Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12783
Subject:
NR_136510.2
Aligned Length:
4622
Identities:
193
Gaps:
4408

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ACTTTTGATGGGTTCCGGGTCCCAAAAGGGTTCGAGGCCTCTTGCCTTCGCTCCGTAGGAGGGAGTTCTCTTCT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGCCCTGGGGGCCGCAGGACTGTCCAGGAATACAGTTTCCAGGTGAGATCTTACTTGAAACACCGGTAGTTCTA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCACAGCTAAAATGGCATCTACTTGGGCTATCCAGGCCCACATGGACCAGGATGAACCTTTGGAAGTAAAGATA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GAGGAAGAGAAATATACCACCAGACAGGATTGGGACCTGCGTAAAAACAACACCCATAGCAGAGAGGTCTTCCG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TCAGTACTTCAGACAGTTCTGCTACCAGGAGACATCTGGTCCCCGTGAGGCTTTGAGCCGACTCCGAGAACTTT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GCCATCAGTGGCTGAGGCCAGAGACCCACACCAAAGAACAGATTCTGGAGCTGCTGGTGCTGGAGCAGTTCCTG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  ACCATCCTACCTGAGGAGCTCCAGGCCTGGGTGCAGGAGCAGCATCCAGAGAGTGGGGAGGAGGTGGTGACTGT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GCTGGAGGATTTAGAGAGAGAACTGGATGAACCAGGAGAGCAGAGTGAGTCTGTCAGCTACATCTCATTTTCCT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CAGGTCTCAGTCCACACTGGGGAACAGGAAATGTTCTTGCAGGAGACGGTACGTCTACGAAAAGAAGGAGAACC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CAGTATGTCCCTCCAGTCCATGAAAGCCCAGCCAAAGTATGAATCTCCAGAACTTGAATCCCAACAGGAGCAAG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TTTTAGATGTTGAGACTGGAAATGAGTATGGGAATTTAAAGCAAGAAGTTTCTGAAGAAATGGAACCACATGGG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  AAGACATCCAGTAAATTTGAAAATGATATGTCCAAGTCTGCTAGGTGTGGAGAAACTCGTGAACCTGAAGAAAT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  AACAGAAGAGCCCTCTGCTTGCTCCAGAGAAGATAAACAACCTACCTGTGATGAAAATGGAGTAAGCCTGACTG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AGAACTCTGACCATACTGAACATCAGAGAATCTGTCCAGGAGAAGAATCTTACGGATGTGATGACTGTGGAAAA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GCTTTTAGTCAGCACTCACACCTCATAGAACATCAGAGGATCCATACTGGAGATAGACCCTACAAATGCGAAGA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  ATGTGGAAAAGCTTTCCGTGGGAGAACTGTGCTTATTCGACACAAAATAATACACACTGGAGAGAAACCGTATA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  AGTGTAATGAATGTGGCAAAGCCTTTGGCCGGTGGTCAGCTCTTAACCAACATCAGAGACTTCACACAGGAGAA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  AAACACTATCACTGTAATGACTGTGGCAAAGCCTTTAGTCAGAAAGCAGGCCTCTTTCACCATATCAAGATCCA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CACAAGAGACAAACCTTATCAGTGCACTCAGTGTAATAAAAGTTTTAGTCGGCGTTCCATACTTACTCAGCATC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  AAGGAGTTCATACCGGCGCCAAGCCGTATGAGTGCAACGAGTGTGGAAAAGCCTTTGTTTATAACTCATCCCTT  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GTTTCCCATCAGGAAATCCACCACAAAGAAAAATGCTATCAGTGTAAGGAATGTGGGAAATCCTTCAGTCAGAG  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  TGGCCTTATTCAGCATCAGAGAATTCACACTGGGGAAAAACCCTACAAATGTGACGTATGTGAAAAAGCCTTTA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TTCAAAGGACAAGTCTTACAGAACATCAGCGAATTCACACTGGAGAAAGACCCTATAAATGTGATAAGTGTGGG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  AAGGCGTTTACTCAAAGATCAGTCCTCACGGAACATCAGAGAATCCACACTGGAGAGAGGCCCTACAAGTGTGA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  TGAGTGTGGGAATGCCTTCCGAGGAATCACCAGCCTCATTCAGCATCAGAGAATCCACACTGGGGAGAAGCCCT  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  ACCAATGTGATGAGTGTGGAAAAGCCTTCAGACAGAGGTCAGATCTTAGTAAACACCAGAGAATCCATAATAGA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  CGTGGTACCTATGTATGTAAAGAGTGTGGGAAATCATTCAGGCAGAACTCAGCTCTTACTCAACATCAGACTAT  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  CCACAAAGGAGAAAAATCTGTTTCTGTGTGATGACTACAGGGAAGTTATCTCACAGAGTTCAGGCCGGTAAACA  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  AGACATTAAGTGTTTAAGGCAAAAAGCATGGAGAGGTTGGGGAAGAGCCAAGTTTCTAAAGTAATGAAAAGTGA  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  GGAAGAAGACCAGCTACAAGGAAATACTTCTGAAAAATCACTCTGAACCCCAAGCTGGAGTGAATCTTCTCCTG  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  AGCTCTCTCATTCCAGAATGGCAATCTTGTTTCAGGAGAGATCTCTAATAGTGACTGATGGTAAAGGAAGAAGG  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  CTGTGCCTAGAACAAAGAATCAGGCTGGCAAAGAAATCACAGGTCTTTCCTCAAACTTTAAATTGCTACTCTCT  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  GGAGATAGCTACCTGGACTTTACAGAGCTGTCAGAAGACTTGGGAAGGTTTGCCAGCATTGGAAAAAGCCACTT  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  GGACTTCACAGAGCTGTCAGAAGACTTAGGAAGCTTTGCCAGTAGTTCCTGAGACCAGAAATACATATTATGAA  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  GCAGGTGCTGGAACAGGCCCTGGCCCCTACTTGTGAAGCTGCAGATATAGATGGTGTTACTGAGAAGGAAACTA  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  AGGACTTGGCTCCAAAACAAAACAAAACAAAATCTGGAGATGCTGAATTTTGTTGGGGGGAATGTCTGTAGAAC  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  TGCAACATCAATGCAGTAAGTGTAGTAAAAGCTTTAGTTTATGGTGAGTCATTACTCAGCATCATGGAGTCCAC  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  GATGAAGAGAATCTCTTTTCAATCTGTGCAATCAACAAGTTTTTGAAAGGCTTTTGTTTATAGTGGAACCCTCT  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  TTTCCCCCTAGAAGAACCACCACAAGGAAAAATGCTGTCACCATAAGGAATGTGGGAAAGTTTTCAGCCACATG  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  GCCTTATTTGACTTCAAAGAATCCACATGAGAGAGAGACTGCATAAATGTAATAACTGAGGAGGCCTTTGTTCA  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  GCAAAGAAACCTTATACAAACTCGTATAAAGAATGTAGGAAGACCTTCACCCAGAAGCCAGGACTGACTGTGCA  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  CCAGAGAATCTGCACAATAAACATGATGAATGTGGAGATGCTTGCTTCAGCATTGGAGAATTCACAGTAAAGGG  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  AAACCCTGCCAGTGTGATGAGTACGGAAAAGTCTTCAGAGGTTGGAACTTGGGAAAAATCAGTGAGTGAATTCA  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  TATTAGAGAGGCTCTTATAAATGAGAGGATTGTGGAAACTTGTATAGACAGAGATCAGACCTCAACAAGGGAGC  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  CTCCACAGTATTGAAAAGTTAATATAATTAATGTAAGTGGGCAAGTTGTATGGGGAATGGGTAGTCTAAATTGC  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  TCATTTTAGCCAGTAAAAACATTAAATTAGTTTCTTAGATCAAGAAAAGGAAATGTTAGAAGTTATTTTTCCCT  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  TCCAGAGGGGTCTATATGTGTAAGCAACCAGGACTTTTGAAATAAGTTGCATCTCTGGATTTGTGATCTGTCTC  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  CTGGATGATTATCTCTGTTTTGGGAGACAGGTATTTTTTCTTCATGCCTGCTCTAGTCTCATCTCATATCTTTA  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  ATTCATTCAGCAAGTATACACAATAGTATTATCGTCTACTGTTTGTTGTAAATATATATATATTATTTTCTTTT  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  TGGTCTGAGTAGGCTTGTATTGGTACCCTAGGACATAAAAATCACATATATCATGTTTCAGTAAATGCAGTGAA  3700

