Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12783
Subject:
NR_134868.2
Aligned Length:
4460
Identities:
190
Gaps:
4244

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCAGACCCAGCGCCGAGCCCGAGCCATGGCGTCCGAGCGGCTCCCTAACAGGCCCGCCTGTCTGCTCGTGGCCA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GCGGCGCCGCCGAAGGTGTGTCGGCCCAGTCCTTCCTCCACTGTTTCACGATGGCCAGCACCGCCTTCAACCTG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CAGGTGGCCACCCCTGGGGGGAAAGCCATGGAATTTGTGGATGTGACTGAGAGCAATGCACGCTGGGTGCAAGA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CTTCCGCCTCAAGGCTTACGCCAGCCCCGCCAAGCTCGAGTCCATCGATGGTGCCCGGTACCATGCCCTCCTGA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TCCCCAGCTGTCCTGGGGCCCTGACCGACCTGGCCAGCAGTGGCTCCCTGGCCCGTATCCTGCAGCACTTCCAC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TCTGAGAGCAGTAGGTGACCCCTGGGACCCAGGGGAGGGGTTGGATGTGCAGTGTCACAAGAAATGGGTCTCCC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  ACCAGCAGAAGAGAGGTGGGAAGACTCCAGAACCCATCTGCGCCGTCGGCCACGGTGTCGCCGCCCTGTGCTGT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GCCACCAACGAGGACAGATCCTGGGTGTTCGACAGCTACAGCCTGACAGGGCCCTCTGTGTGTGAGCTCGTCAG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GGCCCCCGGCTTCGCCCGCCTGCCGCTCGTGGTGGAGGACTTCGTGAAGGATTCGGGCGCCTGCTTCAGTGCAA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GCGAGCCTGACGCTGTCCACGTCGTGCTGGACCGCCACCTGGTCACAGGCCAGAATGCCAGCTCCACTGTCCCG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GCCGTGCAGAACCTGCTCTTCCTCTGTGGCAGCCGGAAATGAACCTGCTGGGTAGATGCACCCCCTGAGACAGC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CCAGGTGTCTCCAGAGGCAGCCCCGTCTCAGGCTTCAGGGACCCCGCCTCTTCCCTCCTGACAAGGGCCCTGGA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TGGCAGCCTGGTCTGGCCCTGATGGGATTGTTGGAGGCCTCCTGGAATCAGCTCTGAGGGGGTGTCGGCTCTCC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TGGAGGGTCCAAACCCCCATCCTCCTGCATGTTCTCTGGTAGGAGGCAGAGAAAAGACCCCACGTGCCTGGAGA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GCTGTGCTAGCTGCTAGGTGGTCCTCGGGAATTCCAGGCTGGGTTTTCTAGGGAGGACTGGTTGTCACGTGTGG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TCACTGTTGACTAGACAGAGTCGGCTCGGGGGTCCTCTGTGTGGGTTTGCCCTGCTGTGGCCTGTCTGCCACCC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  ACCACCTCTTTCACTGTTGGTGGGGGCCTTGAGGGGAGGGCCCAGCCGGCGGGAGCTGGCTCAGAACTTTGGCC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  AAAGGTGAACGGAATTTTTTAGGAGCAGCAGCCTCCTGCCCCAAGGCCGACCGGCACTGGCAGCACTTTCCTGT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TGAAGAAATCTTCCTGGCGTGTGGTTTCAAAGTGTAAGCACCTCAGTGATGCACCCTGTCCTAAGCATTGAGAG  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GCACGTTTACTTGTGAATATGAGACCATGAGATTCTCAATGATAGGAAAGTGCTGTCCCCCACGGCCTTGCACA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GTGGCCTCGGGTAGAGCGGCTATCAAGAGCAGACAGTGGTCCAGCCTGCTGGGCACCTGGCCTGGGCTGTGGCC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  CTCCAGCGGGCTGCCCCCTGGCCCCAGGTTAGGGCGTCCAGGAGAGGCTTAGGCCCTCTACTTCCTCACAGTTC  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  CCCAGTTTGAGCCATCGAAGGCCTTCTTCCTGCCCACCTCCCCGTCTCAGCCACAGCCGTTCCCAAGCACCAGC  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  GTGGCTCCTGGTGCCAGTGACCTGCCAGGAGGCCCCTTGTGATTATAAAACCGTTCAGTTGGGCCGGGCGCAGT  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  GGCTCACACCTGTAACCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATC  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CTGGCTAACATGGTGAAACCCCATCTCTACTAAAAAACAAAAATACAAAAAGTTAGCCTGGCATGGTGGTGGGT  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  GTGTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAGGCAGAGCTTGCAGTGAG  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  CTGAGATCGTGCCACTGCACTCCAGCCTGGGCAATAGAGTGAGACTCCATCTCAAAAAAAAAACGTTCAGTTGG  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  CTGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGTGGGTGGATCATCTGAAGTCAGGA  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  GTTTGGGAAAAGCCTGGCCAACATGGTGAAACTAAAATACAAAAATGAGCCGGGTGTGGTGTCAGGCGCCTGTA  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  TTCCCAGCTACTTGGGAGGCTGAGACGTGAGAATTGCTTGAACCTGGGAGGCGGAAGTTGCAGTGAGCCAAGAT  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  TGCGCCATTGCACTCCAACCTGGGCAATGAGTGAAACTCCGTCTCAAAAATAAAAAATAATAAAATAAAGCCGT  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  TCAATAAGGAGAATTTGGAAAAAAGTGGAAGAAGGAAGCGCTGCAGCCACATCCCCGCCCTGAAGGCTGCGTCC  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  CTCCAGTGCCTCGCAGATTAGTCAGGATGCCCACTTAGCACTGGCCACGGGGCCTTGCTCTGTCCCGGGTCCAC  2516

