Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12783
- Subject:
- NR_145834.2
- Aligned Length:
- 6671
- Identities:
- 188
- Gaps:
- 6455
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTCGCTGCTGCCGCCGCTAAGGGAGAGGAGCATGTCTGCAACTCGAGCCAAGAAAGTGAAGATGGCCACCAAAT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CATGCCCCGAGTGCGACCAACAGGTTCCTGTTGCATGTAAATCATGTCCTTGTGGTTACATATTTATTAGCAGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAACTTTTAAATGCAAAACACTCAGAGAAATCACCACCTTCTACAGGTAACTAGAAACAGGAAAAGGAAATTGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CATCTATGCTAACCTGTCTGATGAAAAGGCTTTCGTGTTTTCAGTCGCCTTGGCAGAAATAAATAGAAAAATTA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCAATCAAAGACTTATTCTCTGATACTTGTTTGCAAAATCTGCTGAAACTTCTGTCAGGATAACATCAGCAAAT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCTCAAACAGTTATGGACTCTCAGGAGCATTCTGACTGCATCAATAAGGGCCATCGATTGTTTCTTTCTCGCCT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GTCGTTTAGCCTGTGCCACACTTCGGGAGCAAAGCTGTGTAGGCTTGGACTGTTCTGGGATTTCCTTGTTTACC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AAGGAGTATTGTCAGTGTTTTGTGTTTGGGATATAAGTAAGTGTATTTGCCAACAACAAAAAAAAACCAACAAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AATGCTGGATGGATGTTAAAGGATAAAAAGTGATGGGGTATGGGGTAGGTATGAAAACTAGGGTAATAAGATGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TTGATTGTTTTCAGGTTTGCCACCAGAGATGCAATATTTTAAATACTGTCAGAAAGAGTGATTTTTAAAAATAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ATATTTCAGATTTTCAGTGCTAACAGATTGCATATATACAGTTCATTTACTTTTATTAAATTGGCAATCGATAT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TTTATTGAATGGGGAATTAAGAATATAAACTGTAAATTTTGTCTTAAATTGATTTTTTTTCTTGGCCTTTATTT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTATTACTTAAGGTATGAGTTATATTTTAGGAGATACTTTCTAGACAGTTTGAAGTTTGGGTGCTATATGAAGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AAAACATTTAATGATATACTCAGATATAAACACCTTGTTTTCTTGAATGTAATTTATTTATTAGCTAAAAAAAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AAAACAAACTGCTCTCAAGATGGTGCCTGTTAACCTAAACATGAAATATATTTATTACATGCAAAATATTTCTT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGCCACTTTTAAGCAGTAATGTTTTATCTGAATGGATATTTGTTTCTATATCCTGATAATTATTTAAATTGTTA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CTTTCAATCTGGAAGAAAAAATAAACCTTAATATTGAAACTAAGTAGATTAAATAGTGTGATAAAAGTTTTTTG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TTCTGGTGAAGTTTGTGAAATATATTTAAATTCTTAATTTTTCTAGTGTTAAGTCATAATCGTTTATAGTTGAT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TTATATTAAATGCTTTTGCATTTTGGCATATCAATTTAATGATTAACATATTCAAACTTGGTAATCACTCCCCT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TATTTTCAGTCGCTCTTCCCCCAATCTGTTTAGAAATCCTTTTAAAGCCTTCTTACAGAAGATAGTCATCAGTT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGATTTAGCCCCCTTTTAAGAGAATCTCCCTTTCAATTTTAGCCGTAACATTATCAATTTCAGACTTCATCCTG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CATCTCCCATCACCTCCTCAAAGAAAAAAGGTCAACATTTTTTCCTACTTTATTTAAATGGTAACCAGCAGAGG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GAGCTTAAGAGGTACTCTAGATAGGATAAAGAATTTTCCTAAGGATTCCTTTTCCTTTAATCCCTGTATCTATC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TGCAGGTACTACTGCAACTATTTTGTATGCATTTTATTTATTTATTTAGGAGACAGAGTCTTGCTCGGTCGCCC