Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12783
- Subject:
- NR_144395.1
- Aligned Length:
- 3168
- Identities:
- 188
- Gaps:
- 2953
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTTTTTTTTTTTTTTTCTAATTTTTGGTTGGTGGCGGCGGTGCTGGGCCAGGGGAAGGAAGGGACACGGAGGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCCCTCGCCCCGCCACCTCCTACCAGCTTCCCCCCAGCCCCGGCTCCGGGAGATGTGCCGGGCGGGGGGCCCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTTCGCCGAGCCGCAGGAGAGACACGCTGGGCCGACCCCAGAGCGGCGCTGGACAGAGCCAACACAGATCTATA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GATTTCTTTGAACTCGGAATCTCATAGCACCAATATTTTTGCACAGAACTCTTACTTACATGTCTCATCGAAAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCCAGAACAAACATCAAAAGGAAAACATTTAAAGTTGATGATATGTTATCAAAAGTAGAGAAAATGAAAGGAGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCAAGAATCTCATAGCTTGTCAGCTCATTTGCAGCTTACATTTTTGGTTTCTTCCACAAAAATGATAAGCCATC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACCAAACTCAGAAAATGAACAAAATTCTGTTACCCTGGAAGTCCTGCTTGTGAAAGTTTGCCACAAAAAAAGAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGGATGTATGTTGTCCAATAAGGCAAGTTCCCACAGGTAAAAAGCAGGTGCCTTTGAATCCTGACCTCAATCAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACAAAACCTGGAAATTTCCCGTCCCTTGCAGTTTCCAGTAATGAATTTGAACCTAGTAACAGCCACATGGTGAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTCTTACTCGTTGCTATTTAGAGTGACTCGTCCAAGAAGAAGAGAGTTTAATGGAATGATTAATGGAGAAACCA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGAAAATATTGATGTCAGTGAAGAGCTTCCAGCCAGAAGAAAATGAAATCGTGAGGATGGGGAAAAGACATTTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TTGCACAAATGACAGTATTTGATAAAAACAGAGTTTCACTCTTGTTGCCCAGGCTGGAGTGCAGTGGCATGATC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TGGACTCACTGCAACCTCCACCTCCCAGGTTTAAGCAGTTCTCCTGCCTGAGCCTCTCGGATTACAGACGGAAT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTTGCACTGTCTCCCAGGCTGGAGTGCAGTGGCACGATCTCTGCTCACTGCAACCTCCGCCTCCAGGCTTCCAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGATTCTCCTGCTTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCACCTCACCACACCCAGCTAATTTTTAGTA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TTTTTAGTAGAGACGAGGTTTCACTATGTTGGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCTGCCCACCT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CGGCCTCCCAAAGTGCTGGGATAATATGCATGAGCCACAGTGCCCGGCCTATGCTTTTTTTCTTTTTTTTGAGA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CGGAGTCTCGCTCAGTCACCCAGGCTGGAGTACAGTGGCGCGATCTCAGCTCACTGTAACCTCTGCCTCCCAGG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTCAAGCAATTCTCATGCCTCAGCCTCCTGAGTGGCTGGGATTATAGGTGTGTGCCACCACACCCTGCTAATTT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TTTTTTTCTTTTTGAGACGGGTCTTGCCCTGTTGCCAGGCTGAAGTGCAATGGCTCACTGCAACATTTGCCTCC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CGGGTTCAAGTGATTCTCCTGCCTCACTCTCCCTAGTTGCTGGGATTACAGGTGTGCACTACCACATCCAGCTA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 