Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12783
Subject:
NR_136738.2
Aligned Length:
5264
Identities:
182
Gaps:
5055

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCCGTCCGCGGAAATTTGAAATGGCTGACGGGTCGCTGACGGGCGGCGGTCTGGAGGCAGCGGCCATGGCGCCG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GAGCGCATGGGCTGGGCGGTGGAGCAGGAGCTGGCGTCTCTGGAGAAAGGTTTGTTCCAAGATGAAGATTCATG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CAGTGATTGTAGCTACCGTGATAAACCAGGTTCTAGTTTACAAAGTTTTATGCCAGAAGGAAAAACCTTTTTCC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CAGAAATTTTCCAAACAAATCAACTTTTGTTCTATGAGCGATTCAGAGCCTATCAAGATTACATTTTAGCTGAC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TGCAAGGCCTCTGAGGTACAGGAATTCACAGCTGAGTTCTTGGAGAAGGTCCTTGAGCCATCTGGATGGCGGGC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AGTCTGGCACACTAATGTGTTCAAGGTGCTGGTTGAGATCACAGATGTGGACTTTGCAGCCTTGAAGGCAGTGG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TGAGGCTTGCTGAACCATACCTCTGTGACTCTCAAGTGAGCACTTTTACCATGGAGTGCATGAAGGAGCTCCTT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GATCTGAAGGAGCATCGGTTGCCCCTGCAGGAGCTGTGGGTGGTGTTTGATGATTCAGGAGTGTTTGACCAGAC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AGCCCTTGCAATTGAGCATGTCAGATTTTTCTACCAAAACATTTGGAGGAGTTGGGATGAAGAAGAGGAGGATG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  AATACGATTATTTTGTCAGATGTGTTGAACCTCGATTAAGATTGCATTATGACATTCTTGAAGACCGAGTTCCA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TCAGGACTTATTGTTGACTACCACAATCTGTTGTCTCAATGTGAGGAGAGTTACAGGAAATTTTTAAATCTGAG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  AAGCAGTTTGTCAAATTGTAACTCTGATTCCGAGCAGGAAAATATCTCCATGGTGGAAGGGTTAAAATTGTATT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CGGAGATGGAACAGTTGAAACAAAAGCTGAAACTCATTGAGAATCCTTTGTTGAGGTATGTGTTTGGTTATCAG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AAGAATTCTAACATCCAAGCAAAGGGTGTCCGTTCCAGCGGTCAGAAGATCACTCATGTGGTCTCCTCCACCAT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GATGGCTGGTCTCCTGCGGTCCCTGCTTACGGACAGGCTTTGCCAGGAGCCTGGTGAGGAAGAAAGAGAAATTC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  AGTTCCATAGTGATCCATTGTCTGCTATAAATGCCTGCTTCGAAGGTGACACTGTTATTGTTTGTCCTGGCCAT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TATGTGGTACATGGCACTTTCTCCATTGCTGACTCCATTGAGTTGGAAGGATATGGCCTACCAGATGACATTGT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GATAGAAAAGAGGGGCAAAGGCGACACTTTTGTGGACTGCACTGGTGCTGATATTAAAATCTCAGGCATAAAAT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TTGTTCAGCATGATGCTGTAGAGGGAATCTTAATTGTTCACCGTGGTAAGACTACGCTGGAAAACTGTGTGCTG  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  CAGTGTGAGACGACCGGAGTCACAGTGCGGACATCAGCAGAGTTTCTAATGAAGAACTCGGATTTATATGGCGC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CAAGCCCTTGAACAATACTGTGTGTCTTTCATCTGACGTCCATGGTTTCTGATGCTGTCAATCACATTTTCTCT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  CCTATAGGGTGCTGGTATAGAAATCTACCCTGGGAGTCAGTGCACCCTGAGTGACAATGGGATCCATCACTGCA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  AGGAAGGGATCCTCATTAAGGACTTCTTAGATGAACATTATGACATTCCCAAGATATCCATGGTGAATAATATA  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  ATACATAATAATGAAGGTTATGGTGTTGTCTTGGTGAAACCTACAATCTTCTCTGACCTGCAAGAAAATGCTGA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  AGATGGAACTGAAGAAAATAAAGCGCTTAAAATTCAGACAAGTGGAGAGCCAGATGTGGCTGAAAGAGTGGATC  