Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12783
Subject:
NR_146617.1
Aligned Length:
2542
Identities:
186
Gaps:
2331

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AATGATCATACAGTCTTAGAGCAAATGAAAGTAGCAGTTGTCCAGAGGGGGCTTGGGCCAGCCATCCGGCTGGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GAGACCTTCAGTAGGCTCAGAACAGCTGCGCTCATTCACTCACTGTTCCACTTTCTTGTAATGCCTGCACCAGT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CACAGTGTGGACTGGGGACCAGACGCAGATGCCCTGGCTGTCCTTGGCGGGCCTGGAAAGAGTGGAGCCCCAAG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TTGCCGGCTGGCAAACCTCCAGCTGTGGCCCGTGGGGTTTGCTCCATGGTGGCCTGGGCCACGCAGGCTGTACC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AGCCATGAGATGCCATGGAGCCAAAGGCTGCGACTGTAGCTGTTTGTGCTGCAGCCAACCTTTACCCAGTTCCT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GACTGCTGTTTGTTTGGTTTGCCATGGGTACTTCTGGGGACCTCCTGGCAGCATGCTGGCCCGTGCAACTCTCC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TCATGCCAGTTGTAGGGTCCCTGTTCCTGTTTGGCCAAGGAAGGGATTTCCTAAGTGTATACATATTTATTTAG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CTTTGCCATGTTTTGGATGGCCTTGGACATAGAAACTCATTGCACATTAGTTAAATAACTAGGCCAGCATTCTG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AAAGACCCGACTCCAGACCTACTTCGGTGATGGAGATGGGCACATGCAGGGTCAGGGTGCTTTGAAAGAGTCAC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  ACATTCACCTTCCAACAGAGCAGCCTGAGGCTTCCCTAGTCTTGCAGGGTCAACTTGCTGAAAGCTCAGCCCTT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GGCCCCAAAGGAGCTCTGAGGCCGCAGGCCCAGAGCCCCGATGTCCCCGTGAGCTGGTGGCAGGGAAGCGGAAA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  AAGGCTTTCACACCGCCTCCCCCACATATGCTCACAGCCTCCCCTGGGCCCTTTCTTGCCTCTCACATGGCCAT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CCTGTGGGTTCTTTGGCCTGGGAGGTGCTGCTTCAGCCTCCCTCGGCCTTGAGGTGCTCCAAGACAGCGTCAGC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  ACCTGGGCTAGAGGTCCGTGCTGCCCTGTGCATCCTCAGAGTTTGACTGTAGTGTGCATGTGTGCATGCATGTG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CGTGTGTGTGCATGTGTGTGCTTGTGTATATGTGTGCATGTGTGTGCTTGTGTGCATGTGTGCATGCGCATGTA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TGCGTGCGCACCGTTATTTTCTAATGGACTGTGCAGGCATCTGTTCTCCTCATGGACCAGGAACTCAGTGATCA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GGGACTCCCCTGTTTACTTTGATATTCCAGCTGCCCTCCAGAGCGCCTAGCACATAGTAGGTCTTCAGTGACTG  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  CCAGATGAGAGGATATTTAAATGAGACGGCAGCTTTGGAGGGATGACAACAGATTGTGGTCTAATCTCACGATT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TTTGCCTGAGAGAGAATTGGCCCTACTCGAGGCGGGCTTTTTTTTTCTTTTCTTTTCTTTTCTTTTTTTTTTGA  1406

Query    1  -ATGGAGTCTCATTC-TGTCGCCCAGACTGGAGTGAAGTGGCATG--ATCTCGGCTCACTGCAACCTCTGCCTC  70
             |||||||.|||.|| |||.|||||..||||||||.|.|||  ||  |||||.||||||||||||.||||||||
Sbjct 1407  GATGGAGTTTCACTCTTGTTGCCCACGCTGGAGTGCAATGG--TGCAATCTCAGCTCACTGCAACGTCTGCCTC  1478

Query   71  TCGAGGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCT  144
            .||.|.|||||||||||||||||||||||||||.||.||||||||||||||||||...||.||  |.||||||.
Sbjct 1479  CCGGGTTCAAGCGATTCTCCTGCCTCGGCCTCCTGATTAGCTGGGATTACAGGCATGTGCCAC--TACCCGGCC  1550

Query  145  AATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAA  218
            ||    ||||||||||||||||||||.||||.|||.|||||||||.|||||||||||.||||||||||||||||
Sbjct 1551  AA----TTTTGTATTTTTAGTAGAGACGGGGCTTCTCCATGTTGGTCAGGCTGGTCTGGAACTCCTGACCTCAA  1620

Query  219  G-------------------------------------------------------------------------  219
            |                                                                         
Sbjct 1621  GTGATCCACCTGCCTCGGCCTCCCGAAATGCTGGGATTACAGGCATGAGCCACTGCGCCAGGCCAAGGCGGGCT  1694

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1695  TTATTTGTGTCTGTTGGACACCTCACATGGCACCTCACAGGGCGCTGGTTTATAAAGACCCAAACCAGTGTCGA  1768

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1769  GTTCCATGCTGGCCCCGGCGTCTGCTGTGTGCTTTCGCTGTGTGTATACATGCGGAAGTTCATTCCGGAGGCTT  1842

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1843  CCAGGGTAGCCTCCCGGGTGCTGCAGCGGGTCTCCCGCTCATCACTACTCTGTACACAATGTCTTGATACGCTG  1916

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1917  AGGATTGAAATGGAGCAGTGATCCTGCCTCAAGGTAGACAGCAAAACCCAGGCTATGTGGGAGTCAGTGTGGTA  1990

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1991  GGACTGAGGGCGTGCCTGAGGGACGGATGCAGGGGCAGAGAGAGCAGCAGGTGAAGGCTGGGCCTCCTGCTGAA  2064

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2065  AGCCGGTATTGCTGAGACTCCAGGGTCAGCCTTCCAGCTCCTCCTCCTGACTGACCGCTGGCAATGTAGGGGTG  2138

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2139  ACTGTCCCAGCCTCCTGCTGCAGGGCGCTCTGCCGTCAGTAGAGAATCCTCCTCTGTCCCCGCGGTCCCCTCCC  2212

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2213  CGCTGAACAGCCTGGATCCTGCTTTCACAGGGACATGCGTGAAATGGGTCCTGCGCCGTAATTACTCCTGCTGG  2286

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2287  AGACCGGGATTGCAAAGATGACTGTCATGTTGTCTCGTGCATCTTACATCTTTTACTGTGATTAAAAATAAATG  2360

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2361  TCGTGGGGTTCACGTCCCACAGACCCTTATGTACTGCAGAGGTCAAACTGGGGCGGGTTTCTCACACGCGTCAT  2434

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2435  CACGCGAGGCCAGTGTCCGTCGGGGTGTGTGTCTACAAGCACGGGGCTTCGTGGCCTATCTTTATGAACCCTCC  2508

Query  220  --------------------------  219
                                      
Sbjct 2509  AGGGTGATGTGAAGCCAGCCACAAAC  2534

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