Query    1  ----------------------------------------------------------------ATGGAGTCTC  10
                                                                            |||||||.|.
Sbjct 2517  TCTCATCCCCGTGTGGTGATGGACCTCTGTGGACAAATGCTTTTTATTTTATTTATTTTTTGAGATGGAGTTTG  2590

Query   11  ATTCT-GTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCG  83
            ..||| |||.|||||.||||||||.|||||||..||||.||||||||||||||||||.|||.||.|.|||||||
Sbjct 2591  TCTCTCGTCACCCAGGCTGGAGTGCAGTGGCACAATCTTGGCTCACTGCAACCTCTGTCTCCCGGGTTCAAGCG  2664

Query   84  ATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTA  157
            |||||||||||||.||||||||||||||||||||||||||....|||.||||.|||.||||||   ||||||||
Sbjct 2665  ATTCTCCTGCCTCAGCCTCCGGAGTAGCTGGGATTACAGGTGTGCGCCACCACGCCTGGCTAA---TTTTTGTA  2735

Query  158  TTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG------------  219
            |||||.|||||||..|.|||||||||||||||||||||||||||||||||||||||||||||            
Sbjct 2736  TTTTTCGTAGAGACCGAGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGTGATCCTCCCGC  2809

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2810  CTCGGCCTCCCAAAGTGTTAGGATTACAGGCGTGAGCCACTGCGCCCGGCGTAATTTTTGTTTTTAGTAGAGAT  2883

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2884  GGGGTTTCATCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCCATCTTCCTCAGCCTCCCAAA  2957

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2958  GTGCTGGGATTACAGGCGTGAGCCGCCACGTCCGGCTAACAAGTACTTTTTTATTTTTATTTTATTTTTTGGAT  3031

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3032  GGAGTCTCACTCTGTCGCCCAGGCTGGAACACAGTGGCACGATCTCGGCTCACTGCAGCCTCCGCCTCCCGGGT  3105

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3106  TCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTAGGACTACAGGTGCACACCACCACACCCAGCTAATTTT  3179

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3180  TGTATTTTTCCTTTTTTTTTTTTTTTGAGATGGAGTCTTGCTCTGTTGGCAGGCTGGAGTGCAGTGGCGCGATC  3253

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3254  TCAGCTCACTGCAACCTCTGCCTCTGCCTCCCAGATTCAAGCAGTTCTCCTGCCTCAGCCTCCCGAGTAACTGG  3327

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3328  GACTACAGGTGCATGCCACTACGCCCAGCTAGTTTTTGTATTTTCAGTAGAGACGGGGTTTCACCATGTTGGCC  3401

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3402  AGGATGGTCTCGATCTCTTGACCTCATGATCTGCCCGCCTCGGCTTCCCAAAGTGCTGGGACTACAGGCAAGCT  3475

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3476  CATGTCTTAATGTCCTAGTCCATTTGGGCTCCTATAAGAAAATACTGTAAACTGGCCGGGCACGGTGGCTCACG  3549

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3550  CCTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGGTGGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGGCC  3623

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3624  AAGATGGTGAAACCCCGTCTCTACTAAAAATACAGAAATTAGCCGGGCGCGGTGGTGGGCGCCTGTAATCCCAT  3697

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3698  TTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCGGAGGTTGCAGTGAGCTGACATCGTGCCA  3771

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3772  CTGCACTCTAGTCTGGGTGACAGAGCAAGACTCCATCTCAAAAAAAAAAAAAAAGAAAATATTGTAAACCTAGT  3845

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3846  GGCTTATAAACAACAGAAATCAGTTTCAGTTTTGGAGGCTGGAAGCCCAAGATGAAAGCACCAGTAGATGCAAC  3919

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3920  CTCTTTTGTGAGGGTGATGGTCCCATGATGAGGCTGTGCCCCTGCCCTGTGACCGGATGACCTCCCAAATGCCC  3993

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3994  CACCTAATACCATCCCCTTGCAGGTGAGGACTTAAGCAGGTGGGTTTTGGGGGGACGTGCTCAGGCCACAGCAG  4067

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4068  GGTGCATGAAGAGCCAGTGAGCCTCATTGAGCCCCTCTGGTCAGCCAGATCTGACATTGAGCCCAGCATTGAAG  4141

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4142  ATCAAAGCAGGTGGGGCTTTGGGATGTGAAGTGGGTTCTGACGCGGGGCCCCACAGACCTGTCTCCGCGTGAGC  4215

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4216  TGCCTGCAGGCCCCTGCGTCATTCCTCAGCTGCGTGCGAGGCCTCTGGCTTGGAGAGCCTCCCCGCTGTGCACA  4289

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4290  GTTCTCTCTTTGCCAGGGCAGGGCTTGGGGCAGCACCAGGCTGGGGCAGAGGAGGAAAGCAAGAGGACAGACCT  4363

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4364  CCAGAAGAGCAGCGGAGGGCGGGTGAGGATTTCCCCATATACCAGTGTGTGTTCATCTACCCATGAGGAATAAA  4437

Query  220  --------------------  219
                                
Sbjct 4438  ACCATGCAGCAGCATGCAAA  4457

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