Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12783
- Subject:
- NR_134868.2
- Aligned Length:
- 4460
- Identities:
- 190
- Gaps:
- 4244
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCAGACCCAGCGCCGAGCCCGAGCCATGGCGTCCGAGCGGCTCCCTAACAGGCCCGCCTGTCTGCTCGTGGCCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCGGCGCCGCCGAAGGTGTGTCGGCCCAGTCCTTCCTCCACTGTTTCACGATGGCCAGCACCGCCTTCAACCTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAGGTGGCCACCCCTGGGGGGAAAGCCATGGAATTTGTGGATGTGACTGAGAGCAATGCACGCTGGGTGCAAGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTTCCGCCTCAAGGCTTACGCCAGCCCCGCCAAGCTCGAGTCCATCGATGGTGCCCGGTACCATGCCCTCCTGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCCCCAGCTGTCCTGGGGCCCTGACCGACCTGGCCAGCAGTGGCTCCCTGGCCCGTATCCTGCAGCACTTCCAC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCTGAGAGCAGTAGGTGACCCCTGGGACCCAGGGGAGGGGTTGGATGTGCAGTGTCACAAGAAATGGGTCTCCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACCAGCAGAAGAGAGGTGGGAAGACTCCAGAACCCATCTGCGCCGTCGGCCACGGTGTCGCCGCCCTGTGCTGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCCACCAACGAGGACAGATCCTGGGTGTTCGACAGCTACAGCCTGACAGGGCCCTCTGTGTGTGAGCTCGTCAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGCCCCCGGCTTCGCCCGCCTGCCGCTCGTGGTGGAGGACTTCGTGAAGGATTCGGGCGCCTGCTTCAGTGCAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GCGAGCCTGACGCTGTCCACGTCGTGCTGGACCGCCACCTGGTCACAGGCCAGAATGCCAGCTCCACTGTCCCG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCCGTGCAGAACCTGCTCTTCCTCTGTGGCAGCCGGAAATGAACCTGCTGGGTAGATGCACCCCCTGAGACAGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCAGGTGTCTCCAGAGGCAGCCCCGTCTCAGGCTTCAGGGACCCCGCCTCTTCCCTCCTGACAAGGGCCCTGGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TGGCAGCCTGGTCTGGCCCTGATGGGATTGTTGGAGGCCTCCTGGAATCAGCTCTGAGGGGGTGTCGGCTCTCC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGGAGGGTCCAAACCCCCATCCTCCTGCATGTTCTCTGGTAGGAGGCAGAGAAAAGACCCCACGTGCCTGGAGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GCTGTGCTAGCTGCTAGGTGGTCCTCGGGAATTCCAGGCTGGGTTTTCTAGGGAGGACTGGTTGTCACGTGTGG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TCACTGTTGACTAGACAGAGTCGGCTCGGGGGTCCTCTGTGTGGGTTTGCCCTGCTGTGGCCTGTCTGCCACCC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ACCACCTCTTTCACTGTTGGTGGGGGCCTTGAGGGGAGGGCCCAGCCGGCGGGAGCTGGCTCAGAACTTTGGCC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AAAGGTGAACGGAATTTTTTAGGAGCAGCAGCCTCCTGCCCCAAGGCCGACCGGCACTGGCAGCACTTTCCTGT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGAAGAAATCTTCCTGGCGTGTGGTTTCAAAGTGTAAGCACCTCAGTGATGCACCCTGTCCTAAGCATTGAGAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GCACGTTTACTTGTGAATATGAGACCATGAGATTCTCAATGATAGGAAAGTGCTGTCCCCCACGGCCTTGCACA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GTGGCCTCGGGTAGAGCGGCTATCAAGAGCAGACAGTGGTCCAGCCTGCTGGGCACCTGGCCTGGGCTGTGGCC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CTCCAGCGGGCTGCCCCCTGGCCCCAGGTTAGGGCGTCCAGGAGAGGCTTAGGCCCTCTACTTCCTCACAGTTC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CCCAGTTTGAGCCATCGAAGGCCTTCTTCCTGCCCACCTCCCCGTCTCAGCCACAGCCGTTCCCAAGCACCAGC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GTGGCTCCTGGTGCCAGTGACCTGCCAGGAGGCCCCTTGTGATTATAAAACCGTTCAGTTGGGCCGGGCGCAGT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GGCTCACACCTGTAACCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CTGGCTAACATGGTGAAACCCCATCTCTACTAAAAAACAAAAATACAAAAAGTTAGCCTGGCATGGTGGTGGGT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GTGTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAGGCAGAGCTTGCAGTGAG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CTGAGATCGTGCCACTGCACTCCAGCCTGGGCAATAGAGTGAGACTCCATCTCAAAAAAAAAACGTTCAGTTGG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CTGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGTGGGTGGATCATCTGAAGTCAGGA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GTTTGGGAAAAGCCTGGCCAACATGGTGAAACTAAAATACAAAAATGAGCCGGGTGTGGTGTCAGGCGCCTGTA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TTCCCAGCTACTTGGGAGGCTGAGACGTGAGAATTGCTTGAACCTGGGAGGCGGAAGTTGCAGTGAGCCAAGAT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TGCGCCATTGCACTCCAACCTGGGCAATGAGTGAAACTCCGTCTCAAAAATAAAAAATAATAAAATAAAGCCGT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TCAATAAGGAGAATTTGGAAAAAAGTGGAAGAAGGAAGCGCTGCAGCCACATCCCCGCCCTGAAGGCTGCGTCC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CTCCAGTGCCTCGCAGATTAGTCAGGATGCCCACTTAGCACTGGCCACGGGGCCTTGCTCTGTCCCGGGTCCAC 2516
Query 1 ----------------------------------------------------------------ATGGAGTCTC 10
|||||||.|.
