Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12783
- Subject:
- NR_146617.1
- Aligned Length:
- 2542
- Identities:
- 186
- Gaps:
- 2331
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AATGATCATACAGTCTTAGAGCAAATGAAAGTAGCAGTTGTCCAGAGGGGGCTTGGGCCAGCCATCCGGCTGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAGACCTTCAGTAGGCTCAGAACAGCTGCGCTCATTCACTCACTGTTCCACTTTCTTGTAATGCCTGCACCAGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CACAGTGTGGACTGGGGACCAGACGCAGATGCCCTGGCTGTCCTTGGCGGGCCTGGAAAGAGTGGAGCCCCAAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTGCCGGCTGGCAAACCTCCAGCTGTGGCCCGTGGGGTTTGCTCCATGGTGGCCTGGGCCACGCAGGCTGTACC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGCCATGAGATGCCATGGAGCCAAAGGCTGCGACTGTAGCTGTTTGTGCTGCAGCCAACCTTTACCCAGTTCCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GACTGCTGTTTGTTTGGTTTGCCATGGGTACTTCTGGGGACCTCCTGGCAGCATGCTGGCCCGTGCAACTCTCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCATGCCAGTTGTAGGGTCCCTGTTCCTGTTTGGCCAAGGAAGGGATTTCCTAAGTGTATACATATTTATTTAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTTTGCCATGTTTTGGATGGCCTTGGACATAGAAACTCATTGCACATTAGTTAAATAACTAGGCCAGCATTCTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AAAGACCCGACTCCAGACCTACTTCGGTGATGGAGATGGGCACATGCAGGGTCAGGGTGCTTTGAAAGAGTCAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ACATTCACCTTCCAACAGAGCAGCCTGAGGCTTCCCTAGTCTTGCAGGGTCAACTTGCTGAAAGCTCAGCCCTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGCCCCAAAGGAGCTCTGAGGCCGCAGGCCCAGAGCCCCGATGTCCCCGTGAGCTGGTGGCAGGGAAGCGGAAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAGGCTTTCACACCGCCTCCCCCACATATGCTCACAGCCTCCCCTGGGCCCTTTCTTGCCTCTCACATGGCCAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCTGTGGGTTCTTTGGCCTGGGAGGTGCTGCTTCAGCCTCCCTCGGCCTTGAGGTGCTCCAAGACAGCGTCAGC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ACCTGGGCTAGAGGTCCGTGCTGCCCTGTGCATCCTCAGAGTTTGACTGTAGTGTGCATGTGTGCATGCATGTG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CGTGTGTGTGCATGTGTGTGCTTGTGTATATGTGTGCATGTGTGTGCTTGTGTGCATGTGTGCATGCGCATGTA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TGCGTGCGCACCGTTATTTTCTAATGGACTGTGCAGGCATCTGTTCTCCTCATGGACCAGGAACTCAGTGATCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GGGACTCCCCTGTTTACTTTGATATTCCAGCTGCCCTCCAGAGCGCCTAGCACATAGTAGGTCTTCAGTGACTG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCAGATGAGAGGATATTTAAATGAGACGGCAGCTTTGGAGGGATGACAACAGATTGTGGTCTAATCTCACGATT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TTTGCCTGAGAGAGAATTGGCCCTACTCGAGGCGGGCTTTTTTTTTCTTTTCTTTTCTTTTCTTTTTTTTTTGA 1406
Query 1 -ATGGAGTCTCATTC-TGTCGCCCAGACTGGAGTGAAGTGGCATG--ATCTCGGCTCACTGCAACCTCTGCCTC 70
|||||||.|||.|| |||.|||||..||||||||.|.||| || |||||.||||||||||||.||||||||
Sbjct 1407 GATGGAGTTTCACTCTTGTTGCCCACGCTGGAGTGCAATGG--TGCAATCTCAGCTCACTGCAACGTCTGCCTC 1478
Query 71 TCGAGGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCT 144
.||.|.|||||||||||||||||||||||||||.||.||||||||||||||||||...||.|| |.||||||.
Sbjct 1479 CCGGGTTCAAGCGATTCTCCTGCCTCGGCCTCCTGATTAGCTGGGATTACAGGCATGTGCCAC--TACCCGGCC 1550
Query 145 AATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAA 218
|| ||||||||||||||||||||.||||.|||.|||||||||.|||||||||||.||||||||||||||||
Sbjct 1551 AA----TTTTGTATTTTTAGTAGAGACGGGGCTTCTCCATGTTGGTCAGGCTGGTCTGGAACTCCTGACCTCAA 1620
Query 219 G------------------------------------------------------------------------- 219
|
Sbjct 1621 GTGATCCACCTGCCTCGGCCTCCCGAAATGCTGGGATTACAGGCATGAGCCACTGCGCCAGGCCAAGGCGGGCT 1694
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1695 TTATTTGTGTCTGTTGGACACCTCACATGGCACCTCACAGGGCGCTGGTTTATAAAGACCCAAACCAGTGTCGA 1768
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1769 GTTCCATGCTGGCCCCGGCGTCTGCTGTGTGCTTTCGCTGTGTGTATACATGCGGAAGTTCATTCCGGAGGCTT 1842
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1843 CCAGGGTAGCCTCCCGGGTGCTGCAGCGGGTCTCCCGCTCATCACTACTCTGTACACAATGTCTTGATACGCTG 1916
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1917 AGGATTGAAATGGAGCAGTGATCCTGCCTCAAGGTAGACAGCAAAACCCAGGCTATGTGGGAGTCAGTGTGGTA 1990
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1991 GGACTGAGGGCGTGCCTGAGGGACGGATGCAGGGGCAGAGAGAGCAGCAGGTGAAGGCTGGGCCTCCTGCTGAA 2064
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2065 AGCCGGTATTGCTGAGACTCCAGGGTCAGCCTTCCAGCTCCTCCTCCTGACTGACCGCTGGCAATGTAGGGGTG 2138
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2139 ACTGTCCCAGCCTCCTGCTGCAGGGCGCTCTGCCGTCAGTAGAGAATCCTCCTCTGTCCCCGCGGTCCCCTCCC 2212
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2213 CGCTGAACAGCCTGGATCCTGCTTTCACAGGGACATGCGTGAAATGGGTCCTGCGCCGTAATTACTCCTGCTGG 2286
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2287 AGACCGGGATTGCAAAGATGACTGTCATGTTGTCTCGTGCATCTTACATCTTTTACTGTGATTAAAAATAAATG 2360
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2361 TCGTGGGGTTCACGTCCCACAGACCCTTATGTACTGCAGAGGTCAAACTGGGGCGGGTTTCTCACACGCGTCAT 2434
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2435 CACGCGAGGCCAGTGTCCGTCGGGGTGTGTGTCTACAAGCACGGGGCTTCGTGGCCTATCTTTATGAACCCTCC 2508
Query 220 -------------------------- 219
Sbjct 2509 AGGGTGATGTGAAGCCAGCCACAAAC 2534
