Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12783
- Subject:
- NR_145451.1
- Aligned Length:
- 4404
- Identities:
- 190
- Gaps:
- 4189
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTGAGTAAGCTAGAACTGCTGGGCCGGCCTGTGCAGGTTGTTCTGGCTTTTAATCGTTTCCAGTGATTGAAAAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCCAGGCTACCATCCCTCCAAATAACTCCAGTGCTAACTCAAACCTCATATTCACCATTCACTTTCCGGCAGCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TAGAACCTACCGGGGCGCAGGACGTAGTTTTCGTCTTTACCAGAGTGCGTGGCCGGGCGCGGTGGCTCACACCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTCATCCCAGCATTTTGGGAGGCCCAGGCGGTCGGATCGCCTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GTGGTGAAACCCTGTCTCTACTAAAAGCACAAAAATTAGCCAGGCGTGGTGGTGGGCGCCTGTAACCCCAGCTA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTCGGGAGGGTGAGGCAGGGAGAATCGACTGAACCCAGAGGCAGAGGTTGTAGTGAGCCGAGATCATGCCACTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CACTCCAGCCTGGGCAACAGAGTGAGGCTCTGTCTCAAAAAACAAAACAACAACAACAAAACAAAAAAAGAGTG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGAGGACAAAACAGGTGTATATTCCCATTTTATAGATGACATAACTGAGGCCCAAAGAAGGAAAGTGACTCACT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CAGTGTCACAGTAAATCCACGGCAGGACCAGGGCCAGAACAAAAGTCTCCTGAGTGGCACTCTTCACTATCACA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TAACACTGTGGCTCGCAACAGCCCTGGAAGCAAAGCCAGTTGGGGTCACCAGGCACCTAGACCCTCACTGCTTG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCTGCTGGCAGAGAGCCGCTCCTTCTTGTCAGAGTAAGTAGGAAGGAGGCCTTTGCCTGTGCGGACCTATGGTC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGGTGACTCCAGCCAGCACAAACCCATCCCCTGATGGTTGGAGGCTGGGCAAGGGCTTCTTGCAAGATGCGCCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GACAGTGCCTTGTTACAGAGCACCTGCTGTGCTTAGCATTCCACCCGGGGCCAAGAGGCTGTGTGAGCAGGTGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CAGCCAGCCTGGCCCCGCCTGTCACAAGCTGCTAGGTCTGCACCCTTGCCACCCATGGCAGGGGGTCTGACAAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GACTCCCCATTTGTGAGGTCTGTTCACTGCCTGTATTTCGAACAGGGCCTGGCTCTGCAAACCTGTGCAAACTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TGTTGATATAGGAGCCGACATGAGCAAGCAGAGGCTCCCCTGGCTCAGGCAGCCCCAGGTTGGGTTGGCCAGAC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AGCAACCAGGCACAGGGGCCAAGTGCAGGTCCTGCTACCCAGCCACCACAGCTTCCTCTCACCTGATTCTCACA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GCAACCCAGGCAGGATAGGCAGGGTGGGGTTATCTTATTTTGCAGAAACAGGCTTTCCCAAGTCTGTCACCAAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGAGGGGTAGAGCTGGGTGTCCAGCCAGATCTAACCTCCAGCCCAGAGCTGGTGATGCGGAAAATCAGGGCAGA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGGCAGCAGGATCTAAAATAGGGAGGGAAGAAGTCCTCAGTTACGTAACAGCGAGGAGACTCTCAGCCTACGCA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CAGTAGCAACCATGGGGTCCTGCCACTCGAGCCAGACCCTCCTTCCCTTCCCGTTTTGGGCTCTAAGTGCTGCC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CCCTGTGAGAGAATGTGCTGGAGGAGCCCCCAGTATCCTTCCAGCGGGAAGTCGGCTCTGTCAAGGCCATTCCC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GAGAGCAGGCTCTAGGAATTCAAAGACCAAGCAGGCAGAGCTGGATTCTGGAGCTGCCCTCAAAGGGCTTGAGG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GTTATATGAGCGCCGTGCTTGAGAAGTTAGTGATGATTTCTGCTCAAAGAGACAGAGCAAGAGGGCTGAGGGGC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TCTGGTGCTCTGGGGGAGATGAAACAACCCCACAGTATATGAGGCCTCTCTGGTGTGTGCGGGCACTAAGGAAG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GGTGACTTGCGAGTGGCGCATTCGGAGGCACGGGGTGGGCAGCTGTTGAGCAAGGGACCAGGGCTGGGACAGGC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TGCCAGGACCCCCACAACCCCAGGGGAGGAAAGGGGACTCAGCCATCATCATGCCTGACTCCCAGGCTCCCGGA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TGAGGAGCCTGCTAGCCAGGGCTTGAAGCCCTCCAGTGACAGGGGGTGCATTACTTCCTAAGAAGCCATTTCCT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TGGTTCAGAAACGTTTATCCAAAGACTGAGCCGAAATCTACCACCTCACTTAATGTTTTTGGCACCTGGTTATG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 