Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12783
Subject:
NR_134867.2
Aligned Length:
4397
Identities:
190
Gaps:
4181

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCAGACCCAGCGCCGAGCCCGAGCCATGGCGTCCGAGCGGCTCCCTAACAGGCCCGCCTGTCTGCTCGTGGCCA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GCGGCGCCGCCGAAGGGGAAAGCCATGGAATTTGTGGATGTGACTGAGAGCAATGCACGCTGGGTGCAAGACTT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCGCCTCAAGGCTTACGCCAGCCCCGCCAAGCTCGAGTCCATCGATGGTGCCCGGTACCATGCCCTCCTGATCC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CCAGCTGTCCTGGGGCCCTGACCGACCTGGCCAGCAGTGGCTCCCTGGCCCGTATCCTGCAGCACTTCCACTCT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GAGAGCAAACCCATCTGCGCCGTCGGCCACGGTGTCGCCGCCCTGTGCTGTGCCACCAACGAGGACAGATCCTG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GGTGTTCGACAGCTACAGCCTGACAGGGCCCTCTGTGTGTGAGCTCGTCAGGGCCCCCGGCTTCGCCCGCCTGC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CGCTCGTGGTGGAGGACTTCGTGAAGGATTCGGGCGCCTGCTTCAGTGACCCAGACAGGCTGACCTACTGCTGA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CCCTGGGAGCCCGCCTGGAGTTCGAGGCTCTCAGTGGGTGAGGTGGACATTGCCTGAGGTTGGTGCCCTCGGTC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CTCCCCAGCAAGCGAGCCTGACGCTGTCCACGTCGTGCTGGACCGCCACCTGGTCACAGGCCAGAATGCCAGCT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CCACTGTCCCGGCCGTGCAGAACCTGCTCTTCCTCTGTGGCAGCCGGAAATGAACCTGCTGGGTAGATGCACCC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CCTGAGACAGCCCAGGTGTCTCCAGAGGCAGCCCCGTCTCAGGCTTCAGGGACCCCGCCTCTTCCCTCCTGACA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  AGGGCCCTGGATGGCAGCCTGGTCTGGCCCTGATGGGATTGTTGGAGGCCTCCTGGAATCAGCTCTGAGGGGGT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GTCGGCTCTCCTGGAGGGTCCAAACCCCCATCCTCCTGCATGTTCTCTGGTAGGAGGCAGAGAAAAGACCCCAC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GTGCCTGGAGAGCTGTGCTAGCTGCTAGGTGGTCCTCGGGAATTCCAGGCTGGGTTTTCTAGGGAGGACTGGTT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GTCACGTGTGGTCACTGTTGACTAGACAGAGTCGGCTCGGGGGTCCTCTGTGTGGGTTTGCCCTGCTGTGGCCT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GTCTGCCACCCACCACCTCTTTCACTGTTGGTGGGGGCCTTGAGGGGAGGGCCCAGCCGGCGGGAGCTGGCTCA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GAACTTTGGCCAAAGGTGAACGGAATTTTTTAGGAGCAGCAGCCTCCTGCCCCAAGGCCGACCGGCACTGGCAG  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  CACTTTCCTGTTGAAGAAATCTTCCTGGCGTGTGGTTTCAAAGTGTAAGCACCTCAGTGATGCACCCTGTCCTA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  AGCATTGAGAGGCACGTTTACTTGTGAATATGAGACCATGAGATTCTCAATGATAGGAAAGTGCTGTCCCCCAC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GGCCTTGCACAGTGGCCTCGGGTAGAGCGGCTATCAAGAGCAGACAGTGGTCCAGCCTGCTGGGCACCTGGCCT  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GGGCTGTGGCCCTCCAGCGGGCTGCCCCCTGGCCCCAGGTTAGGGCGTCCAGGAGAGGCTTAGGCCCTCTACTT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  CCTCACAGTTCCCCAGTTTGAGCCATCGAAGGCCTTCTTCCTGCCCACCTCCCCGTCTCAGCCACAGCCGTTCC  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  CAAGCACCAGCGTGGCTCCTGGTGCCAGTGACCTGCCAGGAGGCCCCTTGTGATTATAAAACCGTTCAGTTGGG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  CCGGGCGCAGTGGCTCACACCTGTAACCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  TCGAGACCATCCTGGCTAACATGGTGAAACCCCATCTCTACTAAAAAACAAAAATACAAAAAGTTAGCCTGGCA  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  TGGTGGTGGGTGTGTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAGGCAGAG  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  CTTGCAGTGAGCTGAGATCGTGCCACTGCACTCCAGCCTGGGCAATAGAGTGAGACTCCATCTCAAAAAAAAAA  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  CGTTCAGTTGGCTGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGTGGGTGGATCATC  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  TGAAGTCAGGAGTTTGGGAAAAGCCTGGCCAACATGGTGAAACTAAAATACAAAAATGAGCCGGGTGTGGTGTC  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  AGGCGCCTGTATTCCCAGCTACTTGGGAGGCTGAGACGTGAGAATTGCTTGAACCTGGGAGGCGGAAGTTGCAG  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  TGAGCCAAGATTGCGCCATTGCACTCCAACCTGGGCAATGAGTGAAACTCCGTCTCAAAAATAAAAAATAATAA  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  AATAAAGCCGTTCAATAAGGAGAATTTGGAAAAAAGTGGAAGAAGGAAGCGCTGCAGCCACATCCCCGCCCTGA  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  AGGCTGCGTCCCTCCAGTGCCTCGCAGATTAGTCAGGATGCCCACTTAGCACTGGCCACGGGGCCTTGCTCTGT  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  CCCGGGTCCACTCTCATCCCCGTGTGGTGATGGACCTCTGTGGACAAATGCTTTTTATTTTATTTATTTTTTGA  2516