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AGGCTGGAGTGCAGTGGCACTGTCTCAGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGTGATTCTTATGCCTC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AGCCTCCTGAGTAGCTGTGACTAGAGGCGTGCGCCACCACGCCTGGCTGTTTTTTTTTTTGTATTTTTTAGTAC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AGATGGGGTCTCAGCATGTTGGCCAGGCTGGTCTCAAATTCCTGGCCTTAGGTGATCTGCCCGCCTTGGCCTCC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CAAAGTGCTGGGATTACAGGCATGAGCCACTGCACTCAGCCTTGTGTGCGTTTTAGAGTCTTAACTAGTAGTTT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CCCCAATAATGTAATGTGATTTTATCTTTGAAACATACTGTAAGGAAACTTTTGATTTTAAGTAAAAAAGCTTA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AAAATGATTAATATCTAAAAATGCTTGTATACATATATATGTCCTCAGAAAAAGCAAGAACAGCTTGTGGAATA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 AGCACGTCTTTAAGGAATTATCGATGTCAGAGTCTATCCATTTAAAGCTGAAGACCATTACAGGAAAGTCATGT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TAAAATATTCATTGGATATGGTAAAGGAGGTACTGGTGGCTGGGCTGGAGCTTGCCGTATAGAAAAGTAATTAC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TTCAGATCTCATAATGTTAAATTATTGGCTTATTTAAAAATTTCCGTGGCAGAGAGGCAAATTAGGTTTCCTCT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GTGACATAACCTATTTAACCAATTTTTCAAAAAATTGTACTCTATGAGCTTTCTTGTTATAAAGCTAAAAAATT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TAATTTGTCTAGGCATGTTGTAATGGTCCCAGAAAATATTACTTTGTCACTGGTGTCAGAGAAACCTCTGTCAT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CAGCAGATGTCCTAAGAGTATAATTATAGTTCTTTACTTAATCCAAAATTTGTTCTGCTCTGATATCTATAAAT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GATATGATTATTCAAAATACCTTGAAATGATTCCACAATTAGATTAGGTCTGTTGAAGATAACTTATTCTTAAA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TATGAGTAAGATTAAATAAAAGTAGTTTGAGAGTTGTTACTCCCTGCCTCAACTCCATGGTATTCCAAAATGTT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TTTGTGGGCACTTTAATACTTGTAGTTTGATTTTGTTTGTTAGTTTTAGAAATGAACATTTCTTAGATTTTCAT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GGGTATTTTTTGGCTGTATTTAAATGTAAATGATATAAAAGTAAGGGAAATTGTGCAAATTATTTCTTGTGTAG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TAATCAGTGGAAGTGATCAAACAGCTTGAAGCAGTTTATGATGAGAAAATTTAAAATTGCAAATGACCTGAAAA 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TTTAGCCAGTCTATTCTTATTTCTTTAAATTTCAGAAATACTTAAGAAAAAAAAAAAAAAGGTCAGTATGACCT 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 CTGAGTTGCTTCCTAAAAGTAATCAGATAGTGTTCTCCCTCAGATAAGATTTCAAATTGAAAAGTATTTGACTT 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 CTTTAACTCTAGTAATTGCACTTGATTCTCTAATTCTGATCATTAAAATGACTTGGCAATATTTAATTTTGGCT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 TGCCTTTCAATCTGCATGTTTGTCTTAAATTTAGAAAAATTAAGCTCTTTACTTACTTTTATATAAAGTATTAA 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 TTGGCCAGGCATGGTGGCTTACACCTGTAATCCCAACACTTTGGGAGGCCAAGGCAGGAGAGTTGTTTGAAGCC 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 AGGAGTTTGAGACCAGCCTGGGCAACATGATGAGACCGCGTCTCTACAAAAAGTAAAATTAGCTGGGTGTGGTG 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 CTTCCAGCTACTAGGCAGCTGAGGCTAAAGGATCACTTGAGCCCAGGAGTTCGAGGCTGCAGTGAGTGATGATC 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 TTGCCACTGCACTCCAGCCTGGGAGGCAGAGCAAGAAACACCCTGTGTGAAAAAAGTATTGAATTTGTTTGATT 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 CCACTTTCAAAATATGCTCTAGATACAGGTAGTCATTCTGCCAAATTGTGTTCTTCTCTAAAACATTTTGTCCG 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 TCATTCTTTGAAACTCATTCTTAATTATTTCCACTTTACCTTCTAGTTTGGTTTGATGCCTTATATTCTTGCTA 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 GTTAAAAGCATTTTTTCCCTAGTATTTTCTGTCTTTCTAGCCTTTAAGGCATATTGTTGTTAACAAATCTCTTA 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 TTTAAGTTAATTAAAGTTTTTTCTGTGCAGCTGGGTTTTTTCTTTTACTACATGACAAGCTTCATTTTTACATT 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 TGGAAGTACATGTATATATGTTTATATATTTTTATTCTCAGGATCTATTTTCTAGGGAACTATTTTTTTAAATT 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 ATTCTTTTGTGCTGCCTTAACCCATTTATTATAGTTTGAATATTAGTAGTACTTACTACTCAAAGATTACAACT 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 ATACTAATAACTATCCTAACATACAAAGCAGACTCTCCAGGATTAAAAGTATGAGACATATAACAGAGTCTGGA 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 ATAGAATAATTCTTTTTACCCCAGTCAAGTATTTGCCTTTTGCATTATTAAGGAATCTGTTTTGTTCTTTTATT 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 GATAATTTCTATATTTTTTTCTTTGCCTTATTGCACTGGTTGGGACTTTTTGCCTTGATCCAGTTGTAGGGGGG 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 AAACATTCAGTCATTAAGCATTAAATAACTTTGTTGTTGTTGTGGGCTTGAAAAAATACCCTTTAGTAGATTGA 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 GGGTAGACTCTTTTATTTCTGCTTGTTGGAAGTTTTCTGTCAGGAACAGATGTTGAATTTTGTCAGATGCTTTT 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 TCTGCATAATTGATAGGACCTTTTTTCTCCCCTTTAGAATGTTCATATGGTGAAACATACTGATAGCTTTTCTT 4514
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4515 TTCTTTTTTTTTTGACACGGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAATGGTGCGATCTTGGCTCACTGC 4588
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4589 ACCCTCTGCCTCTTGGGTTCAAGCTTCCCTCACCAGCCTCCCAAGTACCTGGGTATACAGGTGTGCATCACCAT 4662
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4663 GCCCGGCTAATTTTTGAATTTTTAGTAGAGATAGGTTTTTACCATGTTGGCCAGGCTGGTCTTCAACTCCTGAC 4736
Query 1 ----------------ATGG------AGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCT 52
.||| ||||||..||||||||||||.||||||.|.|||||..||||||.||||
Sbjct 4737 TCAGCCTCCCAAAGTGTTGGGATTACAGTCTCGCTCTGTCGCCCAGGCTGGAGGGCAGTGGTGTGATCTTGGCT 4810
Query 53 CA--------CTGCAACCTCTGCCTCTCGAGGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATT 118
|| .|||||||||||||||.||||.|||||||||||||||||||..||||||.||||||||||.|||
Sbjct 4811 CAATGCAACCTTGCAACCTCTGCCTCCCGAGTTCAAGCGATTCTCCTGCCTTAGCCTCCTGAGTAGCTGGAATT 4884
Query 119 ACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCA 192
||||||.|||||.||.|..|||.|| ||.||||||||||||||||||||||||.||||||||||||||||||
Sbjct 4885 ACAGGCGCACGCCACTACACCCAGC---TTCTTTTTGTATTTTTAGTAGAGATGGAGTTTCACCATGTTGGCCA 4955
Query 193 GGCTGGTCTCGAACTCCTGACCTCAAG----------------------------------------------- 219
.|||||||||||||||||||.|||..|
Sbjct 4956 AGCTGGTCTCGAACTCCTGAGCTCCGGTGATCCACCCGCCTTTACAGGCATGAGCCACCGTGCCCGGCTGCATT 5029
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5030 TCTCTTTTGTAAGAACCTGCTCTGGTTTATTGATATTTTGCTGTTTTTCTGTTTTAAGTTTCATTAATTTCTGA 5103
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5104 TCTTTAGTATTTTCTCCTTTCTTTGCTTTGGGCTTATTTGCTCCCTTTTCTAGCTTATTGTGGCGGAAGCTCAG 5177
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5178 ATCATTGATTTTAAAATTTACTTATTTATTTATTTATTTATTTAATTCAACACTGATCAGAAGGCTTTTTGTGC 5251
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5252 TTTTCTAAAAAAAGCATTTAATGCTATAAATTTCCCATTTGCTTTATCTCACAAATTTTATTGTGTTGTAATTT 5325
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5326 TGTGTTCAATTTAGAATATTCTGATTTTTCTTGGTATTACTATAATTTTCAAATATTTAGAGTTTTTTTCAGTT 5399
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5400 ATCTTTCTGTTACTGATTGTAATTTATTGTTTTTTAAAATTATAGTTCTTTGAATAGTTTTGCAGTATTTGCTC 5473
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5474 TAGGGATTACTATAAACATACTTCACTTTTTACAGTTCACTTAGAAGTCAATATTTTACCAGTTCAAGTGGAAT 5547
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5548 GTAGAAAAATCTTACCACTGTTTACATTCCTTTACCCTCTCCCCTTTATGTTATAATTTTCTTATAAATCATAA 5621
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5622 GACTTGGCTGGGCACAGTGGCTCACCTGTAATCCCAGGACTGGGAGGCCGAGGCGAGCAGATTGCTTAAGTCCA 5695
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5696 GGAGTTCGAGACCAGCCTGGACAATGTGGTGAAACCCCAACTCTACAAAAAATACACAAAATTAGCTAGGCGTG 5769
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5770 GTAGCATGTTCCTGTAGTCCCAGCTACTCAGGAGGCTGAAGTGGGAGGATTACTTGAGCCCAGGAGGCAGAGGT 5843
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5844 TGCAGTGAGCCAAGATCACTCCACTCCACTCCAGCCTGAGTGACAGAGCTAGACACTGTGTCTCAAAAAATAAA 5917
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5918 AATAAAAAATAAGACTCATCAGATAATGTATTTTTTCCTTACAACTATCATAGATATTTTTAAGAACCCAAGAG 5991
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5992 GAAAACAGTCTATCACATTTACCACAATATTTATCATTTGTATTAATCTTCCTTAATTCTTGATGTTCCAAGTT 6065
Query 220 -------------------------------------------------------------------------- 219
Sbjct 6066 TACATAGGTATCAGTCCTTTTCATCTGGAAAATTTCTTTTAGTGCAGGTCTGTTGACATTTAATTCTCTTATTT 6139
Query 220 -------------------------------------------------------------------------- 219
Sbjct 6140 TTTCTTCATCTGAGAATGTCTTTATTTTGCCTTAATTCATGAAAGATATTTTTGCTGGATATAAACTACTGTGT 6213
Query 220 -------------------------------------------------------------------------- 219
Sbjct 6214 TGACAGTTCTTTCAGCCTCCATGGTTTCTGATGAGAAATGTGCAGCCATTAAAGTAATATTTCCCCTGTATGAA 6287
Query 220 -------------------------------------------------------------------------- 219
Sbjct 6288 ACATGTTATTTTTCTCTGAGTATTTTCAGGAATCTTTGTCTTTGGTTTTTATTGGTTTGATTATGATGTGCCCG 6361
Query 220 -------------------------------------------------------------------------- 219
Sbjct 6362 GGTGTTTGAATTTATTCTCTTTGGGATTTGTTGAGCTTAAATGTGTAAGTTTATGCCTTTCATCAGATTATGTA 6435
Query 220 -------------------------------------------------------------------------- 219
Sbjct 6436 AAGTTTTAAACCATTCAGATATTTTCTGCTCTACTTTCTCCTCCCTCTTAGGCTCCAGTGATGCAAGTGTTAGA 6509
Query 220 -------------------------------------------------------------------------- 219
Sbjct 6510 CTCTTTGGTATTATCTCACAGATCTCAGAACCTCTGTTCATTTATTTTATTTTAATAAATCATTTCAGTTAACA 6583
Query 220 -------------------------------------------------------------------------- 219
Sbjct 6584 AAATCATATATTGTATGCAGCATGATGTTTCAATATGTATGTTCACATTGTAGGATGTCTAAAGTAAAGATAAT 6657
Query 220 ----------- 219
Sbjct 6658 GAACATATGCA 6668