ACCCAGACCTGCACAGAATAATTTAACTCTTCTGAAATAGACTTCCAGATATTTGGAAGTGGCCAAGTCAGGTT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TAAGAGCTCAGGTCTCCCATTTGACAAGATTTCCATCTCCTCGCTGTCTGAACAGGTTTCAGCTGTGGTTATCC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AATCCCTCATTCTTGATGACACACACCAGGCTGAATGGTCTTTAGAGTTCCCCTCAAGCCGCCAAGCGCTCTGA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GACAGGTTTACTAGCTTTGGTGAGATGCTGACACTCCTCACATGCACGTGCCCCTCCCAACTACTCAAGTGAGT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TCGTGGCAAATCTCTCATCTGATCTGCATAAACGGATTATATCTTAGGCGGTGCCATTGTCTGCATTTTACAAA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TAAGGAAACTGAGCCTCAGGGAGGTGAAGTCATTTGCCCAAAATCACAGAGCCAGGAAACGAGAGAGCCAAGAT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CCAGACCCCGCAAGATCCAGACCCCACAAGATCCAGACCCCGCAAGATCCAGACCCCTCAAGATATAGACCCTG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CAAGATCCAGACCTCACAAGATCCAGACCCCACAAGATCCAGACCTCGGCTATCTGGCTTCTCTTTTTTTTGCG 2738
Query 1 ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGA 74
|..||||||||.||||||.|||||.||||||.|.|||||..|||||||.||||||||||||||||||||| |.|
Sbjct 2739 ACAGAGTCTCAATCTGTCACCCAGGCTGGAGCGCAGTGGTGTGATCTCAGCTCACTGCAACCTCTGCCTC-CCA 2811
Query 75 GG-TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAA- 146
|| ||||||.|||||||||||||.||||||.|||||||||||||.|||||....|| |||||||.||||||
Sbjct 2812 GGTTCAAGCAATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATCACAGGTGTGCG---CCATGCCTGGCTAAA 2882
Query 147 ---------TTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTG 211
|||||||||||||||||||||||||||||||||.|.||||||||||.|||||||||||||.||||
Sbjct 2883 TTTTTTTTTTTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCGCTATGTTGGCCAAGCTGGTCTCGAACCCCTG 2956
Query 212 ACCTCAAG------------------------------------------------------------------ 219
||||||.|
Sbjct 2957 ACCTCAGGTGATCCACCTGCCTCGACCTCTCAGAGTGCTGGGATTACAGGCGTGAGCCACTGCACCCAGCCCCA 3030
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3031 TCTGACTTCTATACCCGCAGCCCCTTCCTTTACCCTCAGGCTGCCTCAGTCTCCACACTGGGGCCCAGAGCTGG 3104
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3105 GCTGGACTCAGCGCAGTCAGAACCTCGCCTTGCACGTGGCGAAGGAGCGGCAGGCAGGCAGGCAGGCAGGCAGG 3178
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3179 CAAGCAGGACAGCCAGCTTCCTCCTAGTCCGCAGTTTCGCGGAGCAGCCTGGAAAGGGAGGCCCAGGCTTCCCT 3252
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3253 GTCTCGTCGCACGTGTGTCTGCAGTGTCTGTGCTATCTCCCAGGGGCCTGGATGTCGATGGAATGCCTGAGGGT 3326
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3327 GGAGAGAGCTGTGGCTGAGGCCTACCCTGGCGGCCTCAGCATCTGTGGAGATGTGTAGAGACAGGGAGAGTGAA 3400
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3401 TGGGGACCAACCTCAGGAGATGCTGGGTCCCAGAAGCACCATGTGCTTCTCCTTTGGTGAGACTTAATTACTCT 3474
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3475 CTAAAATGTAAGGCTACTCCCACTTATCAAATTATAGATGAGTTTAATTACAGCACACTGAGTAACCACACTGG 3548
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3549 GCTCCTTCAGAAATAGCAGCAGGCTGGTTGCTCTTCTCAGCTTCAGCTGTAGCCACCCCAGTTTCAGGAGGAAG 3622
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3623 TGCCCGTGGTTCCTGGGGCCTGGAAGTGCCGCTCAACTCTGCTGCCAGACAAGTGCGGGCGTGGTGGACTGCAC 3696
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3697 TGGGTACACTGCTGTACCGGCCACCACCCTCCGGCCACTCTCAGCCGGTGAGTGCTCTGCGGGGCCATCTGGCC 3770
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3771 ACGTGTTCTGTGACTGGGTCATTTACTCTGCTGCAACCTCTCTTTCTCCTACCTACATCGTGTTCTGGATAAAG 3844
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3845 GTTTTGGCTCATAATGTCCGACCAGAGGTGGACAAAGTGGTGTGGGACCTGCCGTAAGAAACAGGGAGCATGGT 3918
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3919 GCGGGGAGAGAAGCCTGTGCCTTATGGAGACTCGGGGCACCTTCAGGAAGCAGGGTCAACAGCAGCAGGCCGCT 3992
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3993 AGGGAGTCGGGAGAGCTCGGTGATGTCACGAGGGGCATCAGACTCTTCCCTGCAGGCTGGCGGGACTGATGGGC 4066
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4067 TCTCGTTCCAATGGAGGTACAATGGGACTTCCGGGGCTGTGATGGGAAGGGCGGAGGAGCTGCCGATGGTCCCA 4140
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4141 GTGCCATATTAGTGTCACATTCTGAGGGGCAGCCCTGTGCCGGACGGCAGCTGCTACCTCTCCCTCTGCCCCTT 4214
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4215 TATTACTTGAATCTCTTCGTTGTGCCCTGTCTAGGCACGGTCGTCCGACAGCAGGCAGCCCACTGCCCTCCCAG 4288
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4289 AGCTCACTGTCTAGCCCAGGGTGACACAGGGTAACCGTGGGCATGACTTGGGCCGGGAAGTGAGAGGCTCGATT 4362
Query 220 -------------------------------------- 219
Sbjct 4363 CCATCACATGTAAATAAAAATACTCATTTTCAATCTAA 4400
