Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12783
- Subject:
- NR_145699.1
- Aligned Length:
- 2883
- Identities:
- 190
- Gaps:
- 2669
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACTCGCCGAGGGGGAGGGGCTGGAAGATGGCGGCGGACGCACACCCACCCGACCGCGACAGAGCTTAGGCCCCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGCCCGCGCCGCCGCCCGCTGCTCGCAGCCACTGTGGGCAGCCCTGCTCTGTCCCGCGTTGCTGGTAGAGCCGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCGCGGAGGCGTGGGACCAGGGTGGCGTCCGCATCCCCTGCCAGCGCGCCTTCGCCCGGGTCCGTCCAGGGAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CACCTGTGCACGGCCATATTGGATTCTGTGCCCCAGTCACTGCCTCAGCGCGGCGGGAAAGGAGAGGAGTTCAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CAATTTTTATGAATTTCTAATCCAACCTCATCATCCTATGGGAAACAGAAGACCACCAAGAACAGCCAGCTGAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACAGAATTTCACTGTGTTGCCCAAGCCAATCTTAAACTCCTGGTCTCAAGCGATCCTCCTGCCTTGGCCTCCCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTGTGCCTGGCCTATGGACTCTGAATTTTTTTAAAAGACTGGAAAAAACTTTTATAAGAGAATTGGAAATTTGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACAATGGAATCTCATTCTGTCACCAGGCTGAAGTGCAGTGACGTGATCTTGGCTCACTGCAACCTCCACCTCCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTATCTTGGCAGTAACCTCCTCCA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TATATTTCCTTGGCCCTCAGCTTACATCTAGCAAAATGACTCTACTGGTTCCAGGCTTCACATGCATACAACAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGTGTTGGAGGAACAGAGATGTTTTCTCTTCCTGGTGTTTTCCCAGACATTTCTTAGCTGGCATTTCAAACAAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGTCCTGAAATTCACCCTGGTTGGGTCGTGTTCTCCCCTTCCCATTCCCCATCCCCACCCTCAACCGAAAAATG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATGTAAGCAGGGGAAATTGAATGTACCAATGTTTGTTTTTAAACAAGCCACAGACCCCTCCCCAACTCCCCGAC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGAAGCTTGAAGTGGGATCAGCTTTCCCTAAAGTACTTGAGCTTATGGTAAAGCATATATGTTATCCAAGTTAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGTCTGGACGCTGTTAGTAATGGGAAGGCAAGTAATGAATGTTAGCTATGGAGCCAACAGACAGTGTCCACTCC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ATTGTCTTTAAGGCCCAACTAAAGATAACCTCTTTACCAATGTCGGTTTATTTATTCATTTATTTATTCATTGA 1184
Query 1 -ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCG 73
|||||||||||.|||.||.||||..||||||||.|||||.||||||||.|||.|||||||..|||||||| |.
Sbjct 1185 GATGGAGTCTCACTCTCTCACCCAAGCTGGAGTGCAGTGGAATGATCTCAGCTGACTGCAATTTCTGCCTC-CC 1257
Query 74 AGG-TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAA 146
||| |||||| |.||||||||.||.||||||..|||||||||||||||||||.|||.|.|||||||||||||||
Sbjct 1258 AGGTTCAAGC-AATCTCCTGCTTCAGCCTCCCAAGTAGCTGGGATTACAGGCGCACACCACCATGCCCGGCTAA 1330
Query 147 TTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG- 219
||||||||||||||||||||||.||||||||||||||||||||.||||||||||.||.||||||||||||
Sbjct 1331 ---TTTTTGTATTTTTAGTAGAGATAGGGTTTCACCATGTTGGCCAAGCTGGTCTCGGACACCTGACCTCAAGT 1401
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1402 GATCTGCCTGCCTCGGCCCCCAAAGGTGTGAGCCACTGCACCTGGCTACAATGTCAGTTTCTATAAAAACTGCC 1475
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1476 TTGACTTGTTTTGTTTGCTTGTTTTGTTTGTTTGTGTTTTAATTTTTATTATTTTTTTTTAGAGACAGGGTCTC 1549
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1550 AATCTGTTGTCTAGGCTTGAGTGCAGTGGTGCAATCATAGCTCACTGAAGTGTTGGACTCCCAGGCTCAAGCAG 1623
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1624 TCCTCCCACCTCAGCCTCCCAAGTAGCTGAGACTACAGGCATGCACCACCCTGTCTGGCTAATTTTTTATTTTT 1697
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1698 AGTAGAGATGAGGTCTCACTATGTTGCCCAAGGTGGCCTCAAACTCCTGGCCTCAAGTACTCCTGTGGCCTTAG 1771
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1772 CCTCCCAAAGCTCTGGGATTGCAGGTATGAGCCGCCATGCCTGGCCTACTGTATATTTTATGCATTTGATATAA 1845
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1846 GTCTTGCCTCCCTAAGTATATTACAAGTCCCTTGAAGTTAAAGACATTAGATTCCTACTCAGTGCTGAGCTGCA 1919
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1920 ACAGAGAGCACTCAATGATGGATAAAATAGTTTTAGCATGCATTCAGCGATATATATTTAGAAAGTGGAACTAG 1993
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1994 GTGGTTGAAAAAAGTGTATAGATGGGTGGAAGGGAATATTACAGCTCTTAGAATTGTCCTAAGGTGAGAGTAAC 2067
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2068 AAATTAAGCAATGAGTCCCTGGGTTCACTCAAGCAACTTCACTCTCTAAAACAAGAGCCCACAGAATCCCATTT 2141
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2142 CTGCTTTCAGAATGAGTTTGAGGCCAATATTATTTCCATTTTTTTTCTTTTTCTTTCTTTCTTTTTTTTTTTTT 2215
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2216 TTTTTTTGAGACGGAGTTTCACTCTTGTTGCCCAGGCTGTTTTGATCTCGGCTCACTGCAACCTCTGCCCCTGG 2289
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2290 GTTCAAGCGATTCTCCTGTCTCAACCTCCCAAGCTGGGATTACAAGCATGCGCTACCACACCTGGCTAATTTTG 2363
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2364 TATTTTTAATAGAGACGGGGTTTCTCTGTGTTGGTCAGGCTGGTCTCAAACTCCCAACCTCAGGTGATCTGCCC 2437
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2438 ACCTTGGCCCAGCCTCCAATATGATTTTCTAATAGCTGTGTTTGATGATTATATTTATTCCTCCATCAGTAGCT 2511
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2512 TTTTTAGCCTTGAAAATATCTATTTAAGTTTCTTATTTCCTTTGGATCTATCAAAGTGTTTTTCCCCAAGTGGC 2585
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2586 ACCTGGGAAAACATATTCTATTCATTTATTTTATAACTGTTCCCTTGACCTCTTTATTGCTTCCCTATTACAAC 2659
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2660 CCAAGATGCTCTTGTAAACCTGACTTAATATTGGCAGTCTTCATCCCTTGCAAATGGAAGTGATGACAGACCCA 2733
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2734 ATACTTTGTGTAAAAATATTTTGCTATTTCTATACAAAATATTTTATTAATGGAAACCACATGTTATGTATTTT 2807
Query 220 ----------------------------------------------------------------------- 219
Sbjct 2808 ACATATGTTATGACTTGAAATTTATGTTATGACTTGAAATTGGGGAATCTGATATGTCTCTAATAATAAAG 2878