ATTTTTGTATTTTTAGTAAAGATGGGGTTTCACCATGTTGGCCAGGGTGGTGTCTTGATCTCCTAACCTTGTGA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TCCACCCACCTCAGCCTCCCGAAGTGCTGGGATTACAGGCGGGAGCCATTGCGCCTGTCCTAATATTTGTATTT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TTAGTAAAGATGGGGTTTTACCAGGTTGACCAGGCTGGTCTCGAACTCCTGACCACAAGTGATCCAACCGCCTC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GGCCTCCCAAAGTGCTGGGATTACAAGTGTGAGCCACTGCGTCCAGTCTCTTGGCCTCTAAAATTTTTTTTTTT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TTTGAAACGGAGTCTTGCTGTGTCGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCACTGCAAGCTCCGCC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACCACAGACACCCACCACCATGTCCGG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CTAATTTTTTTATTTATAGTAGAGATGGGGTTTCACCATGTTAGCCAGGATGTTCTCAATCTCCTGACCTCGTG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 ATCCGCCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAAGTGTGAGCCACCGTGCCTGGCCAGGCCTCTAAATT 2146
Query 1 --------------------------------ATGGAGTCTCA--TTC-----TGTCGCCCAGACTGGAGTGAA 35
.|.|||.|.|| ||| |||.||||||.||||||||.|
Sbjct 2147 TTTAAGATTTACTTTTTAATTTTGTGTGTGTGTTTGAGACACAGTTTCGCTCTTGTTGCCCAGGCTGGAGTGCA 2220
Query 36 GTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTA 109
.||||||||||||.||||||||||||||||||||||.|.|.||||||.|||||||||||||.||||||..||||
Sbjct 2221 ATGGCATGATCTCAGCTCACTGCAACCTCTGCCTCTTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTA 2294
Query 110 GCTGGGATTACAGGCACA--CGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCAC 181
|||||||||.||||||.| .||.|||||||||||||.| |||||||||||||||||||||||||||||.|
Sbjct 2295 GCTGGGATTGCAGGCATATGTGCCACCATGCCCGGCTGA----TTTTGTATTTTTAGTAGAGATGGGGTTTCTC 2364
Query 182 CATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG------------------------------------ 219
|||||||..||||.||||||||||||||.|||||||.|
Sbjct 2365 CATGTTGCTCAGGTTGGTCTCGAACTCCCGACCTCAGGTGATCCACCTGCCTCGGCCTACCAAAGTGCTGGGGT 2438
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2439 TACAGGTGTGAACCACTATGCCCAGCCTAAGATTGACTTTTGAGAGATACTCTACTTACCTCTACTTACCAAGA 2512
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2513 GGAAAAGAGATATAAACATATTAAATAACAAGCATTTTATATACATTTCCCAGTTAATCTACGTAATAACCCTG 2586
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2587 TGAATACAGATGAGAAAACTACAGCTACAGGAAATAAAGAAGCCTTCCCACAGTAACACTGCCTATAAATGACG 2660
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2661 GAATAAACTCAGGATGTTTTGAATTCAAAGCTTATGTATGCTCTATGCACTTCACTCTGCTTCCTGAGGCAGGT 2734
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2735 GAGATGTTTTAATATCTACTTGCCTGAATGTTAATGTCTGCCCACAGAAATAAGTCGGAGCTCTGGAGTAGAGA 2808
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2809 ACACCCGATGATTCAGAATCGTTCCGAAGTGCTATATTTCTTCGACTGCTCAGACTGTACCCCTCAAAACCAGC 2882
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2883 TGTCCACTCTTTTTCAAAGCAAAGATATTGAAAACTGTTAGAATCTCTTGAGGGATATCTTCAATACAGACACG 2956
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2957 TTAAATAAAACATGGAAATGGGAGACTACTCTTAGGGGCCATGGTCAAGTTCAATAAAATAAAAGATTCCATTA 3030
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3031 ACAGGGTATCATGATCAGTCCCACAAATTACAAAAGATTTTAGTATATTCCTGCATAATTTTGACATAATAAAT 3104
Query 220 ------------------------------------------------------------ 219
Sbjct 3105 CACACAAGTGTTATCTCTTATCTAATAAAATCATTGTACAAGCAAAAAAAAAAAAAAAAA 3164