Query    1  -ATGGAGTCTCATTCT-GTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTC  72
             |||||||.|...||| |||.|||||.||||||||.|||||||..||||.||||||||||||||||||.|||.|
Sbjct 2517  GATGGAGTTTGTCTCTCGTCACCCAGGCTGGAGTGCAGTGGCACAATCTTGGCTCACTGCAACCTCTGTCTCCC  2590

Query   73  GAGGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAA  146
            |.|.||||||||||||||||||||.||||||||||||||||||||||||||....|||.||||.|||.||||||
Sbjct 2591  GGGTTCAAGCGATTCTCCTGCCTCAGCCTCCGGAGTAGCTGGGATTACAGGTGTGCGCCACCACGCCTGGCTAA  2664

Query  147  TTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG-  219
               |||||||||||||.|||||||..|.||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct 2665  ---TTTTTGTATTTTTCGTAGAGACCGAGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGT  2735

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2736  GATCCTCCCGCCTCGGCCTCCCAAAGTGTTAGGATTACAGGCGTGAGCCACTGCGCCCGGCGTAATTTTTGTTT  2809

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2810  TTAGTAGAGATGGGGTTTCATCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCCATCTTCCTC  2883

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2884  AGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCGCCACGTCCGGCTAACAAGTACTTTTTTATTTTTATTTT  2957

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2958  ATTTTTTGGATGGAGTCTCACTCTGTCGCCCAGGCTGGAACACAGTGGCACGATCTCGGCTCACTGCAGCCTCC  3031

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3032  GCCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTAGGACTACAGGTGCACACCACCACACC  3105

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3106  CAGCTAATTTTTGTATTTTTCCTTTTTTTTTTTTTTTGAGATGGAGTCTTGCTCTGTTGGCAGGCTGGAGTGCA  3179

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3180  GTGGCGCGATCTCAGCTCACTGCAACCTCTGCCTCTGCCTCCCAGATTCAAGCAGTTCTCCTGCCTCAGCCTCC  3253

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3254  CGAGTAACTGGGACTACAGGTGCATGCCACTACGCCCAGCTAGTTTTTGTATTTTCAGTAGAGACGGGGTTTCA  3327

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3328  CCATGTTGGCCAGGATGGTCTCGATCTCTTGACCTCATGATCTGCCCGCCTCGGCTTCCCAAAGTGCTGGGACT  3401

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3402  ACAGGCAAGCTCATGTCTTAATGTCCTAGTCCATTTGGGCTCCTATAAGAAAATACTGTAAACTGGCCGGGCAC  3475

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3476  GGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGGTGGATCACCTGAGGTCAGGAGTTCGAGA  3549

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3550  CCAGCCTGGCCAAGATGGTGAAACCCCGTCTCTACTAAAAATACAGAAATTAGCCGGGCGCGGTGGTGGGCGCC  3623

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3624  TGTAATCCCATTTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCGGAGGTTGCAGTGAGCTG  3697

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3698  ACATCGTGCCACTGCACTCTAGTCTGGGTGACAGAGCAAGACTCCATCTCAAAAAAAAAAAAAAAGAAAATATT  3771

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3772  GTAAACCTAGTGGCTTATAAACAACAGAAATCAGTTTCAGTTTTGGAGGCTGGAAGCCCAAGATGAAAGCACCA  3845

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3846  GTAGATGCAACCTCTTTTGTGAGGGTGATGGTCCCATGATGAGGCTGTGCCCCTGCCCTGTGACCGGATGACCT  3919

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3920  CCCAAATGCCCCACCTAATACCATCCCCTTGCAGGTGAGGACTTAAGCAGGTGGGTTTTGGGGGGACGTGCTCA  3993

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3994  GGCCACAGCAGGGTGCATGAAGAGCCAGTGAGCCTCATTGAGCCCCTCTGGTCAGCCAGATCTGACATTGAGCC  4067

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4068  CAGCATTGAAGATCAAAGCAGGTGGGGCTTTGGGATGTGAAGTGGGTTCTGACGCGGGGCCCCACAGACCTGTC  4141

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4142  TCCGCGTGAGCTGCCTGCAGGCCCCTGCGTCATTCCTCAGCTGCGTGCGAGGCCTCTGGCTTGGAGAGCCTCCC  4215

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4216  CGCTGTGCACAGTTCTCTCTTTGCCAGGGCAGGGCTTGGGGCAGCACCAGGCTGGGGCAGAGGAGGAAAGCAAG  4289

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4290  AGGACAGACCTCCAGAAGAGCAGCGGAGGGCGGGTGAGGATTTCCCCATATACCAGTGTGTGTTCATCTACCCA  4363

Query  220  -------------------------------  219
                                           
Sbjct 4364  TGAGGAATAAAACCATGCAGCAGCATGCAAA  4394

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.