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  TAGAAGAGCTGATTGAGTGTGCAACTGGTAAAATGGAGCTTTGTGCAAGAACTGACCCTTCTGAGCAAGTCGAG  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  GGAAATTGTGAAATTGTAAATGAACTAATTGCTGCCTCCACACAGAAAGGCCAGATAAAGAAGAAAAGGTTGAG  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  TGAACTGGGGATCACGCAAGCTGATGACAACTTAATGTCACAGGAGATGTTTGTTGGGATTGTGGGGAACCAGT  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  TCAAGTGGAATGGGAAAGGTAGTTTTGGCACATTTCTTTTCTGACTACAGTGATGTAAGTAGATAGCAAAATAC  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  TGGATTTTGCACATGCTGCCCTAAGAATCACTGCTGCCATTGTAGTTTGCTGTATTGTCTGTATTTTATATTTG  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  ATTATTTGGGCTTGAGTGAAAGGTAGATTTATTTCCATTTGCAGGTGTTGCACATAAAACACTCCCTCTTTATA  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  AGAAAAATCATAAATGCATATAAAATAGAAAATATTTGGAGATTGCTTATCTGAAAGTCTTGCTTTCTTATACA  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  CATGGTTCTCTCATATTAAGCCTGGTAGTAACTTTTTAGTGTAATTACCTTTAGCACTTCAAAGACGAGGAAGT  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  AAGGAAGGGAATGCAAGACTAGTGCATAAAAATGCAATAGGTGTCATATGTACAGCATTCTTCTTAGAGTTGCC  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  TTTTCATCCCAATTACAGTGAGTCTGATTTCCATCCTGTATTTGCATAATACTTGTCTTAAAATAAAAGCTTTT  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  ATGATTGGGAATTTATCTGCCTAATCAGACTTATTATTGAGACGTCAATGGGACGCATTTTTCTGTTGAGCTAT  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  GCAGTCGTCAAAACAGCGATAGACAGCATAGGAGGTTTGAAGCAGAAATGAAATGTGTTATTCAGAGCCAATGT  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  TGTACATAGAGCATTTTCACTATTGCTGAATGGGAATGATTAAAAACAAGGTATTTTTCGGGCCAGGCGGTGGC  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  TCACGCTTGTAATCGCAGCACTTTGGGAGGCTGAGGCAGGAGGATCACTTGAGCCCAGGAGTTCAAGACTAGCC  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  TAGGCAACATAGTGAGACCCTGTCTCTACTAAAAATAAATTTAAAAAAAATTAGCTGAGTGTGGTGGTGCATGC  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  ATGTAGTTCCAGCTACTCAGGAGGCTGAGGCTAGAGGATCCTTGAGCCCAGGAGGTTGAGGCTGCAGTGAGGTG  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  TGATTGCGCCACTGCATTCCAGCTTGGGCGACAGAGCGAGACCCAGTCTCAAAAAAAAAAAAAAGTATTTTTCT  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  CTTACCGTTACAGTATTCTGATTATATTACTGACACAGTCAAAATGATTAACTGTACAACCTGTATCTGCTGGG  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  TGTTCTTGTTATCATATTGTAAAACAGCTTTAAAAATATTTATATTTTAAAAACTGTATGTGACATTAATATGC  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  CTAATGATTAAAATTATAGTGATGAAATAACAAAATTGAATCTTGTTATATCTTTTCAAACTCACTGTGGGCCA  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  TAGTGTCAGTGTAGCATATGTGGTCATTTAAGAATACATGGTATTTTGGTATCTGTTTTCATGCTTTAGAAAGA  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  GTATTACATTTTTTCCCATTAAGTGTGGTTATGTTTGTTTTTTAAATTTGAGTAAAAAATAATTCTTATTTTTT  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  GGATGCTACTAAATGTAGGATTTATGTTAGATTTATTATTTGATCATTGAAAGGTATTTTTACTTTTAAAAAAT  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  CTTGTTGCAAGGAGGTTTAAAAAGTAATGTTCATTTCTGCATCAGTTTCAGCCAAATGTTGATATTAAAACCTT  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  TTATTCTTTTTTTTAATTTTTGCCTCTAGATGTGATGCCTTAAGATAAAAACCATTTATTCAACTTAAAAAAAA  3700

