTGGTACCCTAGGACATAA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  AAATCACATATATCATGTTTCAGTAAATGCAGTGAAAGGAACTATATTATTAAATTGCTGGGAATTTCTGTAAA  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  TTTGAGACTACCTTTATATTCTCCAACACAAGACCGTGTAGGTGTCCCTTCAGAGAGTATATTTTTCTAGCTTG  1776

Query    1  ----------------------------ATGGAGTCT--CATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGA  44
                                        |||||||||  | |.|||||||||||.||||||||.|.|||||.||
Sbjct 1777  GCTTCTTTATTTTCTTTATTTTTTTGAGATGGAGTCTTGC-TCCTGTCGCCCAGGCTGGAGTGCAATGGCACGA  1849

Query   45  TCTCGGCTCACTGCAACCTCTGCCTCTCGAGG-TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGAT  117
            ||||||||||||||||||||.||||| |.||| |||||.||||||||||.|||.|.||||.|||||||||||||
Sbjct 1850  TCTCGGCTCACTGCAACCTCCGCCTC-CCAGGTTCAAGTGATTCTCCTGTCTCAGTCTCCCGAGTAGCTGGGAT  1922

Query  118  TACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCC  191
            |||||||||..||.|||||.|||.|||||   |||||||||||||||||||||.||||||||||||||||||||
Sbjct 1923  TACAGGCACTTGCCACCATTCCCAGCTAA---TTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCC  1993

Query  192  AGGCTGGTCTCGAACTCCTGACCTCAAG----------------------------------------------  219
            ||||||||||||||||||||||||...|                                              
Sbjct 1994  AGGCTGGTCTCGAACTCCTGACCTTGTGATCTGCCCACCTTGGCCTCCCAAAGTTCAGGGATTACAGGCATGAG  2067

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2068  CCACCATGCCCGGCTGTTTTTTTAAGATAGAAAAATATACTTCATGTATAGCCTATTGACAGATAATGACTGAT  2141

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2142  ATTTTTTCTTATAGATAACACATAATAAACATTGTGAAGACTAATAAGTAACTTGCTTATTCTTTTCAGTTCTA  2215

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2216  AAACCTGTAGGAAAGAATCTTTAGAAGCTGTCAACAAGTTGATAATGTAGCCCAATCTCTACCCATGATAGGAG  2289

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2290  AGTAAGGCTTATATATTTTATAGTAGGGCACTAAATACAGGAACCATGTATTTAAAAACTTTTTAGTGATTATC  2363

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2364  TCAGAATTCTAGGTGTCCCTCTGCTGTACATCCCTAAATTTTTTGCATAGGTATTATTAATAAATTCATTATTT  2437

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2438  TCAAAGATGGACTGTGTTCTGTAAAAAGCTTTTCCAGTATCTGCAAATCACACAGTTTTTTTTAACTCTATTAC  2511

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2512  TATTATATAAAATGATTTCTTAATATTGAACCAACCTTGCATTCCTAGAATAAACCTCACTTAGCCATGAAAAA  2585

Query  220  --------------------  219
                                
Sbjct 2586  AAAAAAAAAAAAAAAAAAAA  2605

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