Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12783
- Subject:
- NR_145706.1
- Aligned Length:
- 2786
- Identities:
- 190
- Gaps:
- 2572
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTTGTGGGAAACCGCGCTGGACGCTGAGAATGTGCGGAAGGATCCTGAGGGGAGGACGCGAGACAGCGCGAGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAGACGAGGAGAGTTAGGGTTGGCCGGGAGGGTGCGAAGATGAAGCGACCACTGGAGGCTGTGAGGGTGAAAGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGCAAGAATCGTCTAGAGACGGGCTGGGCCGGTGCTGGGGCCAAAGGCTTCTGTCTGTCAGGCCCTTTTTGGCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTCACTCTAGAAAGAAGAGGCGGAGACGCGAAGAGATCGGGTTAGAGTCAGATTTTCGAAGCACGGAGATGGGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCAATGAAAGGACGAGGAAAGACGAGAAACCAGCGGCCGGAGAACGGAGAGTTCAACAATTTTTATGAATTTCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AATCCAACCTCATCATCCTATGGGAAACAGAAGACCACCAAGAACAGCCAGCTGATGGAATCTCATTCTGTCAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CAGGCTGAAGTGCAGTGACGTGATCTTGGCTCACTGCAACCTCCACCTCCTGGGTTCAAGCGATTCTCCTGCCT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAGCCTCCTGAGTAGCTGGGATTACAGGTATCTTGGCAGTAACCTCCTCCATATATTTCCTTGGCCCTCAGCTT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACATCTAGCAAAATGACTCTACTGGTTCCAGGCTTCACATGCATACAACATGGTGTTGGAGGAACAGAGATGTT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TTCTCTTCCTGGTGTTTTCCCAGACATTTCTTAGCTGGCATTTCAAACAAGGGTCCTGAAATTCACCCTGGTTG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGTCGTGTTCTCCCCTTCCCATTCCCCATCCCCACCCTCAACCGAAAAATGATGTAAGCAGGGGAAATTGAATG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TACCAATGTTTGTTTTTAAACAAGCCACAGACCCCTCCCCAACTCCCCGACTGAAGCTTGAAGTGGGATCAGCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTCCCTAAAGTACTTGAGCTTATGGTAAAGCATATATGTTATCCAAGTTAAAGTCTGGACGCTGTTAGTAATGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GAAGGCAAGTAATGAATGTTAGCTATGGAGCCAACAGACAGTGTCCACTCCATTGTCTTTAAGGCCCAACTAAA 1036
Query 1 ----------------------------------------------------ATGGAGTCTCATTCTGTCGCCC 22
|||||||||||.|||.||.|||
Sbjct 1037 GATAACCTCTTTACCAATGTCGGTTTATTTATTCATTTATTTATTCATTGAGATGGAGTCTCACTCTCTCACCC 1110
Query 23 AGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGG-TCAAGCGATTCTCCTGCCT 95
|..||||||||.|||||.||||||||.|||.|||||||..|||||||| |.||| |||||| |.||||||||.|
Sbjct 1111 AAGCTGGAGTGCAGTGGAATGATCTCAGCTGACTGCAATTTCTGCCTC-CCAGGTTCAAGC-AATCTCCTGCTT 1182
Query 96 CGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAG 169
|.||||||..|||||||||||||||||||.|||.|.||||||||||||||| ||||||||||||||||||||
Sbjct 1183 CAGCCTCCCAAGTAGCTGGGATTACAGGCGCACACCACCATGCCCGGCTAA---TTTTTGTATTTTTAGTAGAG 1253
Query 170 ATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG------------------------ 219
||.||||||||||||||||||||.||||||||||.||.||||||||||||
Sbjct 1254 ATAGGGTTTCACCATGTTGGCCAAGCTGGTCTCGGACACCTGACCTCAAGTGATCTGCCTGCCTCGGCCCCCAA 1327
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1328 AGGTGTGAGCCACTGCACCTGGCTACAATGTCAGTTTCTATAAAAACTGCCTTGACTTGTTTTGTTTGCTTGTT 1401
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1402 TTGTTTGTTTGTGTTTTAATTTTTATTATTTTTTTTTAGAGACAGGGTCTCAATCTGTTGTCTAGGCTTGAGTG 1475
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1476 CAGTGGTGCAATCATAGCTCACTGAAGTGTTGGACTCCCAGGCTCAAGCAGTCCTCCCACCTCAGCCTCCCAAG 1549
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1550 TAGCTGAGACTACAGGCATGCACCACCCTGTCTGGCTAATTTTTTATTTTTAGTAGAGATGAGGTCTCACTATG 1623
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1624 TTGCCCAAGGTGGCCTCAAACTCCTGGCCTCAAGTACTCCTGTGGCCTTAGCCTCCCAAAGCTCTGGGATTGCA 1697
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1698 GGTATGAGCCGCCATGCCTGGCCTACTGTATATTTTATGCATTTGATATAAGTCTTGCCTCCCTAAGTATATTA 1771
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1772 CAAGTCCCTTGAAGTTAAAGACATTAGATTCCTACTCAGTGCTGAGCTGCAACAGAGAGCACTCAATGATGGAT 1845
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1846 AAAATAGTTTTAGCATGCATTCAGCGATATATATTTAGAAAGTGGAACTAGGTGGTTGAAAAAAGTGTATAGAT 1919
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1920 GGGTGGAAGGGAATATTACAGCTCTTAGAATTGTCCTAAGGTGAGAGTAACAAATTAAGCAATGAGTCCCTGGG 1993
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1994 TTCACTCAAGCAACTTCACTCTCTAAAACAAGAGCCCACAGAATCCCATTTCTGCTTTCAGAATGAGTTTGAGG 2067
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2068 CCAATATTATTTCCATTTTTTTTCTTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTGAGACGGAGTTTCACT 2141
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2142 CTTGTTGCCCAGGCTGTTTTGATCTCGGCTCACTGCAACCTCTGCCCCTGGGTTCAAGCGATTCTCCTGTCTCA 2215
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2216 ACCTCCCAAGCTGGGATTACAAGCATGCGCTACCACACCTGGCTAATTTTGTATTTTTAATAGAGACGGGGTTT 2289
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2290 CTCTGTGTTGGTCAGGCTGGTCTCAAACTCCCAACCTCAGGTGATCTGCCCACCTTGGCCCAGCCTCCAATATG 2363
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2364 ATTTTCTAATAGCTGTGTTTGATGATTATATTTATTCCTCCATCAGTAGCTTTTTTAGCCTTGAAAATATCTAT 2437
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2438 TTAAGTTTCTTATTTCCTTTGGATCTATCAAAGTGTTTTTCCCCAAGTGGCACCTGGGAAAACATATTCTATTC 2511
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2512 ATTTATTTTATAACTGTTCCCTTGACCTCTTTATTGCTTCCCTATTACAACCCAAGATGCTCTTGTAAACCTGA 2585
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2586 CTTAATATTGGCAGTCTTCATCCCTTGCAAATGGAAGTGATGACAGACCCAATACTTTGTGTAAAAATATTTTG 2659
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2660 CTATTTCTATACAAAATATTTTATTAATGGAAACCACATGTTATGTATTTTACATATGTTATGACTTGAAATTT 2733
Query 220 ------------------------------------------------ 219
Sbjct 2734 ATGTTATGACTTGAAATTGGGGAATCTGATATGTCTCTAATAATAAAG 2781