Sbjct 2517 TCTCATCCCCGTGTGGTGATGGACCTCTGTGGACAAATGCTTTTTATTTTATTTATTTTTTGAGATGGAGTTTG 2590
Query 11 ATTCT-GTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCG 83
..||| |||.|||||.||||||||.|||||||..||||.||||||||||||||||||.|||.||.|.|||||||
Sbjct 2591 TCTCTCGTCACCCAGGCTGGAGTGCAGTGGCACAATCTTGGCTCACTGCAACCTCTGTCTCCCGGGTTCAAGCG 2664
Query 84 ATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTA 157
|||||||||||||.||||||||||||||||||||||||||....|||.||||.|||.|||||| ||||||||
Sbjct 2665 ATTCTCCTGCCTCAGCCTCCGGAGTAGCTGGGATTACAGGTGTGCGCCACCACGCCTGGCTAA---TTTTTGTA 2735
Query 158 TTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG------------ 219
|||||.|||||||..|.|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2736 TTTTTCGTAGAGACCGAGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGTGATCCTCCCGC 2809
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2810 CTCGGCCTCCCAAAGTGTTAGGATTACAGGCGTGAGCCACTGCGCCCGGCGTAATTTTTGTTTTTAGTAGAGAT 2883
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2884 GGGGTTTCATCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCCATCTTCCTCAGCCTCCCAAA 2957
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2958 GTGCTGGGATTACAGGCGTGAGCCGCCACGTCCGGCTAACAAGTACTTTTTTATTTTTATTTTATTTTTTGGAT 3031
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3032 GGAGTCTCACTCTGTCGCCCAGGCTGGAACACAGTGGCACGATCTCGGCTCACTGCAGCCTCCGCCTCCCGGGT 3105
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3106 TCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTAGGACTACAGGTGCACACCACCACACCCAGCTAATTTT 3179
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3180 TGTATTTTTCCTTTTTTTTTTTTTTTGAGATGGAGTCTTGCTCTGTTGGCAGGCTGGAGTGCAGTGGCGCGATC 3253
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3254 TCAGCTCACTGCAACCTCTGCCTCTGCCTCCCAGATTCAAGCAGTTCTCCTGCCTCAGCCTCCCGAGTAACTGG 3327
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3328 GACTACAGGTGCATGCCACTACGCCCAGCTAGTTTTTGTATTTTCAGTAGAGACGGGGTTTCACCATGTTGGCC 3401
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3402 AGGATGGTCTCGATCTCTTGACCTCATGATCTGCCCGCCTCGGCTTCCCAAAGTGCTGGGACTACAGGCAAGCT 3475
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3476 CATGTCTTAATGTCCTAGTCCATTTGGGCTCCTATAAGAAAATACTGTAAACTGGCCGGGCACGGTGGCTCACG 3549
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3550 CCTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGGTGGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGGCC 3623
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3624 AAGATGGTGAAACCCCGTCTCTACTAAAAATACAGAAATTAGCCGGGCGCGGTGGTGGGCGCCTGTAATCCCAT 3697
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3698 TTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCGGAGGTTGCAGTGAGCTGACATCGTGCCA 3771
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3772 CTGCACTCTAGTCTGGGTGACAGAGCAAGACTCCATCTCAAAAAAAAAAAAAAAGAAAATATTGTAAACCTAGT 3845
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3846 GGCTTATAAACAACAGAAATCAGTTTCAGTTTTGGAGGCTGGAAGCCCAAGATGAAAGCACCAGTAGATGCAAC 3919
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3920 CTCTTTTGTGAGGGTGATGGTCCCATGATGAGGCTGTGCCCCTGCCCTGTGACCGGATGACCTCCCAAATGCCC 3993
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3994 CACCTAATACCATCCCCTTGCAGGTGAGGACTTAAGCAGGTGGGTTTTGGGGGGACGTGCTCAGGCCACAGCAG 4067
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4068 GGTGCATGAAGAGCCAGTGAGCCTCATTGAGCCCCTCTGGTCAGCCAGATCTGACATTGAGCCCAGCATTGAAG 4141
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4142 ATCAAAGCAGGTGGGGCTTTGGGATGTGAAGTGGGTTCTGACGCGGGGCCCCACAGACCTGTCTCCGCGTGAGC 4215
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4216 TGCCTGCAGGCCCCTGCGTCATTCCTCAGCTGCGTGCGAGGCCTCTGGCTTGGAGAGCCTCCCCGCTGTGCACA 4289
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4290 GTTCTCTCTTTGCCAGGGCAGGGCTTGGGGCAGCACCAGGCTGGGGCAGAGGAGGAAAGCAAGAGGACAGACCT 4363
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4364 CCAGAAGAGCAGCGGAGGGCGGGTGAGGATTTCCCCATATACCAGTGTGTGTTCATCTACCCATGAGGAATAAA 4437
Query 220 -------------------- 219
Sbjct 4438 ACCATGCAGCAGCATGCAAA 4457