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3701  AGGAACTATATTATTAAATTGCTGGGAATTTCTGTAAATTTGAGACTACCTTTATATTCTCCAACACAAGACCG  3774

Query    1  ------------------------------------------------------------------ATGGAGTC  8
                                                                              ||||||||
Sbjct 3775  TGTAGGTGTCCCTTCAGAGAGTATATTTTTCTAGCTTGGCTTCTTTATTTTCTTTATTTTTTTGAGATGGAGTC  3848

Query    9  T--CATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGG-TCA  79
            |  | |.|||||||||||.||||||||.|.|||||.||||||||||||||||||||||.||||| |.||| |||
Sbjct 3849  TTGC-TCCTGTCGCCCAGGCTGGAGTGCAATGGCACGATCTCGGCTCACTGCAACCTCCGCCTC-CCAGGTTCA  3920

Query   80  AGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTT  153
            ||.||||||||||.|||.|.||||.||||||||||||||||||||||..||.|||||.|||.|||||   ||||
Sbjct 3921  AGTGATTCTCCTGTCTCAGTCTCCCGAGTAGCTGGGATTACAGGCACTTGCCACCATTCCCAGCTAA---TTTT  3991

Query  154  TGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG--------  219
            |||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||...|        
Sbjct 3992  TGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTTGTGATCTGCCC  4065

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4066  ACCTTGGCCTCCCAAAGTTCAGGGATTACAGGCATGAGCCACCATGCCCGGCTGTTTTTTTAAGATAGAAAAAT  4139

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4140  ATACTTCATGTATAGCCTATTGACAGATAATGACTGATATTTTTTCTTATAGATAACACATAATAAACATTGTG  4213

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4214  AAGACTAATAAGTAACTTGCTTATTCTTTTCAGTTCTAAAACCTGTAGGAAAGAATCTTTAGAAGCTGTCAACA  4287

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4288  AGTTGATAATGTAGCCCAATCTCTACCCATGATAGGAGAGTAAGGCTTATATATTTTATAGTAGGGCACTAAAT  4361

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4362  ACAGGAACCATGTATTTAAAAACTTTTTAGTGATTATCTCAGAATTCTAGGTGTCCCTCTGCTGTACATCCCTA  4435

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4436  AATTTTTTGCATAGGTATTATTAATAAATTCATTATTTTCAAAGATGGACTGTGTTCTGTAAAAAGCTTTTCCA  4509

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4510  GTATCTGCAAATCACACAGTTTTTTTTAACTCTATTACTATTATATAAAATGATTTCTTAATATTGAACCAACC  4583

Query  220  ----------------------------------  219
                                              
Sbjct 4584  TTGCATTCCTAGAATAAACCTCACTTAGCCATGA  4617

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