Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12783
- Subject:
- NR_145705.1
- Aligned Length:
- 2856
- Identities:
- 190
- Gaps:
- 2642
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTTGTGGGAAACCGCGCTGGACGCTGAGAATGTGCGGAAGGATCCTGAGGGGAGGACGCGAGACAGCGCGAGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAGACGAGGAGAGTTAGGGTTGGCCGGGAGGGTGCGAAGATGAAGCGACCACTGGAGGCTGTGAGGGTGAAAGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGCAAGAATCGTCTAGAGACGGGCTGGGCCGGTGCTGGGGCCAAAGGCTTCTGTCTGTCAGGCCCTTTTTGGCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTCACTCTAGAAAGAAGAGGCGGAGACGCGAAGAGATCGGAGTTCAACAATTTTTATGAATTTCTAATCCAACC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCATCATCCTATGGGAAACAGAAGACCACCAAGAACAGCCAGCTGAGACAGAATTTCACTGTGTTGCCCAAGCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AATCTTAAACTCCTGGTCTCAAGCGATCCTCCTGCCTTGGCCTCCCACTGTGCCTGGCCTATGGACTCTGAATT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTTTTAAAAGACTGGAAAAAACTTTTATAAGAGAATTGGAAATTTGGACAATGGAATCTCATTCTGTCACCAGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTGAAGTGCAGTGACGTGATCTTGGCTCACTGCAACCTCCACCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTCCTGAGTAGCTGGGATTACAGGTATCTTGGCAGTAACCTCCTCCATATATTTCCTTGGCCCTCAGCTTACAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTAGCAAAATGACTCTACTGGTTCCAGGCTTCACATGCATACAACATGGTGTTGGAGGAACAGAGATGTTTTCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTTCCTGGTGTTTTCCCAGACATTTCTTAGCTGGCATTTCAAACAAGGGTCCTGAAATTCACCCTGGTTGGGTC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GTGTTCTCCCCTTCCCATTCCCCATCCCCACCCTCAACCGAAAAATGATGTAAGCAGGGGAAATTGAATGTACC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AATGTTTGTTTTTAAACAAGCCACAGACCCCTCCCCAACTCCCCGACTGAAGCTTGAAGTGGGATCAGCTTTCC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTAAAGTACTTGAGCTTATGGTAAAGCATATATGTTATCCAAGTTAAAGTCTGGACGCTGTTAGTAATGGGAAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GCAAGTAATGAATGTTAGCTATGGAGCCAACAGACAGTGTCCACTCCATTGTCTTTAAGGCCCAACTAAAGATA 1110
Query 1 ------------------------------------------------ATGGAGTCTCATTCTGTCGCCCAGAC 26
|||||||||||.|||.||.||||..|
Sbjct 1111 ACCTCTTTACCAATGTCGGTTTATTTATTCATTTATTTATTCATTGAGATGGAGTCTCACTCTCTCACCCAAGC 1184
Query 27 TGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGG-TCAAGCGATTCTCCTGCCTCGGC 99
|||||||.|||||.||||||||.|||.|||||||..|||||||| |.||| |||||| |.||||||||.||.||
Sbjct 1185 TGGAGTGCAGTGGAATGATCTCAGCTGACTGCAATTTCTGCCTC-CCAGGTTCAAGC-AATCTCCTGCTTCAGC 1256
Query 100 CTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGG 173
||||..|||||||||||||||||||.|||.|.||||||||||||||| ||||||||||||||||||||||.|
Sbjct 1257 CTCCCAAGTAGCTGGGATTACAGGCGCACACCACCATGCCCGGCTAA---TTTTTGTATTTTTAGTAGAGATAG 1327
Query 174 GGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG---------------------------- 219
|||||||||||||||||||.||||||||||.||.||||||||||||
Sbjct 1328 GGTTTCACCATGTTGGCCAAGCTGGTCTCGGACACCTGACCTCAAGTGATCTGCCTGCCTCGGCCCCCAAAGGT 1401
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1402 GTGAGCCACTGCACCTGGCTACAATGTCAGTTTCTATAAAAACTGCCTTGACTTGTTTTGTTTGCTTGTTTTGT 1475
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1476 TTGTTTGTGTTTTAATTTTTATTATTTTTTTTTAGAGACAGGGTCTCAATCTGTTGTCTAGGCTTGAGTGCAGT 1549
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1550 GGTGCAATCATAGCTCACTGAAGTGTTGGACTCCCAGGCTCAAGCAGTCCTCCCACCTCAGCCTCCCAAGTAGC 1623
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1624 TGAGACTACAGGCATGCACCACCCTGTCTGGCTAATTTTTTATTTTTAGTAGAGATGAGGTCTCACTATGTTGC 1697
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1698 CCAAGGTGGCCTCAAACTCCTGGCCTCAAGTACTCCTGTGGCCTTAGCCTCCCAAAGCTCTGGGATTGCAGGTA 1771
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1772 TGAGCCGCCATGCCTGGCCTACTGTATATTTTATGCATTTGATATAAGTCTTGCCTCCCTAAGTATATTACAAG 1845
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1846 TCCCTTGAAGTTAAAGACATTAGATTCCTACTCAGTGCTGAGCTGCAACAGAGAGCACTCAATGATGGATAAAA 1919
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1920 TAGTTTTAGCATGCATTCAGCGATATATATTTAGAAAGTGGAACTAGGTGGTTGAAAAAAGTGTATAGATGGGT 1993
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1994 GGAAGGGAATATTACAGCTCTTAGAATTGTCCTAAGGTGAGAGTAACAAATTAAGCAATGAGTCCCTGGGTTCA 2067
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2068 CTCAAGCAACTTCACTCTCTAAAACAAGAGCCCACAGAATCCCATTTCTGCTTTCAGAATGAGTTTGAGGCCAA 2141
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2142 TATTATTTCCATTTTTTTTCTTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTGAGACGGAGTTTCACTCTTG 2215
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2216 TTGCCCAGGCTGTTTTGATCTCGGCTCACTGCAACCTCTGCCCCTGGGTTCAAGCGATTCTCCTGTCTCAACCT 2289
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2290 CCCAAGCTGGGATTACAAGCATGCGCTACCACACCTGGCTAATTTTGTATTTTTAATAGAGACGGGGTTTCTCT 2363
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2364 GTGTTGGTCAGGCTGGTCTCAAACTCCCAACCTCAGGTGATCTGCCCACCTTGGCCCAGCCTCCAATATGATTT 2437
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2438 TCTAATAGCTGTGTTTGATGATTATATTTATTCCTCCATCAGTAGCTTTTTTAGCCTTGAAAATATCTATTTAA 2511
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2512 GTTTCTTATTTCCTTTGGATCTATCAAAGTGTTTTTCCCCAAGTGGCACCTGGGAAAACATATTCTATTCATTT 2585
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2586 ATTTTATAACTGTTCCCTTGACCTCTTTATTGCTTCCCTATTACAACCCAAGATGCTCTTGTAAACCTGACTTA 2659
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2660 ATATTGGCAGTCTTCATCCCTTGCAAATGGAAGTGATGACAGACCCAATACTTTGTGTAAAAATATTTTGCTAT 2733
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2734 TTCTATACAAAATATTTTATTAATGGAAACCACATGTTATGTATTTTACATATGTTATGACTTGAAATTTATGT 2807
Query 220 -------------------------------------------- 219
Sbjct 2808 TATGACTTGAAATTGGGGAATCTGATATGTCTCTAATAATAAAG 2851