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3701  ATCACTTTTTTTTTTTTTTTGAGATGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGCACTATCTCGGC  3774

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3775  TTACTGTAACCTCCACCTCCTGAATTCAAGCAATTCTCCTGCCTCAGTCGCCTGAGTAGCTGGGATTATAGGTG  3848

Query    1  ------------------------------------------------------------------------AT  2
                                                                                    ||
Sbjct 3849  CCCGCCACCATGCCCAGCTAATTTTTTTTTTGTATTTATTTTATTTTTATTTTATTTTGTTTTGTTTTTGAGAT  3922

Query    3  GGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGG  76
            ||||..|||.|.||||.|||||.||||||||.||||||||||||||||||||.|||||||||.|.|||..|.|.
Sbjct 3923  GGAGCTTCACTTTGTCACCCAGGCTGGAGTGCAGTGGCATGATCTCGGCTCATTGCAACCTCAGTCTCCTGGGT  3996

Query   77  TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTT  150
            |||||.|||||||.||||||.||||||..|||||||||.||.|||       ||.||||||||.||||||   |
Sbjct 3997  TCAAGTGATTCTCATGCCTCAGCCTCCCAAGTAGCTGGTATGACA-------GCCACCATGCCTGGCTAA---T  4060

Query  151  TTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG-----  219
            ||||||||||||||||||||..||||||.|||||||||||||||||||||||.||||||||||||||||     
Sbjct 4061  TTTTGTATTTTTAGTAGAGACAGGGTTTAACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAAGTGATC  4134

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4135  CACCCACCTTGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACGTGCCTGGCCTTTTTTTTGTATTTTTA  4208

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4209  GTAGATATGGGGTTTCACCATGTTGCCCAGGCTGTTCTCAAACTCCTGACCTCAAGTGATCCACCCACCTCAGC  4282

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4283  CTCCCAAATCACATTGATTTTTCAATTGAATTTCTACTTTATCTTGGTTTAGATTTTGTAGATAAGTTAGTAAC  4356

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4357  ATTTATACCTTCCTTGTTTCTTTTTATAACATGGAGTTTTTCAGATTTCATGTCTATTTTAGCTTAAATCTAAG  4430

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4431  CTTATATTAATTTTTATTCACATGATTCATTATAATGAGTAGGCCTACTTTGTTCTTATTTAAGTTATATGCAG  4504

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4505  TACATTTTGCCTCAATCATGGAGAGTTAAACATCTCAAATGGTATAGCATAGGGAATTTAGGGAGTGCCCTAGA  4578

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4579  GGGGTATGGGTTTGATATTTGAGATGAAAACACTGATGTGGAGAAAGGATAGCCTTCTGTGTTGACTAATTGTG  4652

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4653  TGTCCTGTCCTTATGGTCCACTCTTAGTGTGACCTTGAATTTATGGCAGGTAGCAAAATTCTATTTTGCTGATT  4726

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4727  TGAGTATTTTATTTTAGCTTCTTTAGATGTATTTCCCTTCTTCAGTTTCTTGTTGTATTATTGCACCATAGATA  4800

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4801  TTAACACGAATATATTTTTAAAAACTGCCCAGAGATCATTTGATCTCAAGTGTATATACACTTCACTTTTCTGG  4874

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4875  AGTTACAGAAGGATGGTGAAATAATCATTTTCTGGATTTTGCTTTTCAGAGGGAGATTGAAGAAAGTTCAATAG  4948

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4949  AACACTGATGAGCTCATAAGAACCGTGTCGTTCATGTTTCTTTGTAATTCAGTTTGCTGTTTTTATTCTTATTC  5022

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 5023  CTTTCTAGGAAGTACATTCCACAGGCTTCTATGGAAATTAAGTTGAAATAAATTTTGATAATTGGCCTTTGATG  5096

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 5097  CAAAATTTATGCATAGCATTTAATTTTATAACATTTTGTTTTATTCTGTGATTAAATATATATATGTATATGTT  5170

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 5171  TTAAAGTCTTATATGTGGTGAACATTCTCCTCTTTTTTTAGTTCTCACTATTAATAGAAAAAAATATATATTTT  5244

Query  220  ----------  219
                      
Sbjct 5245  AAAAACAAAA  5254

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