Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12783
- Subject:
- NR_144490.2
- Aligned Length:
- 2096
- Identities:
- 193
- Gaps:
- 1881
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTCTGGGAGTCTTTGGAGTAAGAATGGCCTTGGAAGGGATGAGCAAACGGAAGAGAAAGAGAAGTGTCCAGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGGAGAGAATCCTGACGACGGCGTTCGCGGGAGTCCGCCGGAAGACTACAGGCTTGGACAGGTCGCCAGTAGCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TATTTCGCGGCGAACACCATTCCAGAGGTGGCACCGGTCGGCTGGCGTCCCTCTTCAGTTCTCTGGAGCCCCAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATTCAACCCGTGTACGTGCCTGTGCCTAAAGTAAGTCACTGGGCTTTCTTCCCGAATAGCTCGTTAGAACCACT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TACATACAAAGCAATCTTCTTACCTACCGCGTGAAGCGTGATTTCTAAAGGGGGCAGACAGGATTCATTTTAAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TAACCTTTCATGACTCTTACATACCAGTGAGAGAGAAGAGATTCTCATTTAGAAAGACTGAATTATGGCTTAGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GTCAGAATTCTAGAAGTATGGGGTCTCAAATATAACTTCAAACTTTTAAAAAGCAAACCATCAAAAAAACGAAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGGAATGAGGAGGAAGAAAGTACATCCCAGATTGAAAGACCACTTTCGCAAGAACCTGCCAAAAAAGTGAAAGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GAAGAAGAAACACACTAACGCAGAAAAAAAGTTGGCAGACAGGGAAAGCGCTCTAGCGAGTGCTGATTTAGAAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAGAAATTCACCAGAAACAAGGGCAGAAAAGGAAAAATTCTCAACCTGGTGTTAAAGTAGCAGATAGAAAAATA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTTGATGACACAGAAGACACAGTTGTCAGTCAAAGAAAGAAAATTCAAATCAACCAAGAAGAAGAGAGATTAAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GAATGAGAGAACTGTGTTTGTTGGGAATTTGCCTGTTACATGTAATAAGAAGAAGCTGAAGTCGTTTTTTAAAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AGTATGGACAAATAGAATCTGTACGATTTCGTTCTCTGATTCCAGCAGAGGGAACGCTATCCAAAAAGTTGGCA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GCAATAAAACGTAAAATTCATCCTGATCAGAAAAATATTAATGCCTATGTTGTGTTTAAGGAGGAGAGTGCTGC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CACGCAAGCATTGAAAAGAAATGGGGCCCAGATTGCAGATGGATTTCGTATTAGAGTTGATCTCGCATCTGAGA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCTCATCTAGAGACAAGAGATCGGTTTTTGTGGGGAATCTCCCTTATAAAGTTGAAGAATCTGCCATTGAGAAG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CACTTTCTGGACTGTGGAAGTATCATGGCCGTGAGGATTGTGAGAGACAAAATGACAGGCATCGGCAAAGGGTT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TGGCTATGTGCTCTTTGAGAATACAGATTCTGTTCATCTTGCTCTGAAATTAAATAATTCTGAACTCATGGGGA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GAAAACTCAGAGTCATGCGTTCTGTTAATAAAGAAAAATTTAAACAACAAAATTCAAATCCACGATTGAAGAAT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GTCAGTAAACCTAAGCAGGGACTTAATTTTACTTCCAAAACTGCAGAAGGACATCCTAAAAGCTTATTTATTGG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGAAAAAGCTGTTCTCCTTAAAACGAAGAAGAAAGGACAGAAGAAAAGTGGACGCCCTAAGAAACAGAGAAAAC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGAAATAACAACCAGGAACTGCTTTTTCTTTTCCTGCTGAGTACTGCTAATAAAAGTGCTATTATCTGCTGATA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GCATCGTCTGCTATTCATGTGTTGAGTTTTATACTTCTTTATGGATGGTGTATGTGAAATGTGGAGACTTCCAC 1702
Query 1 -------------------------------------------------------------------ATGGAGT 7
|||||||
Sbjct 1703 ATTCTCAGTTTATTCACATTGTGATACTACCTTTGAAGGTTTTTTTGTTTTTGTTTTGTTTTTTGAGATGGAGT 1776
Query 8 CT--CATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTC-GAGGTC 78
.| | |..||||.|||||.||||||||.||||||.||||||.||||||||||||||||||||| || |.|.||
Sbjct 1777 TTGGC-TGTTGTCTCCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCT-TCTGGGTTC 1848
Query 79 AAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTT 152
|||||.||||||||||||.||||||..|||||||||||||||||||.|..||.||||.|||.|||||| ||||
Sbjct 1849 AAGCGCTTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCGCCTGCCACCACGCCTGGCTAA--TTTT 1920
Query 153 TTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG------- 219
||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct 1921 TTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCA 1994
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1995 CCTGCCTTGGCCTCTCAAAGTGCTGGGATTACAGGCGTGAGTCACTGCACCCAAGCCTCCTTTCTCTTTTGCCT 2068
Query 220 ------------------------ 219
Sbjct 2069 ATTAAACCTCTGCTCTTAACCTTA 